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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00035931 ID=TCONS_00035931|Name=TCONS_00035931|organism=Clytia hemisphaerica|type=transcript|length=312bp
CATTTTTATGTACTCAAAtccaaaatttaaatcaaagaaaaggGATGCAG
AAGGAAGCAAAAAAGAATCAAACAGCGGGAACATTCGAATGAGAAATGGT
GCAAATTATAAAGAACTCCTATTTACCGAAATGTTGCACTGCTGAATGAG
AAATTactttttatcaaaagGGCAAAATTAAAGTAAAGTCAACAAGTCGC
TTCCAATCAGCATTGGTAATGATGGCACGAACAGGCtgaaatcattttca
aagaaataaaacttgaaatttccaattGCTTCTTTCTATTCATCAATGTT
TTACTGTTATCT Run BLAST on NCBI transcript from alignment at sc0001389:62197..63414+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00035931 ID=TCONS_00035931|Name=TCONS_00035931|organism=Clytia hemisphaerica|type=transcript|length=1218bp|location=Sequence derived from alignment at sc0001389:62197..63414+ (Clytia hemisphaerica)
CATTTTTATGTACTCAAAtccaaaatttaaatcaaagaaaaggGATGCAG
AAGGAAGCAAAAAAGAATCAAACAGTAAGTTATTTCTACCGAGTTCAACG
TCCTGTTCCACTGACTCTGTGAAAGCAAGGGCTTACAAAATCTTTAGGTC
TTTCAAGAGAATTGGCTATCAAGGAAACATATTCGTCCTCCCTTGTGCAA
AGTCTCACTCGTCTTTAGgagaaaaaaagttaattttgggATGGCAAGGG
ATGGCAAGTTGTCAAGAGGGGTGTcagaattttatattttgtcgTGATTT
ACTGTAGGTTGTTTTATGGATATTCTCTGCCTGTCTTGAGAAATCTTGAG
GCCTAAGATTCGGTTAAAATGGGCTTAANGATGGCAAGTTGTCAAGAGGG
GTGTcagaattttatattttgtcgTGATTTACTTTAGGTTGTTTTATGGA
TATTCTCTGCCTGTCTTGAGAAAGTCGTGCAAACACCcgatttcctaaga
aaatagacaaaattcCTCAAAAAAACGGTGAAAAAAAGATAAtggaaaga
atatttttaggcttaaaactcacatccggaggcttcaaaaattggatatt
cttaaaaaaacatttagacgGAGACTTGAAGTTTTAATGTTGCTTTTTAT
CCTCAAAACCAGTGCGGTAGTATAATAAGTTAGTCTTTAGTTGTTAGCTT
AATATTGATACTTTTTCATTTAAACTTTAGGCGGGAACATTCGAATGAGA
AATGGTGCAAATTATAAAGAACTCCTATTTACCGAAATGTTGCACTGCTG
AATGAGAAATTactttttatcaaaagtaagaactttattattctaaattt
tacaTTGAGATAGATACACCAAATGTATTTGACTGAAAATGTTTTCCTTA
ATGGTAATAAAGATTGTCTTCCAGGGAATAAAGTTTATTTtgagctaaaa
tttgactttcatCTCTAGAATGGCTCGAAAAAAATACTGTAgagatttta
aattctttttgtttgagAAATGTTAAATTTCattatataattttaatttt
tataatgtTTGATTTTCTCTTTACAGGGCAAAATTAAAGTAAAGTCAACA
AGTCGCTTCCAATCAGCATTGGTAATGATGGCACGAACAGGCtgaaatca
ttttcaaagaaataaaacttgaaatttccaattGCTTCTTTCTATTCATC
AATGTTTTACTGTTATCT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00035931-exon-sc0001389-1491911889:62197..62270 | TCONS_00035931-exon-sc0001389-1491911889:62197..62270 | Clytia hemisphaerica | exon |
| TCONS_00035931-exon-sc0001389-1510915933:62197..62270 | TCONS_00035931-exon-sc0001389-1510915933:62197..62270 | Clytia hemisphaerica | exon |
| TCONS_00035931-exon-sc0001389-1575043694:62197..62270 | TCONS_00035931-exon-sc0001389-1575043694:62197..62270 | Clytia hemisphaerica | exon |
| TCONS_00035931-exon-sc0001389-1491911889:62927..63022 | TCONS_00035931-exon-sc0001389-1491911889:62927..63022 | Clytia hemisphaerica | exon |
| TCONS_00035931-exon-sc0001389-1510915933:62927..63022 | TCONS_00035931-exon-sc0001389-1510915933:62927..63022 | Clytia hemisphaerica | exon |
| TCONS_00035931-exon-sc0001389-1575043694:62927..63022 | TCONS_00035931-exon-sc0001389-1575043694:62927..63022 | Clytia hemisphaerica | exon |
| TCONS_00035931-exon-sc0001389-1491911889:63273..63414 | TCONS_00035931-exon-sc0001389-1491911889:63273..63414 | Clytia hemisphaerica | exon |
| TCONS_00035931-exon-sc0001389-1510915933:63273..63414 | TCONS_00035931-exon-sc0001389-1510915933:63273..63414 | Clytia hemisphaerica | exon |
| TCONS_00035931-exon-sc0001389-1575043694:63273..63414 | TCONS_00035931-exon-sc0001389-1575043694:63273..63414 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0001389 | supercontig | sc0001389:62197..63414 + |
Blast
The following BLAST results are available for this feature:
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