TCONS_00035903 (transcript) - C. hemisphaerica

Overview
NameTCONS_00035903
Unique NameTCONS_00035903
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length225

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00035903 ID=TCONS_00035903|Name=TCONS_00035903|organism=Clytia hemisphaerica|type=transcript|length=225bp
CACCCTTCACTAACGAGTACACGTGGAAGATTTATAATTATCAAAAGAGG
ATTGAAAGGTCTGAGTATGACTCTGACTACATGCTCACTAGATGCTTTTA
TACACTGAAAGGACATAAATCAAAGGTCAATTTTTACCCTAACGATTACA
AAGATCTGGTCAATTCACACGCTGCGATATATTTTCAATCGGATGAAGGT
AGTTTTGACGACACCTTAAAATGGC
Run BLAST on NCBI

transcript from alignment at sc0001386:23692..23916

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00035903 ID=TCONS_00035903|Name=TCONS_00035903|organism=Clytia hemisphaerica|type=transcript|length=225bp|location=Sequence derived from alignment at sc0001386:23692..23916 (Clytia hemisphaerica)
GCCATTTTAAGGTGTCGTCAAAACTACCTTCATCCGATTGAAAATATATC
GCAGCGTGTGAATTGACCAGATCTTTGTAATCGTTAGGGTAAAAATTGAC
CTTTGATTTATGTCCTTTCAGTGTATAAAAGCATCTAGTGAGCATGTAGT
CAGAGTCATACTCAGACCTTTCAATCCTCTTTTGATAATTATAAATCTTC
CACGTGTACTCGTTAGTGAAGGGTG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_021083XLOC_021083Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00035903-exon-sc0001386-1491911889:23692..23916TCONS_00035903-exon-sc0001386-1491911889:23692..23916Clytia hemisphaericaexon
TCONS_00035903-exon-sc0001386-1510915933:23692..23916TCONS_00035903-exon-sc0001386-1510915933:23692..23916Clytia hemisphaericaexon
TCONS_00035903-exon-sc0001386-1575043694:23692..23916TCONS_00035903-exon-sc0001386-1575043694:23692..23916Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0001386supercontigsc0001386:23692..23916 .
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0	1.11532	0	0	0	0	4.41133	1.37661	0.963798	2.38764	5.79375	0.761717	6.84592	5.52966	12.9889	10.4543	2.57578	10.5604	8.51066	3.81677	3.31747	0	2.62275	2.38446	9.82377	4.38374	4.70484	1.67371	1.26945	5.17347
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00035903 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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