TCONS_00035877 (transcript) - C. hemisphaerica

Overview
NameTCONS_00035877
Unique NameTCONS_00035877
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length120

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00035877 ID=TCONS_00035877|Name=TCONS_00035877|organism=Clytia hemisphaerica|type=transcript|length=120bp
ATTTTATAAGATAATGtatattgaaattccaatataaaataaacatttcT
TTTATTACAATATAAGTATTCTTTTGGtatattcaaaaaaatatttaaaa
tactAAATAATATTGATNTG
Run BLAST on NCBI

transcript from alignment at sc0001381:41813..41932

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00035877 ID=TCONS_00035877|Name=TCONS_00035877|organism=Clytia hemisphaerica|type=transcript|length=120bp|location=Sequence derived from alignment at sc0001381:41813..41932 (Clytia hemisphaerica)
CANATCAATATTATTTagtattttaaatatttttttgaatataCCAAAAG
AATACTTATATTGTAATAAAAgaaatgtttattttatattggaatttcaa
tataCATTATCTTATAAAAT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_021066XLOC_021066Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00035877-exon-sc0001381-1491911889:41813..41932TCONS_00035877-exon-sc0001381-1491911889:41813..41932Clytia hemisphaericaexon
TCONS_00035877-exon-sc0001381-1510915933:41813..41932TCONS_00035877-exon-sc0001381-1510915933:41813..41932Clytia hemisphaericaexon
TCONS_00035877-exon-sc0001381-1575043694:41813..41932TCONS_00035877-exon-sc0001381-1575043694:41813..41932Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0001381supercontigsc0001381:41813..41932 .
Expression
No biomaterial libraries express this feature.
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00035877 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
back to top