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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00035875 ID=TCONS_00035875|Name=TCONS_00035875|organism=Clytia hemisphaerica|type=transcript|length=662bp
NNAGTTACGTAAGATCGCATAGAAGAAGAAGGAAAGCAATAGATTATATT
ATGAGGCTCAAACTGCAGTTTTCTTAAGAAACACTTTGGAACTTGCTGGC
GTCAATGTCACTCAAACTCAAAGACATGGTGTAGATTGTCAGACAAAGCC
AGAGGTGACCAATTCTTTACTTGTCTATATGATTCAGATTGTGCACACGC
TAGAGTAATAGGATTGTTAGGAAAACCTGCTGAGGAGGTTTGCGAAATGA
AATATTCTGCTCTTGGCTCCGGGCCAATATGTCATGGATCAAATCCCTTA
ACTGcttaagatgaaaaaaaattaaatttgtcaaTGGTCAAGGATAGTGT
GAAACAAGTTTCTCCTGGAATCATGTATTATATACGATTTTATAAGTTAC
ACCGCAATAATTTTGTCGATNTTCTGCTCTTGGCTCCGGGCCAATATGTC
ATGGATCACATCCCTTAACTGctttaagatgaaaaaaaattgaatttgtc
aaTGGTCATGGATAGTGTGAAACAAGTTTCTCCTGGAATCATGTATTATA
TACGATTTTATAAGTTACACAACAATTTTgtcgattttcttttgtttaat
ttcaagtgtttctttgtaatttttgaaaaataacttttttaaatatttgt
ttAATATTCTAT Run BLAST on NCBI transcript from alignment at sc0001381:59862..60730- Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00035875 ID=TCONS_00035875|Name=TCONS_00035875|organism=Clytia hemisphaerica|type=transcript|length=869bp|location=Sequence derived from alignment at sc0001381:59862..60730- (Clytia hemisphaerica)
NNAGTTACGTAAGATCGCATAGAAGAAGAAGGAAAGCAATAGATTATATT
ATGAGGCTCAAACTGCAGTTTTCTTAAGAAACACTTTGTGAGTGGCAATA
ACAGTTTAAACGATGTGTAAGAAGTTAAAATTCGACATTATAACAAGACT
ACTTTAAAACACTCGCAAATAATTTCACGAAATTTAAGCATTCATATAAT
TCCTGTAACTTTAGGGAACTTGCTGGCGTCAATGTCACTCAAACTCAAAG
ACATGGTGTAGATTGTCAGACAAAGCCAGAGGTGACCAATTCTTTACTTG
TCTATATGATTCAGATTGTGCACACGCTAGAGTAATAGGATTGTTAGGAA
AACCTGCTGAGGAGGTTTGCGAAATGAAATATTCTGCTCTTGGCTCCGGG
CCAATATGTCATGGATCACATCCCTTAACTGCTNTGCTGAGGAGGTTTGC
GAAATGAAATATTCTGCTCTTGGCTCCGGGCCAATATGTCATGGATCAAA
TCCCTTAACTGCTTAAGATGAAAAAAAATTAAATTTGTCAATGGTCAAGG
ATAGTGTGAAACAAGTTTCTCCTGGAATCATGTATTATATACGATTTTAT
AAGTTACACCGCAATAATTTTGTCGATNTTCTGCTCTTGGCTCCGGGCCA
ATATGTCATGGATCACATCCCTTAACTGCTTTAAGATGAAAAAAAATTGA
ATTTGTCAATGGTCATGGATAGTGTGAAACAAGTTTCTCCTGGAATCATG
TATTATATACGATTTTATAAGTTACACAACAATTTTGTCGATTTTCTTTT
GTTTAATTTCAAGTGTTTCTTTGTAATTTTTGAAAAATAACTTTTTTAAA
TATTTGTTTAATATTCTAT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00035875-exon-sc0001381-1575043694:60644..60730 | TCONS_00035875-exon-sc0001381-1575043694:60644..60730 | Clytia hemisphaerica | exon |
| TCONS_00035875-exon-sc0001381-1575043694:60367..60516 | TCONS_00035875-exon-sc0001381-1575043694:60367..60516 | Clytia hemisphaerica | exon |
| TCONS_00035875-exon-sc0001381-1575043694:59862..60286 | TCONS_00035875-exon-sc0001381-1575043694:59862..60286 | Clytia hemisphaerica | exon |
| TCONS_00035875-exon-sc0001381-1510915933:60644..60730 | TCONS_00035875-exon-sc0001381-1510915933:60644..60730 | Clytia hemisphaerica | exon |
| TCONS_00035875-exon-sc0001381-1510915933:60367..60516 | TCONS_00035875-exon-sc0001381-1510915933:60367..60516 | Clytia hemisphaerica | exon |
| TCONS_00035875-exon-sc0001381-1510915933:59862..60286 | TCONS_00035875-exon-sc0001381-1510915933:59862..60286 | Clytia hemisphaerica | exon |
| TCONS_00035875-exon-sc0001381-1491911889:60644..60730 | TCONS_00035875-exon-sc0001381-1491911889:60644..60730 | Clytia hemisphaerica | exon |
| TCONS_00035875-exon-sc0001381-1491911889:60367..60516 | TCONS_00035875-exon-sc0001381-1491911889:60367..60516 | Clytia hemisphaerica | exon |
| TCONS_00035875-exon-sc0001381-1491911889:59862..60286 | TCONS_00035875-exon-sc0001381-1491911889:59862..60286 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0001381 | supercontig | sc0001381:59862..60730 - |
Blast
The following BLAST results are available for this feature:
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