TCONS_00035862 (transcript) - C. hemisphaerica

Overview
NameTCONS_00035862
Unique NameTCONS_00035862
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1856

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00035862 ID=TCONS_00035862|Name=TCONS_00035862|organism=Clytia hemisphaerica|type=transcript|length=1856bp
CAGTCATGCACAAATCACCGAATTTTAGAAATGTTTAGCCAAATAGGAAC
CATTTCAGCAAACTTAGGTTATGGTTTCGGAATAATAGAGCTCTAGTAAT
GTGTATGTTTAAccatatctttattttttagataacaactaaaacaaaaa
aaacacacaaTAGAAATGGATTTGTTTAGCGATTTCAACGATCAGAAATG
GGACGATAAAGGAACCGCCCCTGAAAACATCAAAAGTTTAGAGGGATACA
AGAAAGTGGACATCATGCGAGGAGGACAAGAAGAAGAGTTGGGTGAAAAG
GTTTTCCATTACTACATGTCCGATGCAGGTGGTGACCCAGTGTCCGCTAA
ACTGTTCGGAGCTTGTCGAAACCCTTTGAAGAGTATTGGGCATTGTAGTA
TGAAGATCATCGTAAAGAATTACGAACCTCTCGTCGTTGGTATTATCGTT
GAAGATGATTGGGTGGAAATCAAACAAAGCTATTTGGATAGTTTGAACGT
ACAAGGAGAACCACCAAAAGAACCTGAAGTCGTTGACATGAACGAAGTAA
TCGGACTCGTTGCAGACTTGGATCACGATATATGGTGCAACAAAGGTGAC
CCACCAAGAAACAAAACCAAAATAGGTTACGTTTTTGTAAGCGTTGTACG
TCCCACCGACAAAGGAAACAATACGTTTGATTATCAGCTGAGCGACGATC
AAAATGGCCGATCACTAAGTGCGACGTTGTCTGGATGCCGAAGAAATCCG
TTACGCGATGTCGTGAATTGTtttatgaagattgaaaataacCAAGTGAA
AGGAATTATTGTTGAAGACGATTGGGTGGAAGTTAAATAAACGCCCTCAA
TTCTACGCTCTCGTAATTCCCGCCCGATATattatttcttgattttctta
atATAAAACAATTTCTAGTGAACTATACACAACGCCATCGAACATGTTTT
AGTTCAACAATCTAGAAATTGTTTTTTAGACCGCGTTTTATTCATAAACG
AAAAGTAGAAAGATTACTGTTGGAAACATTTCCGCTTAGAATCCCGAGCA
AACAGTCTTGTGTGAACTTCTTAGTTagcttttttttgttgaaattgggT
CAACTTTGGGGTATAGGGAACATGGGGAAAAGGAATTTAATATTGTATAA
ATTATGTAtatcaacatttttttattttcttcaattttaatgCCTCTTTT
ATCAATCGTTTTAATTAATTCGAATTCTAAATCCGAAGCGTAGcttcaat
cttttttgaaaCACTTCACAAACAATAAAAGTGTTCAATCTCAGTAGAAT
CTCTTAGATCTAATAACACGTTAATTGTTTGAATAACGGGTTGATGGAGA
GAGGTAATTCTTAAATGATAGTGTTTTTCTTGTGAAGATTATAAAATGTG
ATCTTCAGATAAGGCAATTCGTTGCTTTTCATCATTTATGCCGGACATTG
AATGTGGTGTGATGATGGTACTCATATGTTCAGTACCTGGGAGAATACAA
GGTTCTCCTGTACTGTGCAagtatcatcatcgatacagcaCTGCTCTGAT
GTGACGCgagcacagagtacaatgtctggtagcactgtgatttccctatc
taggGGTAGAAAACTATTCCGAGATAGGGCCCGGTccgatgatatcggag
ggtccgcttctctctcttctctctatttttctctttgtcaaatcttgttt
atttttctaattcTTCTTTCTAATTTGTGTAAACAATCAATCTATATTAT
TTAGtatcttaaatatttttttgaatataCCAAAAGAATACTTATATTGT
AATAaaggaaatgtttattttatattGCAATTTCAATATACATTATCTTA
TAAAAT
Run BLAST on NCBI

protein sequence of TCONS_00035862-protein

>TCONS_00035862-protein ID=TCONS_00035862-protein|Name=TCONS_00035862-protein|organism=Clytia hemisphaerica|type=polypeptide|length=224bp
MDLFSDFNDQKWDDKGTAPENIKSLEGYKKVDIMRGGQEEELGEKVFHYY
MSDAGGDPVSAKLFGACRNPLKSIGHCSMKIIVKNYEPLVVGIIVEDDWV
EIKQSYLDSLNVQGEPPKEPEVVDMNEVIGLVADLDHDIWCNKGDPPRNK
TKIGYVFVSVVRPTDKGNNTFDYQLSDDQNGRSLSATLSGCRRNPLRDVV
NCFMKIENNQVKGIIVEDDWVEVK
Run BLAST on NCBI

transcript from alignment at sc0001381:34037..41693+

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00035862 ID=TCONS_00035862|Name=TCONS_00035862|organism=Clytia hemisphaerica|type=transcript|length=7657bp|location=Sequence derived from alignment at sc0001381:34037..41693+ (Clytia hemisphaerica)
CAGTCATGCACAAATCACCGAATTTTAGAAATGTTTAGCCAAATAGGAAC CATTTCAGCAAACTTAGGTTATGGTTTCGGAATAATAGAGCTCTAGTAAT GTGTATGTTTAAccatatctttattttttagataacaactaaaacaaaaa aaacacacaaTAGAAATGGATTTGTTTAGCGATTTCAACGATCAGAAATG GGACGATAAAGGAACCGCCCCTGAAAACATCAAAAGTTTAGGTCAGTATT GCATTATTCTTTCTCGTCATTCTTTTGTCCTTTGCATATTACAATCGCTG ACCTAATggactattccagaaaaaaccgtataccccacAGGCGTGTGGAT TCATTTCAAATGATTCATTCAATAGCTTTAAAGAGGGCTTGAATTAATGA AATAAAACCCTTATTAAGATACACACAGCAGGGCCACACTATCGAGATAA TCAGAACTTGATTGAAAGTTTACTAAAATGGGGTAGTTTACAAGAGCTTA TAtagaattttttgaaagattaatCAATCTTTTCTTGTTCAAAGCTCTCG GATTAAGATCAAAGACTGATCATTTTTTGCCGTTAAAAAAACTTATAATC TTAAAACGTAGACGTCAATCAACACgcatttttaataagaacatcccaaa attttgaagccttcgaatatTCTTAGctttattttgagttttgagcctaa aaatattcttaacatgttcttattttcaacatctcgtgagtatttttgtg caatcttctaagaaattgaatgtttgaGAGTCTCCAAACCCTAAAAAGTT CTTAAGGCTGTTCTTAATactttgaccatcgaagccgaTTGTCAGCTTCT CTTCTCTCTctataaaaaagcgtgcataTTTCAGCTCTCGGACTGTTAAA AAAGCTTAAGCTTGTTAAAGATGACAATCAATAAGACGAATTTTTTATAC ATACCAAGTCagccaaaagaaaaatttcaaaattatatgTCAACAANAAA AAGCTTAAGCTTGTTGAAGATGTCAATCAATAAGACGAATTTTTTATACA TACCAAGTCagccaaaagaaaaatttcaaaattatatgTCAACAAATGTC AAATGCCTGTTCGTTAATCCTAGCTTAGAAAACTCATTCGAATACATGGT CAAATGGGCTTCTTTCAGAAATAAGGATATCGAAAAAAAGTCTATAAAAA TTGCAATTGGGCTGAACTTGCAACGTACAGGGGTAAATTTAAGTGTCTTA TTTAACGAACTTTAAACCAATTAGNATGAACTTGCAACCTACAGGGGTAA ATTTAAGTGTCTTATTTAACGAACTTTACATGACTTTCAACCAATTAGCT AGTTATAAAAATGATGCAATGTATAAGGGCACTGTAGTGATGCATACGTT TTTCTATGAGaataaatttcataagaacataaggcttccatgACCAAGAT AttaagaacaagataagaacattttaaagctttgcggGCTCTATTCTGAA ACATTCAcctcttaggaaaatggacaaaaatattcataaaattgtgaaaa aaaaacatattacgaaaatctttaggcctaaaattgaaaaagaagccttc aaaatatttaaatgttcttataaaagaaaacgtgtacatTTCGAAAGTTT ATTTTCAATAGAGCCCCCCTGCATACACAGTAGAAACAAACTTACAGTTA CAggtttttcaaacctcaatcaTTTTcgagctggcacacaacgttgtttt aacgttcaaataacgttatttggacgttatgaatgtcaaatggacgttgt tttgacgttgtgtgccggctgggttttcgatagaatttgaattaagcAGC AGTTTTGTGCTTATTAAAAAGATAATTTggggagtggaatattatcaaaa aagtttaattcaaaaactttaactCCACGTTTAActtttcgatacgctcc attattctaTAGTAATAAAAAGTCACTGCAAACAAGAAACTTTCATATAC GACGCTCTAATTTTCGATACGTTCccttatttgataaaaatccattTCCC CTTGAgaatcgaattaaagagcgtcttttttgataaaccaattcttaaaa tactttaatttgaatctttcttttACTTCGAATTGCCCAGCTGctacata acgttgtttcaacattaatgtaacgttatatggacattgTAAACgtcaga taaacgttgaaacaacgttgtgtgcaatCAGCTGGGCTGTATATCAAAGG GGGCCTTCAGGTCGCCTTCTTATTTGCCAACATTATTTAACGTTGATTCC GTGAAATTCAATTTACTTATGGTTTTCATTTGATCTTATACGCATGCGCA CAACCAACAGAGGGATACAAGAAAGTGGACATCATGCGAGGAGGACAAGA AGAAGAGTTGGGTGAAAAGGTTTTCCATTACTACATGTCCGATGCAGGTG GTGACCCAGTGTCCGCTAAACTGTTCGGAGCTTGTCGAAACCCTTTGAAG AGTATTGGGCATTGTAGTATGAAGGtataaaaatctcatttttcgtGGGA ATTATTGGGCTATTCTGGAAAAgatttgtaccccctatgttgaggagatt tttttttaaaaggatGACAACCtggatcttttttaaatttttcaggaccc ccttggattttCTTCTACTATTTccttggaccaccctggattttcgacct cgttaaactgaccaccctggatctTCAACCCTTTTTTACTGACTAACCtg gattttatcattcaaaaaaccagaccacccctggattttttattttcaat accaccctggacgtcacaactccacaacatagggggtacagactatttct ggaatagcccatttaaAGTGGAACTTAAATCATGATTTTTAAGTACCAGG GGCGATAATAAATACTAAGAAATATGCTATTCAGCTAAACTATTCGGAGC TTTTCGAAATCCATTGAAAGTATTGgacaatatttttttgataaacatta tTGGAGAGGAGAAGgtcctaccaggtctgtgaaaagtttttttgcttttt ggctgaaaaattaaaatttaagcTAACTAAGTCCCCGTGGCTGTATACAT GATTTCCCTCGCCTGTATACAcaaaaaaagattcgaattacagaaatttg aaatgaaaaacttATTTCTTGGAATACTCTTAACTATATTGttctacagt tgactctctctaatttgacTTCCAAAggacaaaaaattttcatcgaatta gagagattcaaaaagttcgaattagagagtttaTTGTTATTAAAAAACTA GCTATTAAAAccgtaaattttgaattttaaaccctttaaaaaactttcat tGTATCGCAAGTTCACCGTACTATACAAAACGTATTATAAACGGCTCAAG gagctattccaaaaaaaatcagctGACCCCCGGACATTCAGAATCACCCT CAAACAGAGAAAATTAACCCATCAGAAGCATTTGTATTTATCAACAGCTC TAAAAGTGACTGGATTGATACGTAGAATCAACTGTTTCCATACATTAGAA CCTTTCTTATTGTTCAAAACATCAATATgtgattttgtagatttttcacc cCCCAGGACAATATATCCTCAATGCACCATGACCCATGTACGAAGATTTT CTGGAAAATGCCAAATATCTGGACAAATTATTAAAAGACACATTAtataa attacttttttatcatAGATCATCGTAAAGAATTACGAACCTCTCGTCGT TGGTATTATCGTTGAAGATGATTGGGTGGAAATCAAACAAAGCTATTTGG ATAGTTTGAACGTACAAGGAGAACCACCAAAAGAACCTGAAGTCGTTGAC ATGAACGAAGGTAGAAATATAtgttttataatatattttgagagtttgtg tATTGTCTAAGTGTGTCATTGTCTCAGTGTGTTAGAAAACAAAGCTATTT GGAAAGTTTGAACGTACAAGGAGAACCACCAAAAGAACCTGAAGTCGTTG ACATGAACGAAGGTAGAAATATAtgttttataatatattttgagagtttg tgtATTGTCTAAGTGTGTCATTGTCTCAGTGTGTTAGAAAACAAAGCTAT TTGGAAAGTTTGAACGTACAAGGAGAACCACCAAAAGAACCTGAAGTCGT TGACATGAACGAAGGTAGAAATATAtgttttataatatattttgagagtt tgtgtATTGTCTAAGTGTGTCATTGTCTCAGTGTGTTAGAAAACAAAGCT ATTTGGAAAGTTTGAACGTACAAGGAGAACCACCAAAAGAACCTGAAGTC GTTGACATGAACGAAGGTAGAAATATAtgttttataatatattttgagag tttgtgtATTGTCTAAGTGTGTCATTGTCTCAGTGTGTTAGAAAACAAAG CTATTTGGAAAGTTTGAACGTACAAGGAGAACCACCAAAAGAACCTGAAG TCGTTGACATGAACGAAGGTAGAAATATAtgttttataatatattttgag agtttgtgtATTGTCTAAGTGTGTCATTGTCTCAGTGTGTTAGAAAACAA AGCTATTTGGAAAGTTTGAACGTACAAGGAGAACCACCAAAAGAACCTGA AGTCGTTGACATGAACGAAGGTAGAAATATAtgttttataatatattttg agagtttgtgtATTGTCTAAGTGTGTCATTGTCTCAGTGTGTTAGAAAAC AAAGCTATTTGGAAAGTTTGAACGTACAAGGAGAACCACCAAAAGAACCT GAAGTCGTTGACATGAACGAAGGTAGAAATATAtgttttataatatattt tgagagtttgtgtATTGTCTAAGTGTGTCATTGTCTCAGTGTGTTAGAAA ACAAAGCTATTTGGAAAGTTTGAACGTACAAGGAGAACCACCAAAAGAAC CTGAAGTCGTTGACATGAACGAAGGTAGAAATATAtgttttataatatat tttgagagtttgtgtATTGTCTAAGTGTGTCATTGTCTCAGTGTGTTAGA AAACAAAGCTATTTGGAAAGTTTGAACGTACAAGGAGAACCACCAAAAGA ACCTGAAGTCGTTGACATGAACGAAGGTAGAAATATAtgttttataatat attttgagagtttgtgtATTGTCTAAGTGTGTCATTGTCTCAGTGTGTTA GAAAACAAAGCTATTTGGAAAGTTTGAACGTACAAGGAGAACCACCAAAA GAACCTGAAGTCGTTGACATGAACGAAGGTAGAAATATAtgttttataat atattttgagagtttgtgtATTGTCTAAGTGTGTCATTGTCTCAGTGTGT TAGAAAACAAAGCTATTTGGAAAGTTTGAACGTACAAGGAGAACCACCAA AAGAACCTGAAGTCGTTGACATGAACGAAGGTAGAAATATAtgttttata atatattttgagagtttgtgtATTGTCTAAGTGTGTCATTGTCTCAGTGT GTTAGAAAACAAAGCTATTTGGAAAGTTTGAACGTACAAGGAGAACCACC AAAAGAACCTGAAGTCGTTGACATGAACGAAGGTAGAAATATAtgtttta taatatattttgagagtttgtgtATTGTCTAAGTGTGTCATTGTCTCAGT GTGTTAGAAAACAAAGCTATTTGGAAAGTTTGAACGTANACTAGcgtgta aaagaatatgatatcTTTGCATCATAATCACTATTTCTTCCTTAGTAATC GGACTCGTTGCAGACTTGGATCACGATATATGGTGCAACAAAGGTGACCC ACCAAGAAACAAAACCAAAATAGGTAATTCTTTTTGTTGTTCAACTTTCC ATTGTTTTGCATAGCATTCCCGTATTAAgatcccactgaattttccgGAA TATCTTTCCGTAATGTTTCCCAGGATAGCtggcatgagattggaaagagt tatttttctaaaaaggacAACTAAGGACCACTCtaaagtctcatgttaaa actctacattCCGGAAGTAACTTAGAGtgctcaaaaatatttttttgtgt ctaaaatttgtgctttttcttataataacaaatttataagaacacaaggc tgaaaatcggccaaaacctaagaagaAATTTAGAACAATCCTGAGCCACA AATTTAAGAAATTACtaagaaagtactgattttaaaaggttttaaacgta tttaagtttttaaataaagaaactaagcgtattaaGAGCACCGTGAGAAC ATTTAAgcatgaaaatttctaaaaaattaaaaacagcccagtctgagcca aaatttacatACATGATGTAAAAGAATTGTGCATTATTGCTGTAATAGTG AATTTGTTAActtgtcataaaaaatatataattttattttccaatttatt tAATGTCGGTCTTACATAGTAATAATCAAACACTAATTTATACCCACCAA AATAtatgattttattttggttgtaGGTTACGTTTTTGTAAGCGTTGTAC GTCCCACCGACAAAGGAAACAATACGTTTGATTATCAGCTGAGCGACGAT CAAAATGGCCGATCACTAAGTGCGACGTTGTCTGGATGCCGAAGAAATCC GTTACGCGATGTCGTGAATTGTtttatgaagattgaaaataacCAAGTGA AAGGAATTATTGTTGAAGACGATTGGGTGGAAGTTAAATAAACGCCCTCA ATTCTACGCTCTCGTAATTCCCGCCCGATATattatttcttgattttctt aatATAAAACAATTTCTAGTGAACTATACACAACGCCATCGAACATGTTT TAGTTCAACAATCTAGAAATTGTTTTTTAGACCGCGTTTTATTCATAAAC GAAAAGTAGAAAGATTACTGTTGGAAACATTTCCGCTTAGAATCCCGAGC AAACAGTCTTGTGTGAACTTCTTAGTTagcttttttttgttgaaattggg TCAACTTTGGGGTATAGGGAACATGGGGAAAAGGAATTTAATATTGTATA AATTATGTAtatcaacatttttttattttcttcaattttaatgCCTCTTT TATCAATCGTTTTAATTAATTCGAATTCTAAATCCGAAGCGTAGcttcaa tcttttttgaaaCACTTCACAAACAATAAAAGTGTTCAATCTCAGTAGAA TCTCTTAGATCTAATAACACGTTAATTGTTTGAATAACGGGTTGATGGAG AGAGGTAATTCTTAAATGATAGTGTTTTTCTTGTGAAGATTATAAAATGT GATCTTCAGATAAGGCAATTCGTTGCTTTTCATCATTTATGCCGGACATT GAATGTGGTGTGATGATGGTACTCATATGTTCAGTACCTGGGAGAATACA AGGTTCTCCTGTACTGTGCAagtatcatcatcgatacagcaCTGCTCTGA TGTGACGCgagcacagagtacaatgtctggtagcactgtgatttccctat ctaggGGTAGAAAACTATTCCGAGATAGGGCCCGGTccgatgatatcgga gggtccgcttctctctcttctctctatttttctctttgtcaaatcttgtt tatttttctaattcTTCTTTCTAATTTGTGTAAACAATCAATCTATATTA TTTAGtatcttaaatatttttttgaatataCCAAAAGAATACTTATATTG TAATAaaggaaatgtttattttatattGCAATTTCAATATACATTATCTT ATAAAAT

Coding sequence (CDS) from alignment at sc0001381:34037..41693+

>TCONS_00035862 ID=TCONS_00035862|Name=TCONS_00035862|organism=Clytia hemisphaerica|type=CDS|length=3375bp|location=Sequence derived from alignment at sc0001381:34037..41693+ (Clytia hemisphaerica)
ATGGATTTGTTTAGCGATTTCAACGATCAGAAATGGGACGATAAAGGAAC
CGCCCCTGAAAACATCAAAAGTTTAGAGGGATACAAGAAAGTGGACATCA
TGCGAGGAGGACAAGAAGAAGAGTTGGGTGAAAAGGTTTTCCATTACTAC
ATGTCCGATGCAGGTGGTGACCCAGTGTCCGCTAAACTGTTCGGAGCTTG
TCGAAACCCTTTGAAGAGTATTGGGCATTGTAGTATGAAGATCATCGTAA
AGAATTACGAACCTCTCGTCGTTGGTATTATCGTTGAAGATGATTGGGTG
GAAATCAAACAAAGCTATTTGGATAGTTTGAACGTACAAGGAGAACCACC
AAAAGAACCTGAAGTCGTTGACATGAACGAAGTAATCGGACTCGTTGCAG
ACTTGGATCACGATATATGGTGCAACAAAGGTGACCCACCAAGAAACAAA
ACCAAAATAGGTTACGTTTTTGTAAGCGTTGTACGTCCCACCGACAAAGG
AAACAATACGTTTGATTATCAGCTGAGCGACGATCAAAATGGCCGATCAC
TAAGTGCGACGTTGTCTGGATGCCGAAGAAATCCGTTACGCGATGTCGTG
AATTGTtttatgaagattgaaaataacCAAGTGAAAGGAATTATTGTTGA
AGACGATTGGGTGGAAGTTAAATAAATGGATTTGTTTAGCGATTTCAACG
ATCAGAAATGGGACGATAAAGGAACCGCCCCTGAAAACATCAAAAGTTTA
GAGGGATACAAGAAAGTGGACATCATGCGAGGAGGACAAGAAGAAGAGTT
GGGTGAAAAGGTTTTCCATTACTACATGTCCGATGCAGGTGGTGACCCAG
TGTCCGCTAAACTGTTCGGAGCTTGTCGAAACCCTTTGAAGAGTATTGGG
CATTGTAGTATGAAGATCATCGTAAAGAATTACGAACCTCTCGTCGTTGG
TATTATCGTTGAAGATGATTGGGTGGAAATCAAACAAAGCTATTTGGATA
GTTTGAACGTACAAGGAGAACCACCAAAAGAACCTGAAGTCGTTGACATG
AACGAAGTAATCGGACTCGTTGCAGACTTGGATCACGATATATGGTGCAA
CAAAGGTGACCCACCAAGAAACAAAACCAAAATAGGTTACGTTTTTGTAA
GCGTTGTACGTCCCACCGACAAAGGAAACAATACGTTTGATTATCAGCTG
AGCGACGATCAAAATGGCCGATCACTAAGTGCGACGTTGTCTGGATGCCG
AAGAAATCCGTTACGCGATGTCGTGAATTGTtttatgaagattgaaaata
acCAAGTGAAAGGAATTATTGTTGAAGACGATTGGGTGGAAGTTAAATAA
ATGGATTTGTTTAGCGATTTCAACGATCAGAAATGGGACGATAAAGGAAC
CGCCCCTGAAAACATCAAAAGTTTAGAGGGATACAAGAAAGTGGACATCA
TGCGAGGAGGACAAGAAGAAGAGTTGGGTGAAAAGGTTTTCCATTACTAC
ATGTCCGATGCAGGTGGTGACCCAGTGTCCGCTAAACTGTTCGGAGCTTG
TCGAAACCCTTTGAAGAGTATTGGGCATTGTAGTATGAAGATCATCGTAA
AGAATTACGAACCTCTCGTCGTTGGTATTATCGTTGAAGATGATTGGGTG
GAAATCAAACAAAGCTATTTGGATAGTTTGAACGTACAAGGAGAACCACC
AAAAGAACCTGAAGTCGTTGACATGAACGAAGTAATCGGACTCGTTGCAG
ACTTGGATCACGATATATGGTGCAACAAAGGTGACCCACCAAGAAACAAA
ACCAAAATAGGTTACGTTTTTGTAAGCGTTGTACGTCCCACCGACAAAGG
AAACAATACGTTTGATTATCAGCTGAGCGACGATCAAAATGGCCGATCAC
TAAGTGCGACGTTGTCTGGATGCCGAAGAAATCCGTTACGCGATGTCGTG
AATTGTtttatgaagattgaaaataacCAAGTGAAAGGAATTATTGTTGA
AGACGATTGGGTGGAAGTTAAATAAATGGATTTGTTTAGCGATTTCAACG
ATCAGAAATGGGACGATAAAGGAACCGCCCCTGAAAACATCAAAAGTTTA
GAGGGATACAAGAAAGTGGACATCATGCGAGGAGGACAAGAAGAAGAGTT
GGGTGAAAAGGTTTTCCATTACTACATGTCCGATGCAGGTGGTGACCCAG
TGTCCGCTAAACTGTTCGGAGCTTGTCGAAACCCTTTGAAGAGTATTGGG
CATTGTAGTATGAAGATCATCGTAAAGAATTACGAACCTCTCGTCGTTGG
TATTATCGTTGAAGATGATTGGGTGGAAATCAAACAAAGCTATTTGGATA
GTTTGAACGTACAAGGAGAACCACCAAAAGAACCTGAAGTCGTTGACATG
AACGAAGTAATCGGACTCGTTGCAGACTTGGATCACGATATATGGTGCAA
CAAAGGTGACCCACCAAGAAACAAAACCAAAATAGGTTACGTTTTTGTAA
GCGTTGTACGTCCCACCGACAAAGGAAACAATACGTTTGATTATCAGCTG
AGCGACGATCAAAATGGCCGATCACTAAGTGCGACGTTGTCTGGATGCCG
AAGAAATCCGTTACGCGATGTCGTGAATTGTtttatgaagattgaaaata
acCAAGTGAAAGGAATTATTGTTGAAGACGATTGGGTGGAAGTTAAATAA
ATGGATTTGTTTAGCGATTTCAACGATCAGAAATGGGACGATAAAGGAAC
CGCCCCTGAAAACATCAAAAGTTTAGAGGGATACAAGAAAGTGGACATCA
TGCGAGGAGGACAAGAAGAAGAGTTGGGTGAAAAGGTTTTCCATTACTAC
ATGTCCGATGCAGGTGGTGACCCAGTGTCCGCTAAACTGTTCGGAGCTTG
TCGAAACCCTTTGAAGAGTATTGGGCATTGTAGTATGAAGATCATCGTAA
AGAATTACGAACCTCTCGTCGTTGGTATTATCGTTGAAGATGATTGGGTG
GAAATCAAACAAAGCTATTTGGATAGTTTGAACGTACAAGGAGAACCACC
AAAAGAACCTGAAGTCGTTGACATGAACGAAGTAATCGGACTCGTTGCAG
ACTTGGATCACGATATATGGTGCAACAAAGGTGACCCACCAAGAAACAAA
ACCAAAATAGGTTACGTTTTTGTAAGCGTTGTACGTCCCACCGACAAAGG
AAACAATACGTTTGATTATCAGCTGAGCGACGATCAAAATGGCCGATCAC
TAAGTGCGACGTTGTCTGGATGCCGAAGAAATCCGTTACGCGATGTCGTG
AATTGTtttatgaagattgaaaataacCAAGTGAAAGGAATTATTGTTGA
AGACGATTGGGTGGAAGTTAAATAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_021060XLOC_021060Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00035862-exon-sc0001381-1491911889:34037..34277TCONS_00035862-exon-sc0001381-1491911889:34037..34277Clytia hemisphaericaexon
TCONS_00035862-exon-sc0001381-1510915933:34037..34277TCONS_00035862-exon-sc0001381-1510915933:34037..34277Clytia hemisphaericaexon
TCONS_00035862-exon-sc0001381-1575043694:34037..34277TCONS_00035862-exon-sc0001381-1575043694:34037..34277Clytia hemisphaericaexon
TCONS_00035862-exon-sc0001381-1491911889:36397..36560TCONS_00035862-exon-sc0001381-1491911889:36397..36560Clytia hemisphaericaexon
TCONS_00035862-exon-sc0001381-1510915933:36397..36560TCONS_00035862-exon-sc0001381-1510915933:36397..36560Clytia hemisphaericaexon
TCONS_00035862-exon-sc0001381-1575043694:36397..36560TCONS_00035862-exon-sc0001381-1575043694:36397..36560Clytia hemisphaericaexon
TCONS_00035862-exon-sc0001381-1491911889:37755..37896TCONS_00035862-exon-sc0001381-1491911889:37755..37896Clytia hemisphaericaexon
TCONS_00035862-exon-sc0001381-1510915933:37755..37896TCONS_00035862-exon-sc0001381-1510915933:37755..37896Clytia hemisphaericaexon
TCONS_00035862-exon-sc0001381-1575043694:37755..37896TCONS_00035862-exon-sc0001381-1575043694:37755..37896Clytia hemisphaericaexon
TCONS_00035862-exon-sc0001381-1491911889:39732..39809TCONS_00035862-exon-sc0001381-1491911889:39732..39809Clytia hemisphaericaexon
TCONS_00035862-exon-sc0001381-1510915933:39732..39809TCONS_00035862-exon-sc0001381-1510915933:39732..39809Clytia hemisphaericaexon
TCONS_00035862-exon-sc0001381-1575043694:39732..39809TCONS_00035862-exon-sc0001381-1575043694:39732..39809Clytia hemisphaericaexon
TCONS_00035862-exon-sc0001381-1491911889:40463..41693TCONS_00035862-exon-sc0001381-1491911889:40463..41693Clytia hemisphaericaexon
TCONS_00035862-exon-sc0001381-1510915933:40463..41693TCONS_00035862-exon-sc0001381-1510915933:40463..41693Clytia hemisphaericaexon
TCONS_00035862-exon-sc0001381-1575043694:40463..41693TCONS_00035862-exon-sc0001381-1575043694:40463..41693Clytia hemisphaericaexon
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00035862-proteinTCONS_00035862-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0001381supercontigsc0001381:34037..41693 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.303252 0.483131 0.341455 0.453367 6.62317 4.79758 3.93257 3.18901 4.61062 3.93474 4.67028 2.19495 116.672 88.8057 11.7301 12.1944 43.4019 54.5462 95.5549 102.435 80.3293 77.4392 23.0435 28.7191 27.0795 27.2251 49.0605 37.6062 0.262995 0.219232
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00035862 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
back to top