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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00035839 ID=TCONS_00035839|Name=TCONS_00035839|organism=Clytia hemisphaerica|type=transcript|length=681bp
TATGAAAAGTGTTGTGTTGAATCGATGAGTTCTAATCTACAGAGTAATTC
TATTCCCAACGTATTTGAAGCACTTGAATCATTCCACTTCTTCCAAAACG
ATCTAAAAAGatCTTCGCAAACTTATTTCATCGACGTCTGTCTAACATAC
ATCTCACTACCATCATCTACCATACCTAATATCACTCATAATGCCTTCAA
CATCTCATCACCATCTATCTAAATGGGATTATTTGAATGAGCTTCAGAAA
CTCAAAATGTAAATATTGTGTGATTTTCTCCATTTTATTCCTATTTCGGT
TGAAAGAGATATGAATGGGACCCCATTGAAAGAAGTAATCGTTTGATTCC
TCAAAATGCAACGTACAACCTGCCTTGTATTTCCATATGTATGAGTCTTC
TCGAAAAATGCCTTCAACATCTTATCACCATCTGTGTAAAAGGTATTACG
TACCTTCAAAACTTCAGAACCTCTCTATGTAATTGGTATAATGCAAATTA
CCTTCAGAACCTCGCTATGTAATTGGTATTACGCAAATTACCTTCAAAAC
CTCGCTATGTAATTGGTATAATGCAAATTAACTTCAGAACCTAGCTATGT
AATTGGTATTACGCAAATTACCTTCAGACAGAAACTTGCTTCTATTAATT
TAAATGGTATCACACAAATTACCTTTTCGGA Run BLAST on NCBI transcript from alignment at sc0001376:10961..11858- Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00035839 ID=TCONS_00035839|Name=TCONS_00035839|organism=Clytia hemisphaerica|type=transcript|length=898bp|location=Sequence derived from alignment at sc0001376:10961..11858- (Clytia hemisphaerica)
TATGAAAAGTGTTGTGTTGAATCGATGAGTTCTAATCTACAGAGTAATTC
TATTCCCAACGTATTTGAAGCACTTGAATCATTCCACTTCTTCCAAAACG
ATCTAAAAAGGTAATTGAAATTGTTTCTCTTGAATTCTAAGTTCAATATG
CCATGATGCTTAATATTATTATGTGATGTAATAAGACATTGGAATTTACC
TGAGATTTTAAGACAAGAATTTAAAATGTAAACAAATTAAGAGACTGTTG
ATTCGGTAATCGAGAGGGAATTTTATTATCATGTTTTCTTTCTTAAGATT
GATTTAATTTTTAATTTTGTATTTTAGATCTTCGCAAACTTATTTCATCG
ACGTCTGTCTAACATACATCTCACTACCATCATCTACCATACCTAATATC
ACTCATAATGCCTTCAACATCTCATCACCATCTATCTAAATGGGATTATT
TGAATGAGCTTCAGAAACTCAAAATGTAAATATTGTGTGATTTTCTCCAT
TTTATTCCTATTTCGGTTGAAAGAGATATGAATGGGACCCCATTGAAAGA
AGTAATCGTTTGATTCCTCAAAATGCAACGTACAACCTGCCTTGTATTTC
CATATGTATGAGTCTTCTCGAAAAATGCCTTCAACATCTTATCACCATCT
GTGTAAAAGGTATTACGTACCTTCAAAACTTCAGAACCTCTCTATGTAAT
TGGTATAATGCAAATTACCTTCAGAACCTCGCTATGTAATTGGTATTACG
CAAATTACCTTCAAAACCTCGCTATGTAATTGGTATAATGCAAATTAACT
TCAGAACCTAGCTATGTAATTGGTATTACGCAAATTACCTTCAGACAGAA
ACTTGCTTCTATTAATTTAAATGGTATCACACAAATTACCTTTTCGGA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00035839-exon-sc0001376-1575043694:11749..11858 | TCONS_00035839-exon-sc0001376-1575043694:11749..11858 | Clytia hemisphaerica | exon |
| TCONS_00035839-exon-sc0001376-1575043694:10961..11531 | TCONS_00035839-exon-sc0001376-1575043694:10961..11531 | Clytia hemisphaerica | exon |
| TCONS_00035839-exon-sc0001376-1510915933:11749..11858 | TCONS_00035839-exon-sc0001376-1510915933:11749..11858 | Clytia hemisphaerica | exon |
| TCONS_00035839-exon-sc0001376-1510915933:10961..11531 | TCONS_00035839-exon-sc0001376-1510915933:10961..11531 | Clytia hemisphaerica | exon |
| TCONS_00035839-exon-sc0001376-1491911889:11749..11858 | TCONS_00035839-exon-sc0001376-1491911889:11749..11858 | Clytia hemisphaerica | exon |
| TCONS_00035839-exon-sc0001376-1491911889:10961..11531 | TCONS_00035839-exon-sc0001376-1491911889:10961..11531 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0001376 | supercontig | sc0001376:10961..11858 - |
Blast
The following BLAST results are available for this feature:
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