TCONS_00035832 (transcript) - C. hemisphaerica

Overview
NameTCONS_00035832
Unique NameTCONS_00035832
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length165

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00035832 ID=TCONS_00035832|Name=TCONS_00035832|organism=Clytia hemisphaerica|type=transcript|length=165bp
AACAGACTCTCCAATGATGACCAAAGATGCCGATTTCATGATATGGGAAG
AAGACACAACAAGTCCATTATTCATCAGTATGCTTATCGAAAAAATGTAC
TCAATTTTGTGTTAGAGACGTCTAGATTGACAAAACTCAAGCTCCGTAAG
ATTTTTCCAGGATGG
Run BLAST on NCBI

transcript from alignment at sc0001371:48450..48614

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00035832 ID=TCONS_00035832|Name=TCONS_00035832|organism=Clytia hemisphaerica|type=transcript|length=165bp|location=Sequence derived from alignment at sc0001371:48450..48614 (Clytia hemisphaerica)
CCATCCTGGAAAAATCTTACGGAGCTTGAGTTTTGTCAATCTAGACGTCT
CTAACACAAAATTGAGTACATTTTTTCGATAAGCATACTGATGAATAATG
GACTTGTTGTGTCTTCTTCCCATATCATGAAATCGGCATCTTTGGTCATC
ATTGGAGAGTCTGTT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_021037XLOC_021037Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00035832-exon-sc0001371-1491911889:48450..48614TCONS_00035832-exon-sc0001371-1491911889:48450..48614Clytia hemisphaericaexon
TCONS_00035832-exon-sc0001371-1510915933:48450..48614TCONS_00035832-exon-sc0001371-1510915933:48450..48614Clytia hemisphaericaexon
TCONS_00035832-exon-sc0001371-1575043694:48450..48614TCONS_00035832-exon-sc0001371-1575043694:48450..48614Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0001371supercontigsc0001371:48450..48614 .
Expression
No biomaterial libraries express this feature.
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00035832 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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