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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00035814 ID=TCONS_00035814|Name=TCONS_00035814|organism=Clytia hemisphaerica|type=transcript|length=143bp
GTTCGGGAGATTCTTGTCTCGGAAATTTGACTTTagaactgaattttttt
aattaccaAGATGTTAACATGACTAAACGAACGAAAGGAAAGACACGTGG
TAGAGGATCACAATGTGCTGTCTGAATGTTATGttttattcAT Run BLAST on NCBI transcript from alignment at sc0001367:41291..43621+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00035814 ID=TCONS_00035814|Name=TCONS_00035814|organism=Clytia hemisphaerica|type=transcript|length=2331bp|location=Sequence derived from alignment at sc0001367:41291..43621+ (Clytia hemisphaerica)
GTTCGGGAGATTCTTGTCTCGGAAATTTGACTTTagaactgaattttttt
aattaccaAGATGTTAACATGACTAAACGAACGAAAGGAAAGACACGTGG
TAGAGGATCACAATGTGCTGTCTGAATGTTATGGTATGAATCTTTGGTAT
GTTTCGATCTAGTGGTTTTGCAGTTTTGACAAGTTTAAAAGgcaatttga
atgtttttaagCTATAGATTTTCCTCTATTTAAGAGAtcgttttttctca
aaacaagGCAATCTTCGACTTTAATTTCAGTGTTTTAATTTTCGGTCTTG
AATCGTGTTGTTTACTTGAGAAATCATGTTTTTctcaaattaagaaaaat
tgtcTCGTGAAACACTTATTTTTGAGGTTTCTTTAGGAAATTTAAATTGC
TTTGTTTGCGGCAGTTTTCGAAAGAGTATTCAATTAATTCTCTGTCAGGT
AGTAAAAACAAAATTAGCTTTTAATGAAAGAGGGTGCGAAATGATATTTA
TTTTGGTGCTCACATACATCAATTGAGTATTTTGTTAATCTAGATTTTTT
GTACCGTtagtggctgcgtttagaccaactggcatttgtaatttggcatt
tgctcatgagggattcgattttaatagcttttccattgtattttctgtca
tggcattNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNaac
aattgcgcggaacaatagaattcaaaagaatactgcaagcaattacaaat
gccaggctggtctaaacgcagccaatgTTGGTTTGAGAATGTGCACTTTA
AGGATGATACGTTTCCGTGCGTTTTGAagttaatatttttgaaaattttc
tgaaaatacaAACTTATTTGTTCCTGATTAACATTACACACAAATGAAAC
CCATATTATAGGGATTAAAGTAATTAACGATGAAAATTGTTTTGTCACTT
GGAAAACAATTatcttttgtttcaaatttattGCAACactctttgaaaga
aaaattattgctGAGCAGTGACATCCAGTAACAGTTGTATTTCATTTCTG
TTTTTatttcacattttcaaaaaaagcaaaagCTAACTGAAAAGATAGTA
TCTTGGAAATAAGAATGTCTGGTcgggttttgaaattttttgttacGTTT
TGGTTACGATTTTTCATGAATTCTTGTTTAGGTTTTCTTGAAATCAATTT
AAGGTTTGTACATATGGTGTAAACAAGCCAGCATCATTATTTGTCAAATT
GTTCGAGATTTGTAAGGGTTATTGTGCGTTTGACTTGTTGCGATAACGTT
TCATGTGTgtaatgaattttcaaattcattatTATCTACtatgttttttg
taaaaataccCAAAGTTTTTGAGGCCTTCggatatgttcttaacttttag
attttcaaccctgaaatgttctcaacatgGTTTTATTTTCATGTGGGAGT
ATTTTTGTACATGTTCCCAAGATATATTTTGGATTCCGCaaggccttaaa
atgttcttttactACTCTGTATGGTTTTTGAAAGTCGAAAACCTTTTTCG
AAATAGGGGTGcttacacaatttttttatatcttaTACCTTTTCTTATAG
ATCTTTAatcttatttttcagttttattcAT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00035814-exon-sc0001367-1491911889:41291..41423 | TCONS_00035814-exon-sc0001367-1491911889:41291..41423 | Clytia hemisphaerica | exon |
| TCONS_00035814-exon-sc0001367-1510915933:41291..41423 | TCONS_00035814-exon-sc0001367-1510915933:41291..41423 | Clytia hemisphaerica | exon |
| TCONS_00035814-exon-sc0001367-1575043694:41291..41423 | TCONS_00035814-exon-sc0001367-1575043694:41291..41423 | Clytia hemisphaerica | exon |
| TCONS_00035814-exon-sc0001367-1491911889:43612..43621 | TCONS_00035814-exon-sc0001367-1491911889:43612..43621 | Clytia hemisphaerica | exon |
| TCONS_00035814-exon-sc0001367-1510915933:43612..43621 | TCONS_00035814-exon-sc0001367-1510915933:43612..43621 | Clytia hemisphaerica | exon |
| TCONS_00035814-exon-sc0001367-1575043694:43612..43621 | TCONS_00035814-exon-sc0001367-1575043694:43612..43621 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0001367 | supercontig | sc0001367:41291..43621 + |
Blast
The following BLAST results are available for this feature:
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