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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00035789 ID=TCONS_00035789|Name=TCONS_00035789|organism=Clytia hemisphaerica|type=transcript|length=1536bp
ATTTTATTGATACTTACGTGTCAGCGATGGTGTTTCTGCTTGTGGTTTTT
TCGAAAGTTAGCTTGTGGTTGTTAGTAAATTAAATTTGCAaataggtttt
gtttttgattttttttttagtttatgACAGGTGTGTGTGCGTGTAACATG
ATtctttttttggtgtttttattggtTTGTGATGATGTGATGTGGGGTTT
CGTACAGGTCAAAATTTGGAAAGTAATAGTAAGGATGACGGTTGATGATG
TTATTTGGGTTAGTTTGGGCTGACGTAAACCATTTTTTTGATAGTGCGTG
TTTCCTGTCATAAACTTTTGTTACCTTTGCTTGTGTTCTGAGATCGTTGG
TGTGTTCGAAGTTGTCTTTTTTTAGTAAAGTTCTCAAGCAGTTGTTTTGG
CACACTTCGATTTTGTTCTTGTTTCTTAAAGACAAATTTAGTAATGCTGG
GCTTCCATACTCTAGGAGGCTTCTGCCCATAGATAGATATATTTTGCGTT
TTGTCGAGACGGTGATGTTTTTTTTGAGTTTATTTAATTTATGTAGAATG
TGGCGGCTTCCTTGAGCTTTATTGATGGAATTTTCTATGTGTGAATTAAA
CGTTAATTGAGTGTCGAAAGTGAGTCCTAGAAAGTACATTTCTTTAACTT
GTTCTAtgttttggttttttattttgtattttctgtTGTAGTTTACTGGA
CTTTTCGTGAATGACATTGATTtggttttttttatattgatttttagTTT
CCATTTATCACACCATTTAATGATTTCTGTTAGATGTTTTTGTAATCTTA
TGTTGTGGTTGTAATTGTTGTTTGATGTGCGTGCGTATAGTGCTAGATCG
TCAGCAAATTGTGAGAGTNTTATTGTAATTTCTGGGATTAATTTGTTGAC
TGTGTTAATGTGTTTTTCTAGTTTGTTGATGGTGTGGTCTATTTCATTTT
TCGTTGATGGCGTGTTCTGGAATTTTTGGGAAAAGAGATTGTTTAGATTA
CCCCAGTTTACTTTGTggtattgttttattttgttgttaattttgaattt
ttgaagcttttcttTGATTGTGGTTTTAAAGGTGACTGGGGTGTGGTCAC
TGCCCACTTCTTTTTCGTTTTGTGTTTTAATGTCAGAAATTATGTTTTTT
GGGTCCCAAAGGGCAATGTGTATGGTGCTTTCTGCACCTGTTGCAGGATT
TTTATATGTGTATTCAGTGTGTTCAGAGTGTGTTAGGTCGATGTTTTGTA
ATGTTTCATTTAGACTATTGCCCCCTGGGTTATTCTGGGGATTATTCCAA
TTTTTATGTTTGCAGTTTAAGTCCCCTATGATCATCGAGTTTTTGTTTAA
GAGTAAATTGGCGACGTTGTTTGTGTCGATCAGGTTTGTTTTTGGGTTGT
AGTAGTTTATTATTTCGAAATGAGATTTTTcggtttttatttttgttgaa
aggTATTCATTTTGGTTAACTACTTTTTCGTATTCGTCGATGATGTTTAG
GGTTTTTTTTGTCAGGGTCATTAACCCTCCACCTGG Run BLAST on NCBI protein sequence of TCONS_00035789-protein >TCONS_00035789-protein ID=TCONS_00035789-protein|Name=TCONS_00035789-protein|organism=Clytia hemisphaerica|type=polypeptide|length=455bp
PGGGLMTLTKKTLNIIDEYEKVVNQNEYLSTKIKTEKSHFEIINYYNPKT
NLIDTNNVANLLLNKNSMIIGDLNCKHKNWNNPQNNPGGNSLNETLQNID
LTHSEHTEYTYKNPATGAESTIHIALWDPKNIISDIKTQNEKEVGSDHTP
VTFKTTIKEKLQKFKINNKIKQYHKVNWGNLNNLFSQKFQNTPSTKNEID
HTINKLEKHINTVNKLIPEITIXLSQFADDLALYARTSNNNYNHNIRLQK
HLTEIIKWCDKWKLKINIKKTKSMSFTKSPVNYNRKYKIKNQNIEQVKEM
YFLGLTFDTQLTFNSHIENSINKAQGSRHILHKLNKLKKNITVSTKRKIY
LSMGRSLLEYGSPALLNLSLRNKNKIEVCQNNCLRTLLKKDNFEHTNDLR
TQAKVTKVYDRKHALSKKWFTSAQTNPNNIINRHPYYYFPNFDLYETPHH
IITNQ Run BLAST on NCBI transcript from alignment at sc0001362:18983..20518 Legend: exonCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00035789 ID=TCONS_00035789|Name=TCONS_00035789|organism=Clytia hemisphaerica|type=transcript|length=1536bp|location=Sequence derived from alignment at sc0001362:18983..20518 (Clytia hemisphaerica)
CCAGGTGGAGGGTTAATGACCCTGACAAAAAAAACCCTAAACATCATCGA
CGAATACGAAAAAGTAGTTAACCAAAATGAATAcctttcaacaaaaataa
aaaccgAAAAATCTCATTTCGAAATAATAAACTACTACAACCCAAAAACA
AACCTGATCGACACAAACAACGTCGCCAATTTACTCTTAAACAAAAACTC
GATGATCATAGGGGACTTAAACTGCAAACATAAAAATTGGAATAATCCCC
AGAATAACCCAGGGGGCAATAGTCTAAATGAAACATTACAAAACATCGAC
CTAACACACTCTGAACACACTGAATACACATATAAAAATCCTGCAACAGG
TGCAGAAAGCACCATACACATTGCCCTTTGGGACCCAAAAAACATAATTT
CTGACATTAAAACACAAAACGAAAAAGAAGTGGGCAGTGACCACACCCCA
GTCACCTTTAAAACCACAATCAaagaaaagcttcaaaaattcaaaattaa
caacaaaataaaacaataccACAAAGTAAACTGGGGTAATCTAAACAATC
TCTTTTCCCAAAAATTCCAGAACACGCCATCAACGAAAAATGAAATAGAC
CACACCATCAACAAACTAGAAAAACACATTAACACAGTCAACAAATTAAT
CCCAGAAATTACAATAANACTCTCACAATTTGCTGACGATCTAGCACTAT
ACGCACGCACATCAAACAACAATTACAACCACAACATAAGATTACAAAAA
CATCTAACAGAAATCATTAAATGGTGTGATAAATGGAAActaaaaatcaa
tataaaaaaaaccaAATCAATGTCATTCACGAAAAGTCCAGTAAACTACA
acagaaaatacaaaataaaaaaccaaaacaTAGAACAAGTTAAAGAAATG
TACTTTCTAGGACTCACTTTCGACACTCAATTAACGTTTAATTCACACAT
AGAAAATTCCATCAATAAAGCTCAAGGAAGCCGCCACATTCTACATAAAT
TAAATAAACTCAAAAAAAACATCACCGTCTCGACAAAACGCAAAATATAT
CTATCTATGGGCAGAAGCCTCCTAGAGTATGGAAGCCCAGCATTACTAAA
TTTGTCTTTAAGAAACAAGAACAAAATCGAAGTGTGCCAAAACAACTGCT
TGAGAACTTTACTAAAAAAAGACAACTTCGAACACACCAACGATCTCAGA
ACACAAGCAAAGGTAACAAAAGTTTATGACAGGAAACACGCACTATCAAA
AAAATGGTTTACGTCAGCCCAAACTAACCCAAATAACATCATCAACCGTC
ATCCTTACTATTACTTTCCAAATTTTGACCTGTACGAAACCCCACATCAC
ATCATCACAAaccaataaaaacaccaaaaaaagaATCATGTTACACGCAC
ACACACCTGTcataaactaaaaaaaaaatcaaaaacaaaacctattTGCA
AATTTAATTTACTAACAACCACAAGCTAACTTTCGAAAAAACCACAAGCA
GAAACACCATCGCTGACACGTAAGTATCAATAAAAT Coding sequence (CDS) from alignment at sc0001362:18983..20518 >TCONS_00035789 ID=TCONS_00035789|Name=TCONS_00035789|organism=Clytia hemisphaerica|type=CDS|length=1368bp|location=Sequence derived from alignment at sc0001362:18983..20518 (Clytia hemisphaerica)
CCAGGTGGAGGGTTAATGACCCTGACAAAAAAAACCCTAAACATCATCGA
CGAATACGAAAAAGTAGTTAACCAAAATGAATAcctttcaacaaaaataa
aaaccgAAAAATCTCATTTCGAAATAATAAACTACTACAACCCAAAAACA
AACCTGATCGACACAAACAACGTCGCCAATTTACTCTTAAACAAAAACTC
GATGATCATAGGGGACTTAAACTGCAAACATAAAAATTGGAATAATCCCC
AGAATAACCCAGGGGGCAATAGTCTAAATGAAACATTACAAAACATCGAC
CTAACACACTCTGAACACACTGAATACACATATAAAAATCCTGCAACAGG
TGCAGAAAGCACCATACACATTGCCCTTTGGGACCCAAAAAACATAATTT
CTGACATTAAAACACAAAACGAAAAAGAAGTGGGCAGTGACCACACCCCA
GTCACCTTTAAAACCACAATCAaagaaaagcttcaaaaattcaaaattaa
caacaaaataaaacaataccACAAAGTAAACTGGGGTAATCTAAACAATC
TCTTTTCCCAAAAATTCCAGAACACGCCATCAACGAAAAATGAAATAGAC
CACACCATCAACAAACTAGAAAAACACATTAACACAGTCAACAAATTAAT
CCCAGAAATTACAATAANACTCTCACAATTTGCTGACGATCTAGCACTAT
ACGCACGCACATCAAACAACAATTACAACCACAACATAAGATTACAAAAA
CATCTAACAGAAATCATTAAATGGTGTGATAAATGGAAActaaaaatcaa
tataaaaaaaaccaAATCAATGTCATTCACGAAAAGTCCAGTAAACTACA
acagaaaatacaaaataaaaaaccaaaacaTAGAACAAGTTAAAGAAATG
TACTTTCTAGGACTCACTTTCGACACTCAATTAACGTTTAATTCACACAT
AGAAAATTCCATCAATAAAGCTCAAGGAAGCCGCCACATTCTACATAAAT
TAAATAAACTCAAAAAAAACATCACCGTCTCGACAAAACGCAAAATATAT
CTATCTATGGGCAGAAGCCTCCTAGAGTATGGAAGCCCAGCATTACTAAA
TTTGTCTTTAAGAAACAAGAACAAAATCGAAGTGTGCCAAAACAACTGCT
TGAGAACTTTACTAAAAAAAGACAACTTCGAACACACCAACGATCTCAGA
ACACAAGCAAAGGTAACAAAAGTTTATGACAGGAAACACGCACTATCAAA
AAAATGGTTTACGTCAGCCCAAACTAACCCAAATAACATCATCAACCGTC
ATCCTTACTATTACTTTCCAAATTTTGACCTGTACGAAACCCCACATCAC
ATCATCACAAaccaataa
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00035789-exon-sc0001362-1491911889:18983..20518 | TCONS_00035789-exon-sc0001362-1491911889:18983..20518 | Clytia hemisphaerica | exon |
| TCONS_00035789-exon-sc0001362-1510915933:18983..20518 | TCONS_00035789-exon-sc0001362-1510915933:18983..20518 | Clytia hemisphaerica | exon |
| TCONS_00035789-exon-sc0001362-1575043694:18983..20518 | TCONS_00035789-exon-sc0001362-1575043694:18983..20518 | Clytia hemisphaerica | exon |
The following polypeptide feature(s) derives from this transcript:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0001362 | supercontig | sc0001362:18983..20518 . |
Annotated Terms
The following terms have been associated with this transcript:
Blast
The following BLAST results are available for this feature:
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