TCONS_00035737 (transcript) - C. hemisphaerica

Overview
NameTCONS_00035737
Unique NameTCONS_00035737
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length533

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00035737 ID=TCONS_00035737|Name=TCONS_00035737|organism=Clytia hemisphaerica|type=transcript|length=533bp
ttttagcgatgaacggataataaaccatttatttggacgcagtctcatcc
aatatgaaaaatattgggctacgAGAAAATATATTGGACTCGGCGAAgcc
tcgtccaatatctttttacgcacgcccaatatttttgcatattggattcg
actttgtccaataactgcttattATTTATTTGTCGATGAATATCTTCTTT
ATTTCACTTGCTAGGCGTACGTTGACAGGTGGCGAGTCAATGCTAACAGA
GCTGCCCAAGCACAAAGTAAATTGAAAATTCTAGAAAAATTGCCAGACTT
GAAACCAGTAGAAATCGAACCAGAAGTTGTTTTACGTTTACCAGAAACTG
ATCGAGTCAACGCAACTATGCTACGGTTGGATGAGGTAAAATCGTTTTTA
ATAGATAAAATTTATGTCCGTGTACTTGTCATAACTCGTCTAATTTTCGT
TTCTGCAATGtttacatattttgaagtatttACAATGACCAGCGCAATTT
CAGtgaatcaaataaaaatatccttCCTAGCAG
Run BLAST on NCBI

transcript from alignment at sc0001355:66063..66756+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00035737 ID=TCONS_00035737|Name=TCONS_00035737|organism=Clytia hemisphaerica|type=transcript|length=694bp|location=Sequence derived from alignment at sc0001355:66063..66756+ (Clytia hemisphaerica)
ttttagcgatgaacggataataaaccatttatttggacgcagtctcatcc
aatatgaaaaatattgggctacgAGAAAATATATTGGACTCGGCGAAgcc
tcgtccaatatctttttacgcacgcccaatatttttgcatattggattcg
actttgtccaataactgcttattATTTATTTGTCGATGAATATCTTCTTT
ATTTCACTTGCTAGGCGTACGTTGACAGGTGGCGAGTCAATGCTAACAGA
GCTGCCCAAGCACAAAGTAAATTGAAAATTCTAGAAAAATTGTAAGTTGA
AAATTACTTTAATATTTACATTCCAATCATgtctttaattttgtttttgc
cGTGTGTAACGTTCGTATTCCGTCTTTATTGTGTCAACAAACTATTTggt
tctttttctttatttgttgAATTTATCTATCTTTTACACGTCAATTTTAC
AGGCCAGACTTGAAACCAGTAGAAATCGAACCAGAAGTTGTTTTACGTTT
ACCAGAAACTGATCGAGTCAACGCAACTATGCTACGGTTGGATGAGGTAA
AATCGTTTTTAATAGATAAAATTTATGTCCGTGTACTTGTCATAACTCGT
CTAATTTTCGTTTCTGCAATGtttacatattttgaagtatttACAATGAC
CAGCGCAATTTCAGtgaatcaaataaaaatatccttCCTAGCAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_020955XLOC_020955Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00035737-exon-sc0001355-1491911889:66063..66353TCONS_00035737-exon-sc0001355-1491911889:66063..66353Clytia hemisphaericaexon
TCONS_00035737-exon-sc0001355-1510915933:66063..66353TCONS_00035737-exon-sc0001355-1510915933:66063..66353Clytia hemisphaericaexon
TCONS_00035737-exon-sc0001355-1575043694:66063..66353TCONS_00035737-exon-sc0001355-1575043694:66063..66353Clytia hemisphaericaexon
TCONS_00035737-exon-sc0001355-1491911889:66515..66756TCONS_00035737-exon-sc0001355-1491911889:66515..66756Clytia hemisphaericaexon
TCONS_00035737-exon-sc0001355-1510915933:66515..66756TCONS_00035737-exon-sc0001355-1510915933:66515..66756Clytia hemisphaericaexon
TCONS_00035737-exon-sc0001355-1575043694:66515..66756TCONS_00035737-exon-sc0001355-1575043694:66515..66756Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0001355supercontigsc0001355:66063..66756 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
46.1701	51.7241	33.3608	34.1309	48.9602	40.8697	58.5112	64.4411	67.9651	58.5984	105.989	102.821	115.296	123.871	73.2894	78.5304	48.898	63.1226	59.1482	57.0241	61.6504	64.1337	42.0267	43.6538	80.2118	85.6087	41.5578	52.9668	33.1082	39.8582
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00035737 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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