TCONS_00035712 (transcript) - C. hemisphaerica

Overview
NameTCONS_00035712
Unique NameTCONS_00035712
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length119

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00035712 ID=TCONS_00035712|Name=TCONS_00035712|organism=Clytia hemisphaerica|type=transcript|length=119bp
TGGAACCCCTTCTAACTTTTTTCAACTCTATATTTCTTACTCAAATTTTG
TGTGGCAACTCCATACGACATATAATTTTGGggggtcatttttttgccac
CTGAGTATTTACAGACCGG
Run BLAST on NCBI

transcript from alignment at sc0001353:48436..48554

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00035712 ID=TCONS_00035712|Name=TCONS_00035712|organism=Clytia hemisphaerica|type=transcript|length=119bp|location=Sequence derived from alignment at sc0001353:48436..48554 (Clytia hemisphaerica)
CCGGTCTGTAAATACTCAGgtggcaaaaaaatgaccccCCAAAATTATAT
GTCGTATGGAGTTGCCACACAAAATTTGAGTAAGAAATATAGAGTTGAAA
AAAGTTAGAAGGGGTTCCA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_020936XLOC_020936Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00035712-exon-sc0001353-1491911889:48436..48554TCONS_00035712-exon-sc0001353-1491911889:48436..48554Clytia hemisphaericaexon
TCONS_00035712-exon-sc0001353-1510915933:48436..48554TCONS_00035712-exon-sc0001353-1510915933:48436..48554Clytia hemisphaericaexon
TCONS_00035712-exon-sc0001353-1575043694:48436..48554TCONS_00035712-exon-sc0001353-1575043694:48436..48554Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0001353supercontigsc0001353:48436..48554 .
Expression
No biomaterial libraries express this feature.
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00035712 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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