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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00035706 ID=TCONS_00035706|Name=TCONS_00035706|organism=Clytia hemisphaerica|type=transcript|length=972bp
ATTTCAACGAAATCGGACATGTGGTTGTCCagaaagtgagcattttaggt
gaagaaaacgCTCTTACACTTTCAGAAGTAATGAAGTTCATCACCGGTTG
TTCTTCAAAACCAGCGTCTGGGTTACCAGGGAAAATCACTGTGATATTTG
AGAAATATTGTCCCGAAAATTGCAGATGTAAACCCACAACTTCTAGCTGC
GATATTCAAATCGAAGTTGCTTTGCACTACACTACCAAACGTGACATGAT
GATAGCTTTAACAGATGCATGCCGCGAGAGTAAAGGAATGCTAAGATACT
AATCCTATAAACGGACCGTTTTTAtataaatcttttgttttacaaAACGA
CATTGCGAATCAAATCGTATAGTATTACTAAAGTGATTTTGATATAGCtt
gcttttatttttgataatgtatATAATATTATTTATTCATAAACTAGAGT
ATTTCAGATTTTCGCTAACAATATTTTGATCAGGAATCAGAAATAGGTAT
AGGAATATTTAACTTGATTGACTTGACTATATTAACTTGGTTATTTTTGT
GCAAAACTTTGGTTTGAATTATCTTAAATCCTTATCCAAAGTAAAGAGGA
CCTTCATTTGTTATTAACAATATCATGTATGGtactttttatttcttttc
gtTTATATTCATAtttgttttttcattaatttctgTTCCCTACAGTGAAA
GCCTTGCTAATACAATGCGTGTATTGGATTCAAAACCAAAAAGCTCCTTC
AGTACATCATGTTTTCGTTCTTTTCGTTTATTCTTacgtttatttttatt
attctgtgcattttttttttgttattgccTTTGGTTGTTTGGCGAAAGGT
TCCATCTTTCATTCAAAGTTTTATTAAATCGTTCCGttaaaagtatattt
tttaaatagatGATTATGATTTAAAGAGGCTTAAATTGTGACTTTTTTAT
CATTCATATTTTTAAAGTTGAC Run BLAST on NCBI transcript from alignment at sc0001353:46809..48323- Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00035706 ID=TCONS_00035706|Name=TCONS_00035706|organism=Clytia hemisphaerica|type=transcript|length=1515bp|location=Sequence derived from alignment at sc0001353:46809..48323- (Clytia hemisphaerica)
ATTTCAACGAAATCGGACATGTGGTTGTCCAGAAAGTGAGCATTTTAGGT
AAATTATTGACTGTTCTCTAAAATAGGAACCACGCAGGTGGCTGACTTGA
AATTTTTCCACATTCCTCAGATGGTCAGTCAATGCCTATCACTCGTCAAA
ATTTCGGTAGTTCATGAGTTCCAGAGGGGGGCTATGTGTATTTTGCAGAC
CTGTCTGTAAAGTATTAAATATCAATAAGACAAAATTTTGTTCGTCACCA
CTTGTTGCACTTGTTACTTTTAGTTGAAAAATTATGATTTTAGCCAATTT
GACGTTCTGGTCTGTAAAATACCAACCAAACAGGTCAACTTGAAATTTTG
CAAGTCATCCCATCCCGTTTGTCTTTTCAAGCCATCAGCATTTTATAGAT
ATTGATATTTCAGACCCACCCCTCCCCCAAAATGCTTCCTCTATTAAAAA
TATAGGAAGATGCATGAAAGGTAACCCTCTCCCTTGTCAAATCCCTAAAT
TTTCTCATCGTTTCTTCTCAGGCCCTAGTTGTGTATACTTTGCTTTCATA
TAAAAATACATCTTTTCACAATTCTTGTCATTACATTTTAGGTGAAGAAA
ACGCTCTTACACTTTCAGAAGTAATGAAGTTCATCACCGGTTGTTCTTCA
AAACCAGCGTCTGGGTTACCAGGGAAAATCACTGTGATATTTGAGAAATA
TTGTCCCGAAAATTGCAGATGTAAACCCACAACTTCTAGCTGCGATATTC
AAATCGAAGTTGCTTTGCACTACACTACCAAACGTGACATGATGATAGCT
TTAACAGATGCATGCCGCGAGAGTAAAGGAATGCTAAGATACTAATCCTA
TAAACGGACCGTTTTTATATAAATCTTTTGTTTTACAAAACGACATTGCG
AATCAAATCGTATAGTATTACTAAAGTGATTTTGATATAGCTTGCTTTTA
TTTTTGATAATGTATATAATATTATTTATTCATAAACTAGAGTATTTCAG
ATTTTCGCTAACAATATTTTGATCAGGAATCAGAAATAGGTATAGGAATA
TTTAACTTGATTGACTTGACTATATTAACTTGGTTATTTTTGTGCAAAAC
TTTGGTTTGAATTATCTTAAATCCTTATCCAAAGTAAAGAGGACCTTCAT
TTGTTATTAACAATATCATGTATGGTACTTTTTATTTCTTTTCGTTTATA
TTCATATTTGTTTTTTCATTAATTTCTGTTCCCTACAGTGAAAGCCTTGC
TAATACAATGCGTGTATTGGATTCAAAACCAAAAAGCTCCTTCAGTACAT
CATGTTTTCGTTCTTTTCGTTTATTCTTACGTTTATTTTTATTATTCTGT
GCATTTTTTTTTTGTTATTGCCTTTGGTTGTTTGGCGAAAGGTTCCATCT
TTCATTCAAAGTTTTATTAAATCGTTCCGTTAAAAGTATATTTTTTAAAT
AGATGATTATGATTTAAAGAGGCTTAAATTGTGACTTTTTTATCATTCAT
ATTTTTAAAGTTGAC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00035706-exon-sc0001353-1575043694:48276..48323 | TCONS_00035706-exon-sc0001353-1575043694:48276..48323 | Clytia hemisphaerica | exon |
| TCONS_00035706-exon-sc0001353-1575043694:46809..47732 | TCONS_00035706-exon-sc0001353-1575043694:46809..47732 | Clytia hemisphaerica | exon |
| TCONS_00035706-exon-sc0001353-1510915933:48276..48323 | TCONS_00035706-exon-sc0001353-1510915933:48276..48323 | Clytia hemisphaerica | exon |
| TCONS_00035706-exon-sc0001353-1510915933:46809..47732 | TCONS_00035706-exon-sc0001353-1510915933:46809..47732 | Clytia hemisphaerica | exon |
| TCONS_00035706-exon-sc0001353-1491911889:48276..48323 | TCONS_00035706-exon-sc0001353-1491911889:48276..48323 | Clytia hemisphaerica | exon |
| TCONS_00035706-exon-sc0001353-1491911889:46809..47732 | TCONS_00035706-exon-sc0001353-1491911889:46809..47732 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0001353 | supercontig | sc0001353:46809..48323 - |
Blast
The following BLAST results are available for this feature:
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