TCONS_00035698 (transcript) - C. hemisphaerica

Overview
NameTCONS_00035698
Unique NameTCONS_00035698
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1069

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00035698 ID=TCONS_00035698|Name=TCONS_00035698|organism=Clytia hemisphaerica|type=transcript|length=1069bp
ATACATGTCGTCTGATAATAAATCAATGATGCTGATGGATAATCAAAGGG
AATGTCGCAATTCAGAAACATTTCAATGAGGGATATAGctataaaaacat
tttacggTTGCTGCAAAGACTTGGTATTGTGATCAgCATGCGAAAGTTGA
AAAGAATCTTATTCAGCCTCGGGCTTGCAAGAAGAAAACCAAATTGTTCA
CTGGCCCATGTGTGTGATACCCTTATGACTGAAATTCAAGGAAGTGGAAG
CTTGCTAGGATATAGATGTATGCATCAGAAATTGCGTGTAATCCATAACA
TTCAAATCAGCAGAAACAATGTGATGAATCTTCAAAAGGCTATCGACCCT
ATTGGTGTTGCTGAGCGCCGTGCTAGGAAATTAAAGAGAAGAAGATACAT
CACACCTGGTCCTAACTATTTGTGGCACCTGGATGGTTACGATAAGCTGA
AACGATATGGGATATGTATACATGGTTGTATTGACGGcTATTCCAGAAAG
TTGATCTGGTTGGAAGCAGCATCTACTAACAATTGTCCAGCTGTTGTGGC
TGGCTTTTTTCTCAATCAAGTTAAATCACTCAAAGGTACTGCGTTAAACG
TTCGTGCAGACAGAGGAACAGAAAACTCGAACATCGCTGGAATACAGAGG
CTTTTTCGCTCAAACGACAATGACTTCCAAGCTATTGAAAAAAGTTTCCG
ATTTGGCAGGTCAACTTCAAATCAAAGAATTGAAGCATTTTGGTCTCAAT
TGAAGCGGTCACTGACTCAATGGTGGATGAACTTTTTTAAGGACATGATT
GACGATGGAACATTTGATGAATCTGATGAAATTCAAAGggaatgtttaaa
attttgttttctccaACTGATTCAAAAAGAGTTAGATGATTTCAAACTAA
TACACAACACTCACAGAAGAAGTAACGAAACAACTGGTGGAAAGCCGGAA
CTTTTGTACAGCATGCCAAATTATTTCGGTGCCACCGACTTTATGTGGAA
TGTTCGTGAAGCTGAAATAAATGTTGCTGAAGCGTATTGTCGTACACCGA
ACGTTTTTGGTTGTggaaa
Run BLAST on NCBI

protein sequence of TCONS_00035698-protein

>TCONS_00035698-protein ID=TCONS_00035698-protein|Name=TCONS_00035698-protein|organism=Clytia hemisphaerica|type=polypeptide|length=310bp
MRKLKRILFSLGLARRKPNCSLAHVCDTLMTEIQGSGSLLGYRCMHQKLR
VIHNIQISRNNVMNLQKAIDPIGVAERRARKLKRRRYITPGPNYLWHLDG
YDKLKRYGICIHGCIDGYSRKLIWLEAASTNNCPAVVAGFFLNQVKSLKG
TALNVRADRGTENSNIAGIQRLFRSNDNDFQAIEKSFRFGRSTSNQRIEA
FWSQLKRSLTQWWMNFFKDMIDDGTFDESDEIQRECLKFCFLQLIQKELD
DFKLIHNTHRRSNETTGGKPELLYSMPNYFGATDFMWNVREAEINVAEAY
CRTPNVFGCG
Run BLAST on NCBI

transcript from alignment at sc0001353:32824..39859+

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00035698 ID=TCONS_00035698|Name=TCONS_00035698|organism=Clytia hemisphaerica|type=transcript|length=7036bp|location=Sequence derived from alignment at sc0001353:32824..39859+ (Clytia hemisphaerica)
ATACATGTCGTCTGATAATAAATCAATGATGCTGATGGATAATCAAAGGT
AATTCAGCTCAGGTCCTGCAGGGAATCAATCCAAAATAGCTTCCTCAtaa
tattataaaaataaatagaacGAAGGAGCTGACTTTAAAAATCAAGGTAT
TTCCCTCGTCTAGACAATTTTTGGACGGAGTATATATAAATAAGAGATTA
CAGAGCTCTTAGTATATACAGGCAGTTTATAAAAGTACATcgatttttgc
ataaaaaaaacTTCTACTCGTCAGATACGGAACAAaagaaagtgataaaa
aaaacaaaagaaacaccGATGAACCCAATTTCTGGCGTATCTTTTACGAA
AAATTTGATCCGTGTTAGCAATCGAacgatatttgatattttctttttaa
cccATCGATGCGaagaacagaaaagaagaactttagtTTTTGCCCATCTG
CTATAGAGTGTGACAAAATTCCTTATATAAAATTGTGTTCTCATGCTTGG
AGATTGAAAAAGATTCAGGTCATAATGACAAGAGATAGCAAGAGATGCGG
AAGATTACGTAATTAGtaaatgtcttaaaattacaaACGCAGTCGCATAT
ATTTTTAGCATCTGTATTCTCAAGTGTATTTGGAAAAACAGTTTTACGAG
TGTAAGAGCTTGAGGAGTGTTTAATGACTTTTTCTCACTCGTTTGGTTGC
CGTAGTGAATAATAACAGTTTTGtaagcttttattttttatgctAAAATT
GATGTACTTTTATAAACTGACAGGATAAAACACTGGATAACATtgtcaaa
taaaaatgggggaGGGTAATTTGTGGTTTTTTTAGTTTCAGTGGGGCTTA
TACAGGCTTTAGCACCTCACCAGTATAATGAATGGCAGTATCTTTGTTTG
GACAACATGAAGCACACTATTTATtttagttttcagttttttttttagtt
ttttaagttGTCAGCTTTCCGTTGTAAAGTTCCCTAAAAAATAATGGAAT
TCCGATATACTTTGGCAACAAAACTGGGTGAAATTTATGGAATTCCCATA
CCTTTTACCTCCATTATACTAACAGTTGGACCTATCTCCTTTTTACAACT
GTCATTTCTTTTTCTCCTAGGGAATGTCGCAATTCAGAAACATTTCAATG
AGGGATATAGctataaaaacattttacggTTGCTGCAAAGACTTGGTATT
GTGATCAggtatataaaaataaatacattAAAGGTCAAGGTCATTGTTAT
TATAGAGTACTATAACCAGACTATAAAATTTTAAGTAATTAATTTCAATT
ACCagattaaattctaattaaggAAAAATTACatcatcaaatttgatatt
tagaTAAATTTTAATCCCTTGATctccttttttcttctttttacgaATTT
GGGAGCTTCGAAAGGAGCTTAAATTAAAACAAGGTCTTAAATCAAGCAAT
CATTGCTGTTATTCTATTGTGATAAGCTAATTGATTATATACATATAATT
GGCTGACATGCTATGGTTTTTTTTAGCATGCGAAAGTTGAAAAGAATCTT
ATTCAGCCTCGGGCTTGCAAGAAGAAAACCAAATTGTTCACTGGCCCATG
TGTGTGATACCCTTATGGTATGTTAATTTTGCAAGGTTTTTTAAATTAAC
CATTTTTATTATATTACTTCCGAACTTAAGCTTCATATTCAGTTATTTTC
TTGCTACATaatataatttattttattgaagGGTGTTTTTTTACATGGGG
CTggaattgttggtttgccgtcacccgaccctagattttggaggtgggtg
gGTCAgtcggaaaaaaaaattattttgaggatTTATGAAATCTTTGTCCA
CACAGCTTTACAtgtaggtaattttgaatggaaaacGGAAGAGCGCTAGC
AGGGAATtcacgattcttatgcttgagacagaCAAGATATGAGTCcttct
taaaaatggcaataaaatattttgggtTGGAAGTCCTGCCTGGTTGGTTG
TCAATCTATAAAGCAATTAACCCCATTCACCATATTTTTCTaccaatgaa
ttttaaattcttCTAAATTTTCAATCAATAATCTATTTTCTACATAATAT
TACCCTGTTCTTTCTAGACTGAAATTCAAGGAAGTGGAAGCTTGCTAGGA
TATAGATGTATGCATCAGAAATTGCGTGTAATCCATAACATTCAAATCAG
CAGGTAGAAATCAATCTTTTTAGTTTATTTCTTGCTTTGTGAAGCCCTTT
TTAAGGATTTCAATTTTCTGCAGTCTCTTAGAAGTGCTATCATCCAAACC
TAAAGCTCGTAAATCATGCTTAGGTAAAATCTTATTTGATTTCATTTACA
ATTCAGAAACAATGTGATGAATCTTCAAAAGGCTATCGACCCTATTGGTG
TTGCTGAGCGCCGTGCTAGGAAATTAAAGAGAAGAAGATACATCACACCT
GTAAAGATTAAGTTTGAAACTATTATAATTTTGACATACTTTTTGGTCTG
TAATAAGGAGATTAGATTGTAAAACTTGTTCTCTTAAAATGTCTTTAACG
ATTAAAAACCTTCAGGTTGGGTCAGAAATCATCCTAGTGAGGATAAATCA
ATATCCAAATATATAACAGTTTTCCAGTAAGATATAGCTTGCAAGagcat
tttgcataaattaattattttgagCATAAGTGAACTTGTATTTTTAGGGT
CCTAACTATTTGTGGCACCTGGATGGTTACGATAAGCTGAAACGATATGG
GATATGTATACATGGTTGTATTGACGGGTAATTTAGCAAGTTTTGTTGAT
TAAAAAAGGGGAAATCTAAAATGGCGTGAATTAGCAGttagattttaaaa
ttaaagaaTCAAAATAATATCTAGTTCTAAAGTTCTATGGttaaaaatct
ttgaatttgATTTATTAAAAGGCTTTTGCCtgactttttgtactttttga
aaagctttacATTACataatattctcaacttcagttgagctagaatctga
gaatgtctgtgtatctgtgtgtgtgtatgtgtgtgtgtctgtcaccaaaa
ctttggggcaggctggagacttcaaaaacggtccgattgggctgaaattt
ttcacacttgatccttgggcaaatccctgggggtgtttttttcatttttt
caaaattttgatttttggggcctggggacgagtttttcgccaaaacgcgg
ctaaaactttggggcaggctggagacttcaaaaatggtccgattgggctg
aaattttgcccccttgatccttgggcaaattcctgggttttttttttcat
tttttcaaaattttgatttttggggcctggggacgagtttttcgccaaaa
cgaggctaaaactttggggcaggctggagacttcaaaaatggtccgattg
ggctgaaattttgcacacttgatccttgggcaaattcctgggtttttttt
tttcattttttcaaaattttgatttttgggaccTTGGGACGAGTTATTCG
ccaaacgaggctaaaactttggggcaggctggagacttcaaaaatggtcc
gatttggctgaaattttgcacacttgatccttgggcacaTCCCTGGGggc
atttttttcacttttccaaaattttgatttttggggcctggcgacgagtt
tttcgccaaaatgctataatttttcttaagccattaagtttacaattggg
cctacgaatgatttcaaagatactgaagttgagccagtgcggttagcacg
ttcgacagtttaTTATATAGATGAATAAAAGATAAATTAAGAccttattt
aattttttgaattttatttttgtagcTATTCCAGAAAGTTGATCTGGTTG
GAAGCAGCATCTACTAACAATTGTCCAGCTGTTGTGGCTGGCTTTTTTCT
CAATCAAGTTAAATCACTCAAAGGTACGTTTATTTCTTCAATTAAAAAAG
GTAAATCATTTAACAAGGTTTTGAAAATAACGACGGTCAACTTTGATGAC
TCTTTGTTGCATTAGGAGAAAAAGCATTTCTCGATGAGAATTTTCACTGA
ATACAAATATTGAATTTTTGTTGTTATCTTTAAGAATTATACAAATATTA
CAAAACTTTTTCTGAATCGCCCGGTGTAGATTTTAGAGATACTGTATGAA
ACTTGTGTCCCCAGATACTGGGTCTCAAGATCCTCTATGggtgtttttca
tattttggaaATTCTCATTTTTGGGGCCTTGGGACGAGGAGGTAAAGGAG
GTAAATTCTTTTTGGCAGCCCGGAAACTGGACGGGTCCGAtcagctgaaa
ctttttacACTTGTTTCTTGAATTATATACAGCNTTTGGGGCCTTGGGAC
GAGGAGGTAAAGGAGGTAAATTCTTTTTGGCAGCCCGGAAACTGGACGGG
TCCGAtcagctgaaactttttacACTTGTTTCTTAAATTATATACAGTAC
CCTGACTAAAACTTAAGATAACCTTAAGGTGATCCAGGCTGTTAGCACGT
TAGACAGTACTAGAAGGAGTTGTAATTATTTCGTTGAGAAATTATAATAA
AGATTATTATAATATTAACTTTTAGGTACTGCGTTAAACGTTCGTGCAGA
CAGAGGAACAGAAAACTCGAACATCGCTGGAATACAGAGGCTTTTTCGCT
CAAACGACAATGACTTCCAAGCTATTGAAAAAAGTTTCCGATTTGGCAGG
TCAACTTCAAATCAAGTAAACTCCATtttatatttaaatattttttagtt
tttaggcaATGTCCCTTTACCAAATAGTTTACAAATTTCCATTGAAATGG
AAAAATACATTCAATATGAATGTATAGATGAAAGATAATCCTTCAATGTT
TGAATTGCTTACAAGGAATAAGgatttaaatgaaaaatctttctacCCTT
TGATACAATGTGCGGCTAGATCTTTCCAGAATAACCTCAATCTCAATTAC
GTCCATAAATTAAAGGGTGNCTAGATCTTTCCAGAATAACCTCCATCTCA
ATTACGTCCATAAATTAAAGGGTGTTTGATGTACTGAAGTTAAAATTCAT
TACAATAATGAATTTCTAGCttaaatacagggtgtccgaaAAAATGTCAG
AAGACTGCTATGGGTAGAAAGTCTTTGTGTGTGTATCACaaacaaaatcc
gaaaaatgaACTTGGATGTTAAGTTATTTGAGTAAACGTTAATAAATGTT
TTTATGATAAAACATATTACAGACGCAGTAACCGAGTCATGATCTACATA
CGTTCAAATTCTAATGGCAACTGTACTATAGGTTTGTAACGGTATACAAG
GTTTCCGAGCACGCAATCTCCCATCCCGATTCCAGGAAACCAGCCACGTT
ATCTACTCTTCGATcatttttttcgtgtttttttttatgaatataatttt
atttcttttttttattacgCACGTTACTTATTTTTATAGATCGTCGACCA
AAAAAATGCGAGCGTGTTTATTGGTCAAGAGCATTGACataaatgcaata
ttttgttGCATTAAGAAAAACTTTGCGATACACACACAAACACTTTCTAC
TCGNTCAAGAGCATTGACATAAATGCAATATTTCATATTTATGCTGTTGC
ATTAAGAAAAACTTTGCGATACACACACCAACACTTTCTACTCATAGCAG
TGGTCTGATCGGATAcattttttccggacaccctgtagagaATAATTGAC
TTTCCAATTTAGAGAATTGAAGCATTTTGGTCTCAATTGAAGCGGTCACT
GACTCAATGGTGGATGAACTTTTTTAAGGTAATTTATTCCCTCATTGTTT
CCCAACAACCCAGAgaattttggctgaaatcttttgtaattttttcttgc
ATTAGTACCTGGTAGAGTTTCTTCTGACTTTAAATCCTGAAATTGACAGA
ATTGCTTTTTGTggggataatttttttaagagaTACCAAAATCGAGCCAG
TTCGATGAACAAGGTTGACAGTTTTGACCAATCATACTGCAGCTGTTTTT
TATTACATGTATATGAATTTTCCAGGACATGATTGACGATGGAACATTTG
ATGAATCTGATGAAATTCAAAGGTACACGAGAATATAAATTATTGTCAAt
agaaaaacaatagaaaatggATTCAATTTAATggatttaaattttgaaaa
atgaaagctCTGCTCGCCCTCTGAATGAATTGAATGAATTCTAACCGGTG
AAGAGTTTTGACCTAAATTCAATGGACTTggatttttgaccaaaaattat
GACCAGACCAGCAATAGCGAGTGGCCACGgatttgaaaagtgaaattaaa
atgtaacatttaaaagaaaatgagaTCCAGATAAACTGAATTGACCCCCA
CGCGaacttttttaaatcattttcaagtCTTTTGAATTGTTataattcta
aaaatgtttGCATTTAAAAGAGCAATTTTACACAAATAacgattttaaaa
atataaattacaTTCCGCCAATAGTACTTGTTATCTACCGTAACGCTCTC
CTGTTCTCCTTTTAAGTAAAATTAATGGtacaattatttatttttaggga
atgtttaaaattttgttttctccaACTGATTCAAAAAGAGTTAGATGATT
TCAAACTAATACACAACACTCACAGAAGAAGTAACGAAACAACTGGTGGA
AAGCCGGAACTTTTGTACAGCATGCCAAATTATTTCGGTAAGCTGTAACA
TTTGGTTACATTCGGTACTTAAGTCCATCGAAAAACTATGTGGAAACTTC
ACATTTAATGTTGTAGGTCCTTCAAATGGGTCTAATTGCCTATTTTTTGG
CCATTTAGGCCTACTTTGTAGCGCTGTAATTTATCACTTGCAAAACATAA
ACAGGTAGAAAACGGAGGTGCACACTATGGCAGGAATACCTTACgagttt
taaaagctctatgtTATAATCTATGATTGGCTATTCGCAATTCAGGTGCC
ACCGACTTTATGTGGAATGTTCGTGAAGCTGAAATAAATGTTGCTGAAGC
GTATTGTCGTACACCGAACGTTTTTGGTTGTggaaa

Coding sequence (CDS) from alignment at sc0001353:32824..39859+

>TCONS_00035698 ID=TCONS_00035698|Name=TCONS_00035698|organism=Clytia hemisphaerica|type=CDS|length=9300bp|location=Sequence derived from alignment at sc0001353:32824..39859+ (Clytia hemisphaerica)
ATGCGAAAGTTGAAAAGAATCTTATTCAGCCTCGGGCTTGCAAGAAGAAA
ACCAAATTGTTCACTGGCCCATGTGTGTGATACCCTTATGACTGAAATTC
AAGGAAGTGGAAGCTTGCTAGGATATAGATGTATGCATCAGAAATTGCGT
GTAATCCATAACATTCAAATCAGCAGAAACAATGTGATGAATCTTCAAAA
GGCTATCGACCCTATTGGTGTTGCTGAGCGCCGTGCTAGGAAATTAAAGA
GAAGAAGATACATCACACCTGGTCCTAACTATTTGTGGCACCTGGATGGT
TACGATAAGCTGAAACGATATGGGATATGTATACATGGTTGTATTGACGG
cTATTCCAGAAAGTTGATCTGGTTGGAAGCAGCATCTACTAACAATTGTC
CAGCTGTTGTGGCTGGCTTTTTTCTCAATCAAGTTAAATCACTCAAAGGT
ACTGCGTTAAACGTTCGTGCAGACAGAGGAACAGAAAACTCGAACATCGC
TGGAATACAGAGGCTTTTTCGCTCAAACGACAATGACTTCCAAGCTATTG
AAAAAAGTTTCCGATTTGGCAGGTCAACTTCAAATCAAAGAATTGAAGCA
TTTTGGTCTCAATTGAAGCGGTCACTGACTCAATGGTGGATGAACTTTTT
TAAGGACATGATTGACGATGGAACATTTGATGAATCTGATGAAATTCAAA
GggaatgtttaaaattttgttttctccaACTGATTCAAAAAGAGTTAGAT
GATTTCAAACTAATACACAACACTCACAGAAGAAGTAACGAAACAACTGG
TGGAAAGCCGGAACTTTTGTACAGCATGCCAAATTATTTCGGTGCCACCG
ACTTTATGTGGAATGTTCGTGAAGCTGAAATAAATGTTGCTGAAGCGTAT
TGTCGTACACCGAACGTTTTTGGTTGTggaATGCGAAAGTTGAAAAGAAT
CTTATTCAGCCTCGGGCTTGCAAGAAGAAAACCAAATTGTTCACTGGCCC
ATGTGTGTGATACCCTTATGACTGAAATTCAAGGAAGTGGAAGCTTGCTA
GGATATAGATGTATGCATCAGAAATTGCGTGTAATCCATAACATTCAAAT
CAGCAGAAACAATGTGATGAATCTTCAAAAGGCTATCGACCCTATTGGTG
TTGCTGAGCGCCGTGCTAGGAAATTAAAGAGAAGAAGATACATCACACCT
GGTCCTAACTATTTGTGGCACCTGGATGGTTACGATAAGCTGAAACGATA
TGGGATATGTATACATGGTTGTATTGACGGcTATTCCAGAAAGTTGATCT
GGTTGGAAGCAGCATCTACTAACAATTGTCCAGCTGTTGTGGCTGGCTTT
TTTCTCAATCAAGTTAAATCACTCAAAGGTACTGCGTTAAACGTTCGTGC
AGACAGAGGAACAGAAAACTCGAACATCGCTGGAATACAGAGGCTTTTTC
GCTCAAACGACAATGACTTCCAAGCTATTGAAAAAAGTTTCCGATTTGGC
AGGTCAACTTCAAATCAAAGAATTGAAGCATTTTGGTCTCAATTGAAGCG
GTCACTGACTCAATGGTGGATGAACTTTTTTAAGGACATGATTGACGATG
GAACATTTGATGAATCTGATGAAATTCAAAGggaatgtttaaaattttgt
tttctccaACTGATTCAAAAAGAGTTAGATGATTTCAAACTAATACACAA
CACTCACAGAAGAAGTAACGAAACAACTGGTGGAAAGCCGGAACTTTTGT
ACAGCATGCCAAATTATTTCGGTGCCACCGACTTTATGTGGAATGTTCGT
GAAGCTGAAATAAATGTTGCTGAAGCGTATTGTCGTACACCGAACGTTTT
TGGTTGTggaATGCGAAAGTTGAAAAGAATCTTATTCAGCCTCGGGCTTG
CAAGAAGAAAACCAAATTGTTCACTGGCCCATGTGTGTGATACCCTTATG
ACTGAAATTCAAGGAAGTGGAAGCTTGCTAGGATATAGATGTATGCATCA
GAAATTGCGTGTAATCCATAACATTCAAATCAGCAGAAACAATGTGATGA
ATCTTCAAAAGGCTATCGACCCTATTGGTGTTGCTGAGCGCCGTGCTAGG
AAATTAAAGAGAAGAAGATACATCACACCTGGTCCTAACTATTTGTGGCA
CCTGGATGGTTACGATAAGCTGAAACGATATGGGATATGTATACATGGTT
GTATTGACGGcTATTCCAGAAAGTTGATCTGGTTGGAAGCAGCATCTACT
AACAATTGTCCAGCTGTTGTGGCTGGCTTTTTTCTCAATCAAGTTAAATC
ACTCAAAGGTACTGCGTTAAACGTTCGTGCAGACAGAGGAACAGAAAACT
CGAACATCGCTGGAATACAGAGGCTTTTTCGCTCAAACGACAATGACTTC
CAAGCTATTGAAAAAAGTTTCCGATTTGGCAGGTCAACTTCAAATCAAAG
AATTGAAGCATTTTGGTCTCAATTGAAGCGGTCACTGACTCAATGGTGGA
TGAACTTTTTTAAGGACATGATTGACGATGGAACATTTGATGAATCTGAT
GAAATTCAAAGggaatgtttaaaattttgttttctccaACTGATTCAAAA
AGAGTTAGATGATTTCAAACTAATACACAACACTCACAGAAGAAGTAACG
AAACAACTGGTGGAAAGCCGGAACTTTTGTACAGCATGCCAAATTATTTC
GGTGCCACCGACTTTATGTGGAATGTTCGTGAAGCTGAAATAAATGTTGC
TGAAGCGTATTGTCGTACACCGAACGTTTTTGGTTGTggaATGCGAAAGT
TGAAAAGAATCTTATTCAGCCTCGGGCTTGCAAGAAGAAAACCAAATTGT
TCACTGGCCCATGTGTGTGATACCCTTATGACTGAAATTCAAGGAAGTGG
AAGCTTGCTAGGATATAGATGTATGCATCAGAAATTGCGTGTAATCCATA
ACATTCAAATCAGCAGAAACAATGTGATGAATCTTCAAAAGGCTATCGAC
CCTATTGGTGTTGCTGAGCGCCGTGCTAGGAAATTAAAGAGAAGAAGATA
CATCACACCTGGTCCTAACTATTTGTGGCACCTGGATGGTTACGATAAGC
TGAAACGATATGGGATATGTATACATGGTTGTATTGACGGcTATTCCAGA
AAGTTGATCTGGTTGGAAGCAGCATCTACTAACAATTGTCCAGCTGTTGT
GGCTGGCTTTTTTCTCAATCAAGTTAAATCACTCAAAGGTACTGCGTTAA
ACGTTCGTGCAGACAGAGGAACAGAAAACTCGAACATCGCTGGAATACAG
AGGCTTTTTCGCTCAAACGACAATGACTTCCAAGCTATTGAAAAAAGTTT
CCGATTTGGCAGGTCAACTTCAAATCAAAGAATTGAAGCATTTTGGTCTC
AATTGAAGCGGTCACTGACTCAATGGTGGATGAACTTTTTTAAGGACATG
ATTGACGATGGAACATTTGATGAATCTGATGAAATTCAAAGggaatgttt
aaaattttgttttctccaACTGATTCAAAAAGAGTTAGATGATTTCAAAC
TAATACACAACACTCACAGAAGAAGTAACGAAACAACTGGTGGAAAGCCG
GAACTTTTGTACAGCATGCCAAATTATTTCGGTGCCACCGACTTTATGTG
GAATGTTCGTGAAGCTGAAATAAATGTTGCTGAAGCGTATTGTCGTACAC
CGAACGTTTTTGGTTGTggaATGCGAAAGTTGAAAAGAATCTTATTCAGC
CTCGGGCTTGCAAGAAGAAAACCAAATTGTTCACTGGCCCATGTGTGTGA
TACCCTTATGACTGAAATTCAAGGAAGTGGAAGCTTGCTAGGATATAGAT
GTATGCATCAGAAATTGCGTGTAATCCATAACATTCAAATCAGCAGAAAC
AATGTGATGAATCTTCAAAAGGCTATCGACCCTATTGGTGTTGCTGAGCG
CCGTGCTAGGAAATTAAAGAGAAGAAGATACATCACACCTGGTCCTAACT
ATTTGTGGCACCTGGATGGTTACGATAAGCTGAAACGATATGGGATATGT
ATACATGGTTGTATTGACGGcTATTCCAGAAAGTTGATCTGGTTGGAAGC
AGCATCTACTAACAATTGTCCAGCTGTTGTGGCTGGCTTTTTTCTCAATC
AAGTTAAATCACTCAAAGGTACTGCGTTAAACGTTCGTGCAGACAGAGGA
ACAGAAAACTCGAACATCGCTGGAATACAGAGGCTTTTTCGCTCAAACGA
CAATGACTTCCAAGCTATTGAAAAAAGTTTCCGATTTGGCAGGTCAACTT
CAAATCAAAGAATTGAAGCATTTTGGTCTCAATTGAAGCGGTCACTGACT
CAATGGTGGATGAACTTTTTTAAGGACATGATTGACGATGGAACATTTGA
TGAATCTGATGAAATTCAAAGggaatgtttaaaattttgttttctccaAC
TGATTCAAAAAGAGTTAGATGATTTCAAACTAATACACAACACTCACAGA
AGAAGTAACGAAACAACTGGTGGAAAGCCGGAACTTTTGTACAGCATGCC
AAATTATTTCGGTGCCACCGACTTTATGTGGAATGTTCGTGAAGCTGAAA
TAAATGTTGCTGAAGCGTATTGTCGTACACCGAACGTTTTTGGTTGTgga
ATGCGAAAGTTGAAAAGAATCTTATTCAGCCTCGGGCTTGCAAGAAGAAA
ACCAAATTGTTCACTGGCCCATGTGTGTGATACCCTTATGACTGAAATTC
AAGGAAGTGGAAGCTTGCTAGGATATAGATGTATGCATCAGAAATTGCGT
GTAATCCATAACATTCAAATCAGCAGAAACAATGTGATGAATCTTCAAAA
GGCTATCGACCCTATTGGTGTTGCTGAGCGCCGTGCTAGGAAATTAAAGA
GAAGAAGATACATCACACCTGGTCCTAACTATTTGTGGCACCTGGATGGT
TACGATAAGCTGAAACGATATGGGATATGTATACATGGTTGTATTGACGG
cTATTCCAGAAAGTTGATCTGGTTGGAAGCAGCATCTACTAACAATTGTC
CAGCTGTTGTGGCTGGCTTTTTTCTCAATCAAGTTAAATCACTCAAAGGT
ACTGCGTTAAACGTTCGTGCAGACAGAGGAACAGAAAACTCGAACATCGC
TGGAATACAGAGGCTTTTTCGCTCAAACGACAATGACTTCCAAGCTATTG
AAAAAAGTTTCCGATTTGGCAGGTCAACTTCAAATCAAAGAATTGAAGCA
TTTTGGTCTCAATTGAAGCGGTCACTGACTCAATGGTGGATGAACTTTTT
TAAGGACATGATTGACGATGGAACATTTGATGAATCTGATGAAATTCAAA
GggaatgtttaaaattttgttttctccaACTGATTCAAAAAGAGTTAGAT
GATTTCAAACTAATACACAACACTCACAGAAGAAGTAACGAAACAACTGG
TGGAAAGCCGGAACTTTTGTACAGCATGCCAAATTATTTCGGTGCCACCG
ACTTTATGTGGAATGTTCGTGAAGCTGAAATAAATGTTGCTGAAGCGTAT
TGTCGTACACCGAACGTTTTTGGTTGTggaATGCGAAAGTTGAAAAGAAT
CTTATTCAGCCTCGGGCTTGCAAGAAGAAAACCAAATTGTTCACTGGCCC
ATGTGTGTGATACCCTTATGACTGAAATTCAAGGAAGTGGAAGCTTGCTA
GGATATAGATGTATGCATCAGAAATTGCGTGTAATCCATAACATTCAAAT
CAGCAGAAACAATGTGATGAATCTTCAAAAGGCTATCGACCCTATTGGTG
TTGCTGAGCGCCGTGCTAGGAAATTAAAGAGAAGAAGATACATCACACCT
GGTCCTAACTATTTGTGGCACCTGGATGGTTACGATAAGCTGAAACGATA
TGGGATATGTATACATGGTTGTATTGACGGcTATTCCAGAAAGTTGATCT
GGTTGGAAGCAGCATCTACTAACAATTGTCCAGCTGTTGTGGCTGGCTTT
TTTCTCAATCAAGTTAAATCACTCAAAGGTACTGCGTTAAACGTTCGTGC
AGACAGAGGAACAGAAAACTCGAACATCGCTGGAATACAGAGGCTTTTTC
GCTCAAACGACAATGACTTCCAAGCTATTGAAAAAAGTTTCCGATTTGGC
AGGTCAACTTCAAATCAAAGAATTGAAGCATTTTGGTCTCAATTGAAGCG
GTCACTGACTCAATGGTGGATGAACTTTTTTAAGGACATGATTGACGATG
GAACATTTGATGAATCTGATGAAATTCAAAGggaatgtttaaaattttgt
tttctccaACTGATTCAAAAAGAGTTAGATGATTTCAAACTAATACACAA
CACTCACAGAAGAAGTAACGAAACAACTGGTGGAAAGCCGGAACTTTTGT
ACAGCATGCCAAATTATTTCGGTGCCACCGACTTTATGTGGAATGTTCGT
GAAGCTGAAATAAATGTTGCTGAAGCGTATTGTCGTACACCGAACGTTTT
TGGTTGTggaATGCGAAAGTTGAAAAGAATCTTATTCAGCCTCGGGCTTG
CAAGAAGAAAACCAAATTGTTCACTGGCCCATGTGTGTGATACCCTTATG
ACTGAAATTCAAGGAAGTGGAAGCTTGCTAGGATATAGATGTATGCATCA
GAAATTGCGTGTAATCCATAACATTCAAATCAGCAGAAACAATGTGATGA
ATCTTCAAAAGGCTATCGACCCTATTGGTGTTGCTGAGCGCCGTGCTAGG
AAATTAAAGAGAAGAAGATACATCACACCTGGTCCTAACTATTTGTGGCA
CCTGGATGGTTACGATAAGCTGAAACGATATGGGATATGTATACATGGTT
GTATTGACGGcTATTCCAGAAAGTTGATCTGGTTGGAAGCAGCATCTACT
AACAATTGTCCAGCTGTTGTGGCTGGCTTTTTTCTCAATCAAGTTAAATC
ACTCAAAGGTACTGCGTTAAACGTTCGTGCAGACAGAGGAACAGAAAACT
CGAACATCGCTGGAATACAGAGGCTTTTTCGCTCAAACGACAATGACTTC
CAAGCTATTGAAAAAAGTTTCCGATTTGGCAGGTCAACTTCAAATCAAAG
AATTGAAGCATTTTGGTCTCAATTGAAGCGGTCACTGACTCAATGGTGGA
TGAACTTTTTTAAGGACATGATTGACGATGGAACATTTGATGAATCTGAT
GAAATTCAAAGggaatgtttaaaattttgttttctccaACTGATTCAAAA
AGAGTTAGATGATTTCAAACTAATACACAACACTCACAGAAGAAGTAACG
AAACAACTGGTGGAAAGCCGGAACTTTTGTACAGCATGCCAAATTATTTC
GGTGCCACCGACTTTATGTGGAATGTTCGTGAAGCTGAAATAAATGTTGC
TGAAGCGTATTGTCGTACACCGAACGTTTTTGGTTGTggaATGCGAAAGT
TGAAAAGAATCTTATTCAGCCTCGGGCTTGCAAGAAGAAAACCAAATTGT
TCACTGGCCCATGTGTGTGATACCCTTATGACTGAAATTCAAGGAAGTGG
AAGCTTGCTAGGATATAGATGTATGCATCAGAAATTGCGTGTAATCCATA
ACATTCAAATCAGCAGAAACAATGTGATGAATCTTCAAAAGGCTATCGAC
CCTATTGGTGTTGCTGAGCGCCGTGCTAGGAAATTAAAGAGAAGAAGATA
CATCACACCTGGTCCTAACTATTTGTGGCACCTGGATGGTTACGATAAGC
TGAAACGATATGGGATATGTATACATGGTTGTATTGACGGcTATTCCAGA
AAGTTGATCTGGTTGGAAGCAGCATCTACTAACAATTGTCCAGCTGTTGT
GGCTGGCTTTTTTCTCAATCAAGTTAAATCACTCAAAGGTACTGCGTTAA
ACGTTCGTGCAGACAGAGGAACAGAAAACTCGAACATCGCTGGAATACAG
AGGCTTTTTCGCTCAAACGACAATGACTTCCAAGCTATTGAAAAAAGTTT
CCGATTTGGCAGGTCAACTTCAAATCAAAGAATTGAAGCATTTTGGTCTC
AATTGAAGCGGTCACTGACTCAATGGTGGATGAACTTTTTTAAGGACATG
ATTGACGATGGAACATTTGATGAATCTGATGAAATTCAAAGggaatgttt
aaaattttgttttctccaACTGATTCAAAAAGAGTTAGATGATTTCAAAC
TAATACACAACACTCACAGAAGAAGTAACGAAACAACTGGTGGAAAGCCG
GAACTTTTGTACAGCATGCCAAATTATTTCGGTGCCACCGACTTTATGTG
GAATGTTCGTGAAGCTGAAATAAATGTTGCTGAAGCGTATTGTCGTACAC
CGAACGTTTTTGGTTGTggaATGCGAAAGTTGAAAAGAATCTTATTCAGC
CTCGGGCTTGCAAGAAGAAAACCAAATTGTTCACTGGCCCATGTGTGTGA
TACCCTTATGACTGAAATTCAAGGAAGTGGAAGCTTGCTAGGATATAGAT
GTATGCATCAGAAATTGCGTGTAATCCATAACATTCAAATCAGCAGAAAC
AATGTGATGAATCTTCAAAAGGCTATCGACCCTATTGGTGTTGCTGAGCG
CCGTGCTAGGAAATTAAAGAGAAGAAGATACATCACACCTGGTCCTAACT
ATTTGTGGCACCTGGATGGTTACGATAAGCTGAAACGATATGGGATATGT
ATACATGGTTGTATTGACGGcTATTCCAGAAAGTTGATCTGGTTGGAAGC
AGCATCTACTAACAATTGTCCAGCTGTTGTGGCTGGCTTTTTTCTCAATC
AAGTTAAATCACTCAAAGGTACTGCGTTAAACGTTCGTGCAGACAGAGGA
ACAGAAAACTCGAACATCGCTGGAATACAGAGGCTTTTTCGCTCAAACGA
CAATGACTTCCAAGCTATTGAAAAAAGTTTCCGATTTGGCAGGTCAACTT
CAAATCAAAGAATTGAAGCATTTTGGTCTCAATTGAAGCGGTCACTGACT
CAATGGTGGATGAACTTTTTTAAGGACATGATTGACGATGGAACATTTGA
TGAATCTGATGAAATTCAAAGggaatgtttaaaattttgttttctccaAC
TGATTCAAAAAGAGTTAGATGATTTCAAACTAATACACAACACTCACAGA
AGAAGTAACGAAACAACTGGTGGAAAGCCGGAACTTTTGTACAGCATGCC
AAATTATTTCGGTGCCACCGACTTTATGTGGAATGTTCGTGAAGCTGAAA
TAAATGTTGCTGAAGCGTATTGTCGTACACCGAACGTTTTTGGTTGTgga
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_020927XLOC_020927Clytia hemisphaericagene
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00035698-proteinTCONS_00035698-proteinClytia hemisphaericapolypeptide
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00035698-exon-sc0001353-1491911889:32824..32871TCONS_00035698-exon-sc0001353-1491911889:32824..32871Clytia hemisphaericaexon
TCONS_00035698-exon-sc0001353-1510915933:32824..32871TCONS_00035698-exon-sc0001353-1510915933:32824..32871Clytia hemisphaericaexon
TCONS_00035698-exon-sc0001353-1575043694:32824..32871TCONS_00035698-exon-sc0001353-1575043694:32824..32871Clytia hemisphaericaexon
TCONS_00035698-exon-sc0001353-1491911889:33944..34031TCONS_00035698-exon-sc0001353-1491911889:33944..34031Clytia hemisphaericaexon
TCONS_00035698-exon-sc0001353-1510915933:33944..34031TCONS_00035698-exon-sc0001353-1510915933:33944..34031Clytia hemisphaericaexon
TCONS_00035698-exon-sc0001353-1575043694:33944..34031TCONS_00035698-exon-sc0001353-1575043694:33944..34031Clytia hemisphaericaexon
TCONS_00035698-exon-sc0001353-1491911889:34350..34440TCONS_00035698-exon-sc0001353-1491911889:34350..34440Clytia hemisphaericaexon
TCONS_00035698-exon-sc0001353-1510915933:34350..34440TCONS_00035698-exon-sc0001353-1510915933:34350..34440Clytia hemisphaericaexon
TCONS_00035698-exon-sc0001353-1575043694:34350..34440TCONS_00035698-exon-sc0001353-1575043694:34350..34440Clytia hemisphaericaexon
TCONS_00035698-exon-sc0001353-1491911889:34941..35026TCONS_00035698-exon-sc0001353-1491911889:34941..35026Clytia hemisphaericaexon
TCONS_00035698-exon-sc0001353-1510915933:34941..35026TCONS_00035698-exon-sc0001353-1510915933:34941..35026Clytia hemisphaericaexon
TCONS_00035698-exon-sc0001353-1575043694:34941..35026TCONS_00035698-exon-sc0001353-1575043694:34941..35026Clytia hemisphaericaexon
TCONS_00035698-exon-sc0001353-1491911889:35180..35273TCONS_00035698-exon-sc0001353-1491911889:35180..35273Clytia hemisphaericaexon
TCONS_00035698-exon-sc0001353-1510915933:35180..35273TCONS_00035698-exon-sc0001353-1510915933:35180..35273Clytia hemisphaericaexon
TCONS_00035698-exon-sc0001353-1575043694:35180..35273TCONS_00035698-exon-sc0001353-1575043694:35180..35273Clytia hemisphaericaexon
TCONS_00035698-exon-sc0001353-1491911889:35521..35600TCONS_00035698-exon-sc0001353-1491911889:35521..35600Clytia hemisphaericaexon
TCONS_00035698-exon-sc0001353-1510915933:35521..35600TCONS_00035698-exon-sc0001353-1510915933:35521..35600Clytia hemisphaericaexon
TCONS_00035698-exon-sc0001353-1575043694:35521..35600TCONS_00035698-exon-sc0001353-1575043694:35521..35600Clytia hemisphaericaexon
TCONS_00035698-exon-sc0001353-1491911889:36649..36746TCONS_00035698-exon-sc0001353-1491911889:36649..36746Clytia hemisphaericaexon
TCONS_00035698-exon-sc0001353-1510915933:36649..36746TCONS_00035698-exon-sc0001353-1510915933:36649..36746Clytia hemisphaericaexon
TCONS_00035698-exon-sc0001353-1575043694:36649..36746TCONS_00035698-exon-sc0001353-1575043694:36649..36746Clytia hemisphaericaexon
TCONS_00035698-exon-sc0001353-1491911889:37399..37538TCONS_00035698-exon-sc0001353-1491911889:37399..37538Clytia hemisphaericaexon
TCONS_00035698-exon-sc0001353-1510915933:37399..37538TCONS_00035698-exon-sc0001353-1510915933:37399..37538Clytia hemisphaericaexon
TCONS_00035698-exon-sc0001353-1575043694:37399..37538TCONS_00035698-exon-sc0001353-1575043694:37399..37538Clytia hemisphaericaexon
TCONS_00035698-exon-sc0001353-1491911889:38536..38601TCONS_00035698-exon-sc0001353-1491911889:38536..38601Clytia hemisphaericaexon
TCONS_00035698-exon-sc0001353-1510915933:38536..38601TCONS_00035698-exon-sc0001353-1510915933:38536..38601Clytia hemisphaericaexon
TCONS_00035698-exon-sc0001353-1575043694:38536..38601TCONS_00035698-exon-sc0001353-1575043694:38536..38601Clytia hemisphaericaexon
TCONS_00035698-exon-sc0001353-1491911889:38849..38895TCONS_00035698-exon-sc0001353-1491911889:38849..38895Clytia hemisphaericaexon
TCONS_00035698-exon-sc0001353-1510915933:38849..38895TCONS_00035698-exon-sc0001353-1510915933:38849..38895Clytia hemisphaericaexon
TCONS_00035698-exon-sc0001353-1575043694:38849..38895TCONS_00035698-exon-sc0001353-1575043694:38849..38895Clytia hemisphaericaexon
TCONS_00035698-exon-sc0001353-1491911889:39371..39510TCONS_00035698-exon-sc0001353-1491911889:39371..39510Clytia hemisphaericaexon
TCONS_00035698-exon-sc0001353-1510915933:39371..39510TCONS_00035698-exon-sc0001353-1510915933:39371..39510Clytia hemisphaericaexon
TCONS_00035698-exon-sc0001353-1575043694:39371..39510TCONS_00035698-exon-sc0001353-1575043694:39371..39510Clytia hemisphaericaexon
TCONS_00035698-exon-sc0001353-1491911889:39769..39859TCONS_00035698-exon-sc0001353-1491911889:39769..39859Clytia hemisphaericaexon
TCONS_00035698-exon-sc0001353-1510915933:39769..39859TCONS_00035698-exon-sc0001353-1510915933:39769..39859Clytia hemisphaericaexon
TCONS_00035698-exon-sc0001353-1575043694:39769..39859TCONS_00035698-exon-sc0001353-1575043694:39769..39859Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0001353supercontigsc0001353:32824..39859 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
1.34819	0.0556079	1.28543	0.161667	47.0787	28.8219	33.0108	27.4815	12.1648	5.96528	10.2618	6.37598	8.98631	5.4329	5.81389	5.89524	8.91225	1.40135	3.00847	10.8097	7.47747	5.51378	2.86016	11.8923	5.0462	1.41932	2.87904	0	3.82061	2.40241
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR012337RNaseH-like_dom
Vocabulary: Molecular Function
TermDefinition
GO:0003676nucleic acid binding
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0003676 nucleic acid binding
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00035698 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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