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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00035669 ID=TCONS_00035669|Name=TCONS_00035669|organism=Clytia hemisphaerica|type=transcript|length=2252bp CAGCAATCAAAGAGAACCATCAACCATGACAAACTAGTCAAGCTTTATCA TCATCATCTATATCTTATTAACTTGTGCATTTTgaaaatcaacaacaaaa aatcacGCGTATGAGACGTGAAAAAATTCTGTAAGGAGAGAAATAGAGTT GATTTGATAAAGGGAtttgtttaagataaatttTGCATGTTCCTTGTATA GAGGCAAGCTGTTTTTATATCTCGTATAGCAATATTTTTGTCTGAGAATA AAATTTATTGAAGTCGCAAAATGGCATTACCACTTGGGGTGATCATTTTG TTCATTGTCATTGGTTGTATATTGGTTCTTCTCGTCATCGTTGGTATAAT TTGCAAGAAATATTTACGTGgtgattttcaaaacaaacgaaaaatCGACG ATGCTGACGAACCATTACTTGAAGATTGTTATGATGAATTTACTGGCAAA CATGAGACAAAAAAGAACTTCAGCCAAACAAAGGAACTGAATAGCAGTGA AGAAAAAACAGCTGATCAAATCCGTCAGAAATATCGCAAAGATAAAACTT CACAATCATCGCAAGCATCTTCAAGAAAAGGATCAGACAGTTCATCCAGG GATGGTGGTAAACATGGAATAGCTACcagtttgcttgaaaaagctgCAGG ATTCTCGAACGATAGCTCAGACCGAGAAAAAGAGTCTCTTGGATCATCGG CATCAGTTGATCGAGTACCAGCCTGGCAAGCAACCCTTATCCAGGAAGAA AGTGATATACCAGAAACCTCAGATCTAGGAACTGACTTTTCATCTATTGA GTCACAAAGTCCTTTACCAATACTAGAGCCACATTCATCACAAACACAAG ACACCCAACCACCGCCTCCGTACACCCAACACTTACGCCCTGACTCATTA TCAAGTACATTTGCCGGTGAAGCTAGCGTCGTTTTATCATTGAAATATCT ATCAACAACCAATGTGATCATCGGAACTATAAAGAAGCTTGAGAATGTCA ATTTAAATGCTAAAGGAACGCCACGTGATATATCATTTCATTTGAAATTA CTTCCAAAAGGAAAACATCGAATGAAAACACCTTGGCGAGCATCTGGCAC TGAAAATCTATCTTTAACATTTACAATGGGTTCTATTAAGATTTCAAGAA TGGTTCAAGGTGTACTATGTTTGAGATTATATGGAAGATTATTAAGTAGT AGGTTTGCAAGGCCCAAATGTTATGGTGAATGTACGATCAACTTAAAGGA CATCCTTGGTAAAGATGGTGAAGTTGAAATGACATGTCCGTTAACATCTA AAGGACTTTACAAGAGTACAGAAGATCTGAGATTCTCCACTGACGATGAA CTCGAAAATCATTAATCTTCCAAAAATTGTTAtagaattgttttgttttt tatttgcatATTTTATACTTTGTAAGATAAGGTCCCAAATAGTAGGGGGG TTCGAATGCTTCAAAAAAACCCTTAATTAAGGTAATTATAAGCTAAAAAC AGATTATTTAGAGCAAGTCAGCTTGTGGTAGCTaagaatttattcaaaaa taaataaacaattgGAGGGGGTCCTGATTAGAAcggggagggggttggaa aatatttttgaaaattaataaccgGGTGGGGACACGTTTATTCTGGACCT TAGAGTagccaaacttttttttttcgaaataatcTTTCATAAGTTGCTTT TTATATGACCCTGTTAgttagtattttacagactagaCAGTTAAGACAAC GATTCAAATGTAAATAAGTTATTcaatcattcaaaatgaccaatgaaatt gaaattgttaaGTGTCAGGGTATCACTTGTTTTCTCGTACTATGGTTCTC GAAAGTTAGCAAGTTAGGCTGAGTATCCAAgctataaaataatattttat ttttttgatgttttttttctattcatgatattcatgacgtaatgttttct acggaaatactccggttttagccagtattGGTAAAATTAAACTAGataaa agttgtataaaatttaccactacactggcaaaaaccggggtctttcgtag aaaacattacgtcatgaatatcatgaatttacaGTTTAATCTACCTCGAT ATATGTAAACACATGGCATTCCGATTTAAGATTTTCTCAAAGTTAAAAAT CTGCTTTCCGACTGTATTTTAACacacttaaaaatcatttgtggtgttta aaattttgcagagaaatcccctttgtctcaaatatttcgtccatgattgt ac Run BLAST on NCBI protein sequence of TCONS_00035669-protein >TCONS_00035669-protein ID=TCONS_00035669-protein|Name=TCONS_00035669-protein|organism=Clytia hemisphaerica|type=polypeptide|length=364bp
MALPLGVIILFIVIGCILVLLVIVGIICKKYLRGDFQNKRKIDDADEPLL EDCYDEFTGKHETKKNFSQTKELNSSEEKTADQIRQKYRKDKTSQSSQAS SRKGSDSSSRDGGKHGIATSLLEKAAGFSNDSSDREKESLGSSASVDRVP AWQATLIQEESDIPETSDLGTDFSSIESQSPLPILEPHSSQTQDTQPPPP YTQHLRPDSLSSTFAGEASVVLSLKYLSTTNVIIGTIKKLENVNLNAKGT PRDISFHLKLLPKGKHRMKTPWRASGTENLSLTFTMGSIKISRMVQGVLC LRLYGRLLSSRFARPKCYGECTINLKDILGKDGEVEMTCPLTSKGLYKST EDLRFSTDDELENH Run BLAST on NCBI transcript from alignment at sc0001348:30366..34238- Legend: exonfive_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00035669 ID=TCONS_00035669|Name=TCONS_00035669|organism=Clytia hemisphaerica|type=transcript|length=3873bp|location=Sequence derived from alignment at sc0001348:30366..34238- (Clytia hemisphaerica) CAGCAATCAAAGAGAACCATCAACCATGACAAACTAGTCAAGCTTTATCA
TCATCATCTATATCTTATTAACTTGTGCATTTTGAAAATCAACAACAAAA
AATCACGCGTATGAGACGTGAAAAAATTCTGTAAGGAGAGAAATAGAGTT
GATTTGATAAAGGGATTTGTTTAAGATAAATTTTGCATGTTCCTTGTATA
GAGGCAAGCTGTTTTTATATCTCGTATAGCAATATTTTTGTCTGAGAATA
AAATTTATTGAAGTCGCAAAATGGCATTACCACTTGGTAAGATTCTTTGT
ATATTATTGTTTGATTTGAAATGCCTTTAGGATTTCAAATTATGTTGCTT
GCAGCCAGTGACGTGGTGGCAGGGGGGCCAGGGGGTCAGACCCCCCAGCG
GAGCCCTTTTGAGAGGGGGCACCCAAAAATAAAGAGCGCCAAGAAGGATT
TTTCAGGCGCCCATATCGAAAGATTGACAAATGAAAAAACAAAAATGGCG
CCCCTCATCACCTCAAAAACTCAAAATTTTCTGGCTCGTTTCGCTCGCAC
ACTCCCTTTTTTGTATTGTATTCGTAAGTAAAATGAGCGTATATATAGAG
AGGGGCGCCAAAAACAAAAAATCTTTTAAAAGGGCACCATATTTGCCTTG
GCCACCACAGAGAAATTTTCCCACCACGCCACTGCTTGCAGCTCAAAGAA
TCCAGTTGTTATTCTTCAGCAATTTCTTAAAATTTAAGTTCATTCCTAAG
CGTCTTTTTGCAATTTGGAAAAGGTCTTGCTGATTTTTTTAGTAGCGTGA
ACTTAACATTGGGAAAGACTGTTTTGTCTGGTATATCCAGACCGTCTACA
AAAAACGCTGAAAAATAAGATGAAAATAAAACTAAAAACAAGACCAAAAT
TTGGGGTGAGCCGTAGTTTTTATAAGATACTTCACAAATTGGTCATTTGA
AAGAATAGATATGACGTTTTCCTCAAAAAAAGTAACAAAATTGTTTTATT
ACACGCTAACCCAAATCAAATATAGGTAAAAAACTCATGCCTGTCCTCAA
AATTTACTGCCTCTTATAAAAATATAGAGTGTAGGTACACGTTTATTTAT
AAGAACATCTACAATTTTTGAAACCTTCGGATGTTCTCAACTTCTTTGAG
TTTTAAGCCTAAAAATGTTCTCAACATGTTCTTATTCTGACCATTTTGTG
AATATTTTTGACCATTTTCCTAAGAAATAGGGTGAAGCCTTAAAATGTTC
TTAACATGTTTTTAACATTTCGGCCAGCGAAGCCCTATCTTCTTATATAG
TTTGTTCTTATAAACGAACTTTCTTTATACCGAAACAGGGGTGATCATTT
TGTTCATTGTCATTGGTTGTATATTGGTTCTTCTCGTCATCGTTGGTATA
ATTTGCAAGAAATATTTACGTGGTGATTTTCAAAACAAACGAAAAATCGA
CGATGCTGACGAACCATTACTTGAAGATTGTTATGATGAATTTACTGGCA
AACATGAGGTAATCAATAACACGATGTTTCTTTTATAGGTTACATGTTTT
TTATAAGCATAACGCTTATAAGCATATGAAGGCTCAAATTTGTAGATTTT
CTGAGCATGACATAAGTATTATACGCGAGCCTGAAATTTTTTTCATGCAG
TCAATTTTTTTCTATTCAAAAAGATTTTTTGAAGTGGTCAAGTTGTAAAT
AAAGACTTTACACTGCTCCAAAAATCTTAACGCTTTTTGGATGGAATGTT
AACAAAATTTCTGAGATTTCATGAAAAATCGGGTCGGGTTAAAATTTCAA
ATGGGGATGAAATCAAAGTTGATTTTTAATTTGGTAGTGAAAATGATGAA
ATCTTGGATTTGATTTTCCAGTAGGTTGGGAAACACGGGATCTGTGACAC
AGAGGTGTATAGAAATCAGTATAAGCGTAGTTTAGTCGGTTGTTGGAATC
TTCTAGTGATACAGGGGTGAATAGTGTTGCTTGATGAGACTTAATACCAA
TGCAGAGATTGAAGATTCTTTTGAAAATCAGCTCAGGAATCCACTTTTTA
TGGAAACGTTTTCGCTTCCTTTTTTAGACAAAAAAGAACTTCAGCCAAAC
AAAGGAACTGAATAGCAGTGAAGAAAAAACAGCTGATCAAATCCGTCAGA
AATATCGCAAAGATAAAACTTCACAATCATCGCAAGCATCTTCAAGAAAA
GGATCAGACAGTTCATCCAGGGATGGTGGTAAACATGGAATAGCTACCAG
TTTGCTTGAAAAAGCTGCAGGATTCTCGAACGATAGCTCAGACCGAGAAA
AAGAGTCTCTTGGATCATCGGCATCAGTTGATCGAGTACCAGCCTGGCAA
GCAACCCTTATCCAGGAAGAAAGTGATATACCAGAAACCTCAGATCTAGG
AACTGACTTTTCATCTATTGAGTCACAAAGTCCTTTACCAATACTAGAGC
CACATTCATCACAAACACAAGACACCCAACCACCGCCTCCGTACACCCAA
CACTTACGCCCTGACTCATTATCAAGTACATTTGCCGGTGAAGCTAGCGT
CGTTTTATCATTGAAATATCTATCAACAACCAATGTGATCATCGGAACTA
TAAAGAAGCTTGAGAATGTCAATTTAAATGCTAAAGGAACGCCACGTGAT
ATATCATTTCATTTGAAATTACTTCCAAAAGGAAAACATCGAATGAAAAC
ACCTTGGCGAGCATCTGGCACTGAAAATCTATCTTTAACATTTACAATGG
GTTCTATTAAGATTTCAAGAATGGTTCAAGGTGTACTATGTTTGAGATTA
TATGGAAGATTATTAAGTAGTAGGTTTGCAAGGCCCAAATGTTATGGTGA
ATGTACGATCAACTTAAAGGACATCCTTGGTAAAGATGGTGAAGTTGAAA
TGACATGTCCGTTAACATCTAAAGGACTTTACAAGAGTACAGAAGATCTG
AGATTCTCCACTGACGATGAACTCGAAAATCATTAATCTTCCAAAAATTG
TTATAGAATTGTTTTGTTTTTTATTTGCATATTTTATACTTTGTAAGATA
AGGTCCCAAATAGTAGGGGGGTTCGAATGCTTCAAAAAAACCCTTAATTA
AGGTAATTATAAGCTAAAAACAGATTATTTAGAGCAAGTCAGCTTGTGGT
AGCTAAGAATTTATTCAAAAATAAATAAACAATTGGAGGGGGTCCTGATT
AGAACGGGGAGGGGGTTGGAAAATATTTTTGAAAATTAATAACCGGGTGG
GGACACGTTTATTCTGGACCTTAGAGTAGCCAAACTTTTTTTTTTCGAAA
TAATCTTTCATAAGTTGCTTTTTATATGACCCTGTTAGTTAGTATTTTAC
AGACTAGACAGTTAAGACAACGATTCAAATGTAAATAAGTTATTCAATCA
TTCAAAATGACCAATGAAATTGAAATTGTTAAGTGTCAGGGTATCACTTG
TTTTCTCGTACTATGGTTCTCGAAAGTTAGCAAGTTAGGCTGAGTATCCA
AGCTATAAAATAATATTTTATTTTTTTGATGTTTTTTTTCTATTCATGAT
ATTCATGACGTAATGTTTTCTACGGAAATACTCCGGTTTTAGCCAGTATT
GGTAAAATTAAACTAGATAAAAGTTGTATAAAATTTACCACTACACTGGC
AAAAACCGGGGTCTTTCGTAGAAAACATTACGTCATGAATATCATGAATT
TACAGTTTAATCTACCTCGATATATGTAAACACATGGCATTCCGATTTAA
GATTTTCTCAAAGTTAAAAATCTGCTTTCCGACTGTATTTTAACACACTT
AAAAATCATTTGTGGTGTTTAAAATTTTGCAGAGAAATCCCCTTTGTCTC
AAATATTTCGTCCATGATTGTAC Coding sequence (CDS) from alignment at sc0001348:30366..34238- >TCONS_00035669 ID=TCONS_00035669|Name=TCONS_00035669|organism=Clytia hemisphaerica|type=CDS|length=3285bp|location=Sequence derived from alignment at sc0001348:30366..34238- (Clytia hemisphaerica) ACAAAAAAGAACTTCAGCCAAACAAAGGAACTGAATAGCAGTGAAGAAAA AACAGCTGATCAAATCCGTCAGAAATATCGCAAAGATAAAACTTCACAAT CATCGCAAGCATCTTCAAGAAAAGGATCAGACAGTTCATCCAGGGATGGT GGTAAACATGGAATAGCTACCAGTTTGCTTGAAAAAGCTGCAGGATTCTC GAACGATAGCTCAGACCGAGAAAAAGAGTCTCTTGGATCATCGGCATCAG TTGATCGAGTACCAGCCTGGCAAGCAACCCTTATCCAGGAAGAAAGTGAT ATACCAGAAACCTCAGATCTAGGAACTGACTTTTCATCTATTGAGTCACA AAGTCCTTTACCAATACTAGAGCCACATTCATCACAAACACAAGACACCC AACCACCGCCTCCGTACACCCAACACTTACGCCCTGACTCATTATCAAGT ACATTTGCCGGTGAAGCTAGCGTCGTTTTATCATTGAAATATCTATCAAC AACCAATGTGATCATCGGAACTATAAAGAAGCTTGAGAATGTCAATTTAA ATGCTAAAGGAACGCCACGTGATATATCATTTCATTTGAAATTACTTCCA AAAGGAAAACATCGAATGAAAACACCTTGGCGAGCATCTGGCACTGAAAA TCTATCTTTAACATTTACAATGGGTTCTATTAAGATTTCAAGAATGGTTC AAGGTGTACTATGTTTGAGATTATATGGAAGATTATTAAGTAGTAGGTTT GCAAGGCCCAAATGTTATGGTGAATGTACGATCAACTTAAAGGACATCCT TGGTAAAGATGGTGAAGTTGAAATGACATGTCCGTTAACATCTAAAGGAC TTTACAAGAGTACAGAAGATCTGAGATTCTCCACTGACGATGAACTCGAA AATCATTAAGGGTGATCATTTTGTTCATTGTCATTGGTTGTATATTGGTT CTTCTCGTCATCGTTGGTATAATTTGCAAGAAATATTTACGTGGTGATTT TCAAAACAAACGAAAAATCGACGATGCTGACGAACCATTACTTGAAGATT GTTATGATGAATTTACTGGCAAACATGAGATGGCATTACCACTTGACAAA AAAGAACTTCAGCCAAACAAAGGAACTGAATAGCAGTGAAGAAAAAACAG CTGATCAAATCCGTCAGAAATATCGCAAAGATAAAACTTCACAATCATCG CAAGCATCTTCAAGAAAAGGATCAGACAGTTCATCCAGGGATGGTGGTAA ACATGGAATAGCTACCAGTTTGCTTGAAAAAGCTGCAGGATTCTCGAACG ATAGCTCAGACCGAGAAAAAGAGTCTCTTGGATCATCGGCATCAGTTGAT CGAGTACCAGCCTGGCAAGCAACCCTTATCCAGGAAGAAAGTGATATACC AGAAACCTCAGATCTAGGAACTGACTTTTCATCTATTGAGTCACAAAGTC CTTTACCAATACTAGAGCCACATTCATCACAAACACAAGACACCCAACCA CCGCCTCCGTACACCCAACACTTACGCCCTGACTCATTATCAAGTACATT TGCCGGTGAAGCTAGCGTCGTTTTATCATTGAAATATCTATCAACAACCA ATGTGATCATCGGAACTATAAAGAAGCTTGAGAATGTCAATTTAAATGCT AAAGGAACGCCACGTGATATATCATTTCATTTGAAATTACTTCCAAAAGG AAAACATCGAATGAAAACACCTTGGCGAGCATCTGGCACTGAAAATCTAT CTTTAACATTTACAATGGGTTCTATTAAGATTTCAAGAATGGTTCAAGGT GTACTATGTTTGAGATTATATGGAAGATTATTAAGTAGTAGGTTTGCAAG GCCCAAATGTTATGGTGAATGTACGATCAACTTAAAGGACATCCTTGGTA AAGATGGTGAAGTTGAAATGACATGTCCGTTAACATCTAAAGGACTTTAC AAGAGTACAGAAGATCTGAGATTCTCCACTGACGATGAACTCGAAAATCA TTAAGGGTGATCATTTTGTTCATTGTCATTGGTTGTATATTGGTTCTTCT CGTCATCGTTGGTATAATTTGCAAGAAATATTTACGTGGTGATTTTCAAA ACAAACGAAAAATCGACGATGCTGACGAACCATTACTTGAAGATTGTTAT GATGAATTTACTGGCAAACATGAGATGGCATTACCACTTGACAAAAAAGA ACTTCAGCCAAACAAAGGAACTGAATAGCAGTGAAGAAAAAACAGCTGAT CAAATCCGTCAGAAATATCGCAAAGATAAAACTTCACAATCATCGCAAGC ATCTTCAAGAAAAGGATCAGACAGTTCATCCAGGGATGGTGGTAAACATG GAATAGCTACCAGTTTGCTTGAAAAAGCTGCAGGATTCTCGAACGATAGC TCAGACCGAGAAAAAGAGTCTCTTGGATCATCGGCATCAGTTGATCGAGT ACCAGCCTGGCAAGCAACCCTTATCCAGGAAGAAAGTGATATACCAGAAA CCTCAGATCTAGGAACTGACTTTTCATCTATTGAGTCACAAAGTCCTTTA CCAATACTAGAGCCACATTCATCACAAACACAAGACACCCAACCACCGCC TCCGTACACCCAACACTTACGCCCTGACTCATTATCAAGTACATTTGCCG GTGAAGCTAGCGTCGTTTTATCATTGAAATATCTATCAACAACCAATGTG ATCATCGGAACTATAAAGAAGCTTGAGAATGTCAATTTAAATGCTAAAGG AACGCCACGTGATATATCATTTCATTTGAAATTACTTCCAAAAGGAAAAC ATCGAATGAAAACACCTTGGCGAGCATCTGGCACTGAAAATCTATCTTTA ACATTTACAATGGGTTCTATTAAGATTTCAAGAATGGTTCAAGGTGTACT ATGTTTGAGATTATATGGAAGATTATTAAGTAGTAGGTTTGCAAGGCCCA AATGTTATGGTGAATGTACGATCAACTTAAAGGACATCCTTGGTAAAGAT GGTGAAGTTGAAATGACATGTCCGTTAACATCTAAAGGACTTTACAAGAG TACAGAAGATCTGAGATTCTCCACTGACGATGAACTCGAAAATCATTAAG GGTGATCATTTTGTTCATTGTCATTGGTTGTATATTGGTTCTTCTCGTCA TCGTTGGTATAATTTGCAAGAAATATTTACGTGGTGATTTTCAAAACAAA CGAAAAATCGACGATGCTGACGAACCATTACTTGAAGATTGTTATGATGA ATTTACTGGCAAACATGAGATGGCATTACCACTTG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this transcript:
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
| TCONS_00035669-exon-sc0001348-1575043694:33953..34238 | TCONS_00035669-exon-sc0001348-1575043694:33953..34238 | Clytia hemisphaerica | exon |
| TCONS_00035669-exon-sc0001348-1575043694:32731..32900 | TCONS_00035669-exon-sc0001348-1575043694:32731..32900 | Clytia hemisphaerica | exon |
| TCONS_00035669-exon-sc0001348-1575043694:30366..32161 | TCONS_00035669-exon-sc0001348-1575043694:30366..32161 | Clytia hemisphaerica | exon |
| TCONS_00035669-exon-sc0001348-1510915933:33953..34238 | TCONS_00035669-exon-sc0001348-1510915933:33953..34238 | Clytia hemisphaerica | exon |
| TCONS_00035669-exon-sc0001348-1510915933:32731..32900 | TCONS_00035669-exon-sc0001348-1510915933:32731..32900 | Clytia hemisphaerica | exon |
| TCONS_00035669-exon-sc0001348-1510915933:30366..32161 | TCONS_00035669-exon-sc0001348-1510915933:30366..32161 | Clytia hemisphaerica | exon |
| TCONS_00035669-exon-sc0001348-1491911889:33953..34238 | TCONS_00035669-exon-sc0001348-1491911889:33953..34238 | Clytia hemisphaerica | exon |
| TCONS_00035669-exon-sc0001348-1491911889:32731..32900 | TCONS_00035669-exon-sc0001348-1491911889:32731..32900 | Clytia hemisphaerica | exon |
| TCONS_00035669-exon-sc0001348-1491911889:30366..32161 | TCONS_00035669-exon-sc0001348-1491911889:30366..32161 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
| sc0001348 | supercontig | sc0001348:30366..34238 - |
Blast
The following BLAST results are available for this feature:
|