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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00035656 ID=TCONS_00035656|Name=TCONS_00035656|organism=Clytia hemisphaerica|type=transcript|length=249bp
gaTTTTAGTATAAATAAAATTGTAATCACTGTCAGCTATATTTGGCATCA
GAAAATTCATCATCAAATtcgaattgaaattgaaatccaGACTTTCAAAG
ATATGGCCAATAATTACGCAAGAGGAGCTCCTGCCAATGTTCAAGAAGAG
GAACATCAACAGCCTTTGGCAGCAGACTTGGACAGAGCTAATGACGAATA
TTGGATGAATTTGTGGTCGAACAATAATAGTGAGATTTTTCAATAATAT Run BLAST on NCBI transcript from alignment at sc0001347:23182..24656+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00035656 ID=TCONS_00035656|Name=TCONS_00035656|organism=Clytia hemisphaerica|type=transcript|length=1475bp|location=Sequence derived from alignment at sc0001347:23182..24656+ (Clytia hemisphaerica)
gaTTTTAGTATAAATAAAATTGTAATCACTGTCAGCTATATTTGGCATCA
GAAAATTCATCATCAAATtcgaattgaaattgaaatccaGACTTTCAAAG
ATATGGCCAATAATTACGCAAGAGGTAATATTTCTaatgtttttggacct
accttaagaAGAGGTCCTATACATTAACCTATGCCCGTCCGTTcatccgt
tcgtccgtccgacCGTCTGTTATTAGGTTTTCTGGGGATTTATAAGCTTA
GATCAATGTTCCTAACCAAATAACTCAAGTTTTAGATAATAAATAGTCTC
TTCCTTCCAACCTCCTCCCTTAATTCCACCCAATGGGCACGGgggacaat
caatgatgaaaacacacccccttctcacagacccactgggaaacccttcc
cactgaaaaaattggccaaaataacATCCCctgtggaaaattatcctcca
atttttgtccccattgaagataatcaaataaacttatcctcactgcaaaa
caatttaaatatttttgttatccCCATTGAatcttctgacttgaaaacaa
aagagttGACATCCggccagccataaaaaatataggTATATATCCCCACt
gagttttagtccgttatttttatccccactggctgaaaaaatcctaccgg
gtctgtgtgAAGGGGAATAACTTTAATAAACTGTCACTTTTTATGCTCTG
AATGACTGTAGAAAAATACAGGACTGGTTCtgttttttaaggattttaga
aTAAGAATTTGATCTCCTGCTTTTTTTCTCGTTCATTTGTTCAGGAGCTC
CTGCCAATGTTCAAGAAGAGGAACATCAACAGCCTTTGGCAGCAGGTATT
TTATATTGATTATAAATAAACTCTTTATTCCATGAATAAAATTTTGACCC
CTTAACTCGCATCAGTATTCTAGGATATTCGAATTGCTCAAAAACAGTTT
TATTAATGTAGATGCTTAACTTTTATCACGCATAAGacaatcctaccggg
tctgtgtgAAGGGGTTGTGAACGAACGAAGGATTTAAATAAATCGTCACT
GTTTTTAtattctgaatgattgttttaacGGTCACGCTCACGTATATATC
AATTATATATTGGTTAGATGCATAACCAGGTAGGTCCATAAAAGTATCGC
TTATTAATATTTTTTCGACATTGACTGTTTTGACTATGAAGAGACAAGAC
ATACACGAGAAAGTTATATTCTTATTAGTCAGCCACAAAAGGATTTTATC
CGCTCTTCAAAATGTCAATTTTTAGGCAATCTTATTTTTCTCTGGATTTG
ATTAAGAAAGCAGCAGGAGAAACTTTTCCCTTTAAATGGAGCTGTTCGCC
TTTTTAAATTGCCTATCTGCAAATAATTTTAACAAATATTATGTTTCTTA
GACTTGGACAGAGCTAATGACGAATATTGGATGAATTTGTGGTCGAACAA
TAATAGTGAGATTTTTCAATAATAT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00035656-exon-sc0001347-1491911889:23182..23305 | TCONS_00035656-exon-sc0001347-1491911889:23182..23305 | Clytia hemisphaerica | exon |
| TCONS_00035656-exon-sc0001347-1510915933:23182..23305 | TCONS_00035656-exon-sc0001347-1510915933:23182..23305 | Clytia hemisphaerica | exon |
| TCONS_00035656-exon-sc0001347-1575043694:23182..23305 | TCONS_00035656-exon-sc0001347-1575043694:23182..23305 | Clytia hemisphaerica | exon |
| TCONS_00035656-exon-sc0001347-1491911889:23976..24026 | TCONS_00035656-exon-sc0001347-1491911889:23976..24026 | Clytia hemisphaerica | exon |
| TCONS_00035656-exon-sc0001347-1510915933:23976..24026 | TCONS_00035656-exon-sc0001347-1510915933:23976..24026 | Clytia hemisphaerica | exon |
| TCONS_00035656-exon-sc0001347-1575043694:23976..24026 | TCONS_00035656-exon-sc0001347-1575043694:23976..24026 | Clytia hemisphaerica | exon |
| TCONS_00035656-exon-sc0001347-1491911889:24583..24656 | TCONS_00035656-exon-sc0001347-1491911889:24583..24656 | Clytia hemisphaerica | exon |
| TCONS_00035656-exon-sc0001347-1510915933:24583..24656 | TCONS_00035656-exon-sc0001347-1510915933:24583..24656 | Clytia hemisphaerica | exon |
| TCONS_00035656-exon-sc0001347-1575043694:24583..24656 | TCONS_00035656-exon-sc0001347-1575043694:24583..24656 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0001347 | supercontig | sc0001347:23182..24656 + |
Blast
The following BLAST results are available for this feature:
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