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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00035655 ID=TCONS_00035655|Name=TCONS_00035655|organism=Clytia hemisphaerica|type=transcript|length=377bp
aaacaattGAAAGATTACTCAAATTCAAAGCGATGAAACAACACGAACAC
CCTCACGCCATCCAGGAATATTATGTTGATGGCAgcttaaaaatgagaaa
AATATCGCTTGACTTAAAGACGAAGGGCCCGATGAACCGTCCGTGACAGA
CAGTATTATCGTCAAGCTGTGAAGTAAACAGTGATGGTAGTGTTACCCTA
ATTGTAATTTATCGAAAGTGTACGTAAGGTAAAAAAGCTAAAAGAATAAA
AGTTTATCTggctaaaaaatataaaagccaTGGATCATTTTACAATTAGA
ANCTTGCTCTCATTCGTTTGGTttctgtaataaaaagaaagtcgttattg
tgaacttttAACATGCTTTAAATGGAG Run BLAST on NCBI transcript from alignment at sc0001347:7660..9231+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00035655 ID=TCONS_00035655|Name=TCONS_00035655|organism=Clytia hemisphaerica|type=transcript|length=1572bp|location=Sequence derived from alignment at sc0001347:7660..9231+ (Clytia hemisphaerica)
aaacaattGAAAGATTACTCAAATTCAAAGCGATGAAACAACACGAACAC
CCTCACGCCATCCAGGAATATTATGTTGATGGCAgcttaaaaatgagaaa
gtaAGTGATTATACATCTTGACTTGTTCCACCCACAAACCAAATTCTNTG
GACCAGATTTCTAGATAGAGATAAATACAATATATACAGAGTCCCTCTAA
AAGCACCCCGTGCTCATCACAgtacagccccactggaaaattaactttga
tttaatcttcatttgaaattcaatagatttatatccccattgggatttcg
atagaaatttgtCCTGAATCCCCACTTCCACcgggggctgtgagacaggg
tgctCAAAAGTACATATAACGTAGAAAAAAACTATGAAGTATAGCAAATA
GGCCACAGGGTGAGGTATAAAATTGAATGGGGATTAAACCGATTTCTGGT
TTTGATGGCAGCAACTTTGACAGTCTCAAAGTATAGTGNTTTAAATTTTG
ACTTGGAATTTAATTAGATGGAAAAACTTCCATGGTTTGAGAGATCGCAA
AATATATGTGTCAAGGTTATTTGTGCCTTTTAACTTGACGTTTGTCAGCC
TGTTAAAAAGTAACTATCATTCTCTTTGCTATAACTTCATTACTTTTACT
CCAAGACTGGTAGCTTTTATGTGGCAGGGGTATAttttactgagacaggg
gtatatttAGAATAGAGCCTATTTAGACTAATTGCCCNCCCGGATCTCAT
ATCACGAAActaattgaatttgaaagaagATATGACTCTTGTACCCCCAG
TAAAGATGACGTGCTCATGTCAAATCAATCTGAAACGAATGCATtattaa
aggaaaaaaattacaaaaagattgaggtttccaaaattaattctcgctaa
aattaatcaaaatctttgaaatcaaCTCATCTGAACCCGGCTTTATTTTC
CCATAATACATCGCAACTAAAAAGTAACGCTTTTACACCGTATATCTAAC
TGTACAATCCAACGTTACATTACATGAACGTTGTGGGGTGAAACAACGGG
ATGGTGCCTGTCCTTAAAAAACGCCTTTTCgctacttatttatttaagat
tGCACTCAAATGCATTTAGTCGATCTAGTATTCTCAAAGGTATTTCAATA
TGACACTTTTTACGAGGAAGATGTTTATCGATTACAAAACTTACGTCACA
ACCACGGAGCGCTGACTNTGACTCGGACTTTTTGAGAGAGGGACGTTCCC
CTCGCACAAATGAAACTTGTATAACAACGCTTCCCTTTTTTTCAGAATAT
CGCTTGACTTAAAGACGAAGGGCCCGATGAACCGTCCGTGACAGACAGTA
TTATCGTCAAGCTGTGAAGTAAACAGTGATGGTAGTGTTACCCTAATTGT
AATTTATCGAAAGTGTACGTAAGGTAAAAAAGCTAAAAGAATAAAAGTTT
ATCTggctaaaaaatataaaagccaTGGATCATTTTACAATTAGAANCTT
GCTCTCATTCGTTTGGTttctgtaataaaaagaaagtcgttattgtgaac
ttttAACATGCTTTAAATGGAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00035655-exon-sc0001347-1491911889:7660..7759 | TCONS_00035655-exon-sc0001347-1491911889:7660..7759 | Clytia hemisphaerica | exon |
| TCONS_00035655-exon-sc0001347-1510915933:7660..7759 | TCONS_00035655-exon-sc0001347-1510915933:7660..7759 | Clytia hemisphaerica | exon |
| TCONS_00035655-exon-sc0001347-1575043694:7660..7759 | TCONS_00035655-exon-sc0001347-1575043694:7660..7759 | Clytia hemisphaerica | exon |
| TCONS_00035655-exon-sc0001347-1491911889:8955..9231 | TCONS_00035655-exon-sc0001347-1491911889:8955..9231 | Clytia hemisphaerica | exon |
| TCONS_00035655-exon-sc0001347-1510915933:8955..9231 | TCONS_00035655-exon-sc0001347-1510915933:8955..9231 | Clytia hemisphaerica | exon |
| TCONS_00035655-exon-sc0001347-1575043694:8955..9231 | TCONS_00035655-exon-sc0001347-1575043694:8955..9231 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0001347 | supercontig | sc0001347:7660..9231 + |
Blast
The following BLAST results are available for this feature:
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