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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00035623 ID=TCONS_00035623|Name=TCONS_00035623|organism=Clytia hemisphaerica|type=transcript|length=1022bp
tgcttctggtgaatgtacagcaggagttggtggttctggtgaatgggata
gtggagttgatgattctggtgaatataatgctgatgttgatggatctggt
gaatgcaatggtggggATGGTCATTCTCGTTAATGCAATGGTGGGGATGG
TGGGGACGGcgaatgtgatggtggagttgattattctggtgaatgtgcat
taggagttgatggatctggtgaatgcaatggtggagttaaTGGTTCTGGA
GAATGTGATGGTGAAGTTAATGGTTCTGGTAAATGTACATTAttaattga
agattttgagcttactcttaggttcccaataaacgcccccttgttaattt
tccgaaaattgtCTGACGCTGCATGACCTCTTTGTCATCTTATACGCTTT
TGTCCATTTGACCGAGAATCTTTCCCATCGCCCACTCTAGTGGAAATATT
CCTAAAACAAAGTCCCATTTGATTGACGTCATTTGGCAAAATGGTCAAAC
CATTGAAAAATTGGATGCTGTTTCAATCCCAATCCCAGTGGTAAAACAAA
TAAATTCTCAAATAATGACGAAAAAGCAAAATAAGTTTCTGACCtatcta
gaaaaaaaaaacaatttaacccAACACAGTCGCTTctaaagttttgtatt
tgaatgcACTGTGTTTATTTCTTCCACTGGAGCATAAATTAAGGGGTGTT
CTcaggtgtataattgtaaatgTAATGTGCAAATCATCGAAGCatccttt
ttttttaacttgaagaaaaaatcataaatcatTTAAAAGAATAGAACGAC
TTCTTTGAATAACTATATTTGTTTTCTTCGTATTGGCGTATTTTATGTAT
AAaatggatgaatgaatgaagGAAGGAAAAAACAATAACTCCTGCTGCGC
ATTCACCATAAATAACCAACTCCTGctttacattcaccagaaccaccaac
tccaccattgcattcaccagaaccaccaactcctgctgcgcattcaccaa
aatcaccaactcctgctgcaca Run BLAST on NCBI transcript from alignment at sc0001340:53013..54034 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00035623 ID=TCONS_00035623|Name=TCONS_00035623|organism=Clytia hemisphaerica|type=transcript|length=1022bp|location=Sequence derived from alignment at sc0001340:53013..54034 (Clytia hemisphaerica)
tgtgcagcaggagttggtgattttggtgaatgcgcagcaggagttggtgg
ttctggtgaatgcaatggtggagttggtggttctggtgaatgtaaagCAG
GAGTTGGTTATTTATGGTGAATGCGCAGCAGGAGTTATTGTTTTTTCCTT
CcttcattcattcatccattTTATACATAAAATACGCCAATACGAAGAAA
ACAAATATAGTTATTCAAAGAAGTCGTTCTATTCTTTTAAatgatttatg
attttttcttcaagttaaaaaaaaaggatGCTTCGATGATTTGCACATTA
catttacaattatacacctgAGAACACCCCTTAATTTATGCTCCAGTGGA
AGAAATAAACACAGTgcattcaaatacaaaactttagAAGCGACTGTGTT
gggttaaattgttttttttttctagataGGTCAGAAACTTATTTTGCTTT
TTCGTCATTATTTGAGAATTTATTTGTTTTACCACTGGGATTGGGATTGA
AACAGCATCCAATTTTTCAATGGTTTGACCATTTTGCCAAATGACGTCAA
TCAAATGGGACTTTGTTTTAGGAATATTTCCACTAGAGTGGGCGATGGGA
AAGATTCTCGGTCAAATGGACAAAAGCGTATAAGATGACAAAGAGGTCAT
GCAGCGTCAGacaattttcggaaaattaacaagggggcgtttattgggaa
cctaagagtaagctcaaaatcttcaattaaTAATGTACATTTACCAGAAC
CATTAACTTCACCATCACATTCTCCAGAACCAttaactccaccattgcat
tcaccagatccatcaactcctaatgcacattcaccagaataatcaactcc
accatcacattcgCCGTCCCCACCATCCCCACCATTGCATTAACGAGAAT
GACCATccccaccattgcattcaccagatccatcaacatcagcattatat
tcaccagaatcatcaactccactatcccattcaccagaaccaccaactcc
tgctgtacattcaccagaagca
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00035623-exon-sc0001340-1491911889:53013..54034 | TCONS_00035623-exon-sc0001340-1491911889:53013..54034 | Clytia hemisphaerica | exon |
| TCONS_00035623-exon-sc0001340-1510915933:53013..54034 | TCONS_00035623-exon-sc0001340-1510915933:53013..54034 | Clytia hemisphaerica | exon |
| TCONS_00035623-exon-sc0001340-1575043694:53013..54034 | TCONS_00035623-exon-sc0001340-1575043694:53013..54034 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0001340 | supercontig | sc0001340:53013..54034 . |
Blast
The following BLAST results are available for this feature:
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