TCONS_00035621 (transcript) - C. hemisphaerica

Overview
NameTCONS_00035621
Unique NameTCONS_00035621
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length138

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00035621 ID=TCONS_00035621|Name=TCONS_00035621|organism=Clytia hemisphaerica|type=transcript|length=138bp
TGGACCACTTCTCTTTGTTATCTATATCAATGACCTCCCGGACAACGTCA
TCTCATCTATTTTCCTATTTGCCGATGATACGAAGATAGTCAAAGAGATC
AACTCAATCCAACAGGACATCAATGAACTGGAAAATTG
Run BLAST on NCBI

transcript from alignment at sc0001340:59443..59685-

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00035621 ID=TCONS_00035621|Name=TCONS_00035621|organism=Clytia hemisphaerica|type=transcript|length=243bp|location=Sequence derived from alignment at sc0001340:59443..59685- (Clytia hemisphaerica)
TGGACCACTTCTCTTTGTTATCTATATCAATGACCTCCCGGACAACGTCA
TCTCATCTATTTTCCTATTTGCCGATGATACGAAGATAGTCAAAGAGATC
AACTCANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNTTTGCCGATGATACGAAGATAGTCAAAGAGATCAACTCAATCGAGG
ATTCTTTGACAATCCAACAGGACATCAATGAACTGGAAAATTG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_020862XLOC_020862Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00035621-exon-sc0001340-1575043694:59581..59685TCONS_00035621-exon-sc0001340-1575043694:59581..59685Clytia hemisphaericaexon
TCONS_00035621-exon-sc0001340-1575043694:59443..59475TCONS_00035621-exon-sc0001340-1575043694:59443..59475Clytia hemisphaericaexon
TCONS_00035621-exon-sc0001340-1510915933:59581..59685TCONS_00035621-exon-sc0001340-1510915933:59581..59685Clytia hemisphaericaexon
TCONS_00035621-exon-sc0001340-1510915933:59443..59475TCONS_00035621-exon-sc0001340-1510915933:59443..59475Clytia hemisphaericaexon
TCONS_00035621-exon-sc0001340-1491911889:59581..59685TCONS_00035621-exon-sc0001340-1491911889:59581..59685Clytia hemisphaericaexon
TCONS_00035621-exon-sc0001340-1491911889:59443..59475TCONS_00035621-exon-sc0001340-1491911889:59443..59475Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0001340supercontigsc0001340:59443..59685 -
Expression
No biomaterial libraries express this feature.
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00035621 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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