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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00035579 ID=TCONS_00035579|Name=TCONS_00035579|organism=Clytia hemisphaerica|type=transcript|length=1284bp
GATCCAGAATCTTTTGTCTTCTCCACAGGAGTTTTCTGTTTTGTATATAC
GGTACGGTCCGTTCTTAGGTCCTGAGACCATAAGTTGGGATGCGGGAATT
TTATATTCGCAACCGGCCTTCGCCTTGGCGATGTGGAAGGTCTGTCCGGT
CTTGTACATAAGAATTCCGTGTTCTTGCTGGTTAGACATACTTTCAATTT
TGATGTGTGACCAtcgttttgatgatttttctgtACGTGCGATGAACGTG
TCAAAGTCCGGAATGGGTAAGGTTCCGTTAACATACTTTGGTTCTTCGTA
AGCCTTTTGGTCATACGTCGCGTCTTTTTCTTTTGCCATTATTTCTGCAA
TTTTAGGTATCCAAAACTGAACTTGGTTCTTTGATAGATGATTTTCTTGT
CGATCTATCTTCTTTGGCAAAACGATATAGAATTTTACTATGTATGTGGA
CGAGGGGAGTGTGAATGTTTGTGCCTTGATTTTTCTGGAAGTCCTCAAGT
TCACCTTGAATGGTTTGCTGTCACATTCATATAGTAAATCGTTGGGGTTA
ATCTTGTTTCTGCTGATGTCCGCGTGTATTGTTGGTTTTGTCTGTTTCTT
GGCTTTGAGCTGAGTGGTCATCATCAGATTTCCTTCCAGATAATCATGTT
GTAGCTTCATCTCGTATGGTGTTTGGATCTGTGTTCCAGAGTCGTTCTGG
TGGTGTATGTTGTTAACAGTCGGAATCGCTGAGTCTGGGATGTCTTCCGA
GATTTTGATTCTTTTGGTGACTGTTGTTCCTTTGTCGAGAATGATTTTTG
TGGTGTACATTTTGTTGTGCTTTCTGAATTGGAGTTCTGCAATGGTAATC
AAGTCTGTTCTGCTTCTCTTGATTGAGATAAGTAGGCGAGACGTCTTTGT
TGCGTTTACCATTGTTGTGGGTGTCGGACTGGTTGGTGACATGATCCCAG
ACCAGTAGTAGTTCGGATCGCTGCATTCAATGTCCACGTCTTGTATAGTC
ATTTTCGTGCTTTTGGGTATTACTACCACACGAGGTTCTTTGACTGGGAT
ATGGACTTGTCCGAATGTCAGGATTTCGGTGGTGTTAGAATCGTTTTTTG
AAAGGGTGCACAATTTTACTGGTGTAGCCAAGTCCAAGCTCTCTGCATGG
AGTTGGTGAGGGTAGATGATCTGATAAGCGTTAGATGTTGGCATGAAGGC
GATCATGGCCAGACAGGTTGTCAAGAGGTGCAACATGGCGAATCTGTTTG
GACCTCTGTAGTTGGTGTACGCCAGTTTAGGTGG Run BLAST on NCBI protein sequence of TCONS_00035579-protein >TCONS_00035579-protein ID=TCONS_00035579-protein|Name=TCONS_00035579-protein|organism=Clytia hemisphaerica|type=polypeptide|length=428bp
PPKLAYTNYRGPNRFAMLHLLTTCLAMIAFMPTSNAYQIIYPHQLHAESL
DLATPVKLCTLSKNDSNTTEILTFGQVHIPVKEPRVVVIPKSTKMTIQDV
DIECSDPNYYWSGIMSPTSPTPTTMVNATKTSRLLISIKRSRTDLITIAE
LQFRKHNKMYTTKIILDKGTTVTKRIKISEDIPDSAIPTVNNIHHQNDSG
TQIQTPYEMKLQHDYLEGNLMMTTQLKAKKQTKPTIHADISRNKINPNDL
LYECDSKPFKVNLRTSRKIKAQTFTLPSSTYIVKFYIVLPKKIDRQENHL
SKNQVQFWIPKIAEIMAKEKDATYDQKAYEEPKYVNGTLPIPDFDTFIAR
TEKSSKRWSHIKIESMSNQQEHGILMYKTGQTFHIAKAKAGCEYKIPASQ
LMVSGPKNGPYRIYKTENSCGEDKRFWI Run BLAST on NCBI transcript from alignment at sc0001334:62418..63701 Legend: exonCDS Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00035579 ID=TCONS_00035579|Name=TCONS_00035579|organism=Clytia hemisphaerica|type=transcript|length=1284bp|location=Sequence derived from alignment at sc0001334:62418..63701 (Clytia hemisphaerica)
CCACCTAAACTGGCGTACACCAACTACAGAGGTCCAAACAGATTCGCCAT
GTTGCACCTCTTGACAACCTGTCTGGCCATGATCGCCTTCATGCCAACAT
CTAACGCTTATCAGATCATCTACCCTCACCAACTCCATGCAGAGAGCTTG
GACTTGGCTACACCAGTAAAATTGTGCACCCTTTCAAAAAACGATTCTAA
CACCACCGAAATCCTGACATTCGGACAAGTCCATATCCCAGTCAAAGAAC
CTCGTGTGGTAGTAATACCCAAAAGCACGAAAATGACTATACAAGACGTG
GACATTGAATGCAGCGATCCGAACTACTACTGGTCTGGGATCATGTCACC
AACCAGTCCGACACCCACAACAATGGTAAACGCAACAAAGACGTCTCGCC
TACTTATCTCAATCAAGAGAAGCAGAACAGACTTGATTACCATTGCAGAA
CTCCAATTCAGAAAGCACAACAAAATGTACACCACAAAAATCATTCTCGA
CAAAGGAACAACAGTCACCAAAAGAATCAAAATCTCGGAAGACATCCCAG
ACTCAGCGATTCCGACTGTTAACAACATACACCACCAGAACGACTCTGGA
ACACAGATCCAAACACCATACGAGATGAAGCTACAACATGATTATCTGGA
AGGAAATCTGATGATGACCACTCAGCTCAAAGCCAAGAAACAGACAAAAC
CAACAATACACGCGGACATCAGCAGAAACAAGATTAACCCCAACGATTTA
CTATATGAATGTGACAGCAAACCATTCAAGGTGAACTTGAGGACTTCCAG
AAAAATCAAGGCACAAACATTCACACTCCCCTCGTCCACATACATAGTAA
AATTCTATATCGTTTTGCCAAAGAAGATAGATCGACAAGAAAATCATCTA
TCAAAGAACCAAGTTCAGTTTTGGATACCTAAAATTGCAGAAATAATGGC
AAAAGAAAAAGACGCGACGTATGACCAAAAGGCTTACGAAGAACCAAAGT
ATGTTAACGGAACCTTACCCATTCCGGACTTTGACACGTTCATCGCACGT
acagaaaaatcatcaaaacgaTGGTCACACATCAAAATTGAAAGTATGTC
TAACCAGCAAGAACACGGAATTCTTATGTACAAGACCGGACAGACCTTCC
ACATCGCCAAGGCGAAGGCCGGTTGCGAATATAAAATTCCCGCATCCCAA
CTTATGGTCTCAGGACCTAAGAACGGACCGTACCGTATATACAAAACAGA
AAACTCCTGTGGAGAAGACAAAAGATTCTGGATC Coding sequence (CDS) from alignment at sc0001334:62418..63701 >TCONS_00035579 ID=TCONS_00035579|Name=TCONS_00035579|organism=Clytia hemisphaerica|type=CDS|length=1284bp|location=Sequence derived from alignment at sc0001334:62418..63701 (Clytia hemisphaerica)
CCACCTAAACTGGCGTACACCAACTACAGAGGTCCAAACAGATTCGCCAT
GTTGCACCTCTTGACAACCTGTCTGGCCATGATCGCCTTCATGCCAACAT
CTAACGCTTATCAGATCATCTACCCTCACCAACTCCATGCAGAGAGCTTG
GACTTGGCTACACCAGTAAAATTGTGCACCCTTTCAAAAAACGATTCTAA
CACCACCGAAATCCTGACATTCGGACAAGTCCATATCCCAGTCAAAGAAC
CTCGTGTGGTAGTAATACCCAAAAGCACGAAAATGACTATACAAGACGTG
GACATTGAATGCAGCGATCCGAACTACTACTGGTCTGGGATCATGTCACC
AACCAGTCCGACACCCACAACAATGGTAAACGCAACAAAGACGTCTCGCC
TACTTATCTCAATCAAGAGAAGCAGAACAGACTTGATTACCATTGCAGAA
CTCCAATTCAGAAAGCACAACAAAATGTACACCACAAAAATCATTCTCGA
CAAAGGAACAACAGTCACCAAAAGAATCAAAATCTCGGAAGACATCCCAG
ACTCAGCGATTCCGACTGTTAACAACATACACCACCAGAACGACTCTGGA
ACACAGATCCAAACACCATACGAGATGAAGCTACAACATGATTATCTGGA
AGGAAATCTGATGATGACCACTCAGCTCAAAGCCAAGAAACAGACAAAAC
CAACAATACACGCGGACATCAGCAGAAACAAGATTAACCCCAACGATTTA
CTATATGAATGTGACAGCAAACCATTCAAGGTGAACTTGAGGACTTCCAG
AAAAATCAAGGCACAAACATTCACACTCCCCTCGTCCACATACATAGTAA
AATTCTATATCGTTTTGCCAAAGAAGATAGATCGACAAGAAAATCATCTA
TCAAAGAACCAAGTTCAGTTTTGGATACCTAAAATTGCAGAAATAATGGC
AAAAGAAAAAGACGCGACGTATGACCAAAAGGCTTACGAAGAACCAAAGT
ATGTTAACGGAACCTTACCCATTCCGGACTTTGACACGTTCATCGCACGT
acagaaaaatcatcaaaacgaTGGTCACACATCAAAATTGAAAGTATGTC
TAACCAGCAAGAACACGGAATTCTTATGTACAAGACCGGACAGACCTTCC
ACATCGCCAAGGCGAAGGCCGGTTGCGAATATAAAATTCCCGCATCCCAA
CTTATGGTCTCAGGACCTAAGAACGGACCGTACCGTATATACAAAACAGA
AAACTCCTGTGGAGAAGACAAAAGATTCTGGATC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00035579-exon-sc0001334-1491911889:62418..63701 | TCONS_00035579-exon-sc0001334-1491911889:62418..63701 | Clytia hemisphaerica | exon |
| TCONS_00035579-exon-sc0001334-1510915933:62418..63701 | TCONS_00035579-exon-sc0001334-1510915933:62418..63701 | Clytia hemisphaerica | exon |
| TCONS_00035579-exon-sc0001334-1575043694:62418..63701 | TCONS_00035579-exon-sc0001334-1575043694:62418..63701 | Clytia hemisphaerica | exon |
The following polypeptide feature(s) derives from this transcript:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0001334 | supercontig | sc0001334:62418..63701 . |
Blast
The following BLAST results are available for this feature:
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