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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00035575 ID=TCONS_00035575|Name=TCONS_00035575|organism=Clytia hemisphaerica|type=transcript|length=765bp
ATCTGTTACTGAATGGATGTTGTTCTTGGTCTTCTGTGTCAAAGCGGAAT
CCTCCTTCTTGATTTGGTGGTTCGTCTTCTCTGACATTCTCGTCTTTGAA
GTTGAGTTCTTGTTCACTCTCATCACCCACACTTCTGGATCTGGCTCTTG
TTTCAGGCTTTTTGGCTCGGATAAGCGTATCGGGCAAGGCAAAGCTTTCC
TTTGTTTTCACCGTGGCATGAGGCTTGTCAGCTTTATTTGCCACTTTCTT
CTCCTCATCATTCTTCTGGGATGGTGGTGCATGATCTTGATCTTCGGCTT
CTGAACCTCTACCAGAGCGTTCAGGGACCTCCGAACCTCTACCAGAGCGT
TCAGGGGGCGATGGTGTTCTTCTGGGTTGGGTGTCTGCTCGCTGTTTTTC
TTGTGCCATCCTTTGGATGGTTTCCTCGAGCTTCTTCACCTGCTCTCTCT
GCGCTTGCAGAATATTTTGCTGGGTTTGAAGTTCTCGTTCTTTGTCATTG
ATgaccttttgtttttcttctaaGATCCTGGCTCCTTCGTCTCGGAAGGT
GTTGATTGCTTGTACCACAGGCTTCATGATCTCTGGATCATTAGCTTCTG
TTATGACGGCCAAGTCTAGACATTGGTTCTTTAGTCTGTCGGACCACGTA
TCCTCAATTGCGGGAGATGTGGGTGGGTAACTTGTTTGTGGATCGGCTTT
TTCCAACTGCGATAGCTTCTCCTTGAGTTCCCGGGTCTGTAGGACGTAGT
GTGTGTGAATTGGAG Run BLAST on NCBI protein sequence of TCONS_00035575-protein >TCONS_00035575-protein ID=TCONS_00035575-protein|Name=TCONS_00035575-protein|organism=Clytia hemisphaerica|type=polypeptide|length=254bp
PIHTHYVLQTRELKEKLSQLEKADPQTSYPPTSPAIEDTWSDRLKNQCLD
LAVITEANDPEIMKPVVQAINTFRDEGARILEEKQKVINDKERELQTQQN
ILQAQREQVKKLEETIQRMAQEKQRADTQPRRTPSPPERSGRGSEVPERS
GRGSEAEDQDHAPPSQKNDEEKKVANKADKPHATVKTKESFALPDTLIRA
KKPETRARSRSVGDESEQELNFKDENVREDEPPNQEGGFRFDTEDQEQHP
FSNR Run BLAST on NCBI transcript from alignment at sc0001334:56494..57258 Legend: exonfive_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00035575 ID=TCONS_00035575|Name=TCONS_00035575|organism=Clytia hemisphaerica|type=transcript|length=765bp|location=Sequence derived from alignment at sc0001334:56494..57258 (Clytia hemisphaerica)
CTCCAATTCACACACACTACGTCCTACAGACCCGGGAACTCAAGGAGAAG
CTATCGCAGTTGGAAAAAGCCGATCCACAAACAAGTTACCCACCCACATC
TCCCGCAATTGAGGATACGTGGTCCGACAGACTAAAGAACCAATGTCTAG
ACTTGGCCGTCATAACAGAAGCTAATGATCCAGAGATCATGAAGCCTGTG
GTACAAGCAATCAACACCTTCCGAGACGAAGGAGCCAGGATCttagaaga
aaaacaaaaggtcATCAATGACAAAGAACGAGAACTTCAAACCCAGCAAA
ATATTCTGCAAGCGCAGAGAGAGCAGGTGAAGAAGCTCGAGGAAACCATC
CAAAGGATGGCACAAGAAAAACAGCGAGCAGACACCCAACCCAGAAGAAC
ACCATCGCCCCCTGAACGCTCTGGTAGAGGTTCGGAGGTCCCTGAACGCT
CTGGTAGAGGTTCAGAAGCCGAAGATCAAGATCATGCACCACCATCCCAG
AAGAATGATGAGGAGAAGAAAGTGGCAAATAAAGCTGACAAGCCTCATGC
CACGGTGAAAACAAAGGAAAGCTTTGCCTTGCCCGATACGCTTATCCGAG
CCAAAAAGCCTGAAACAAGAGCCAGATCCAGAAGTGTGGGTGATGAGAGT
GAACAAGAACTCAACTTCAAAGACGAGAATGTCAGAGAAGACGAACCACC
AAATCAAGAAGGAGGATTCCGCTTTGACACAGAAGACCAAGAACAACATC
CATTCAGTAACAGAT Coding sequence (CDS) from alignment at sc0001334:56494..57258 >TCONS_00035575 ID=TCONS_00035575|Name=TCONS_00035575|organism=Clytia hemisphaerica|type=CDS|length=762bp|location=Sequence derived from alignment at sc0001334:56494..57258 (Clytia hemisphaerica)
CCAATTCACACACACTACGTCCTACAGACCCGGGAACTCAAGGAGAAGCT
ATCGCAGTTGGAAAAAGCCGATCCACAAACAAGTTACCCACCCACATCTC
CCGCAATTGAGGATACGTGGTCCGACAGACTAAAGAACCAATGTCTAGAC
TTGGCCGTCATAACAGAAGCTAATGATCCAGAGATCATGAAGCCTGTGGT
ACAAGCAATCAACACCTTCCGAGACGAAGGAGCCAGGATCttagaagaaa
aacaaaaggtcATCAATGACAAAGAACGAGAACTTCAAACCCAGCAAAAT
ATTCTGCAAGCGCAGAGAGAGCAGGTGAAGAAGCTCGAGGAAACCATCCA
AAGGATGGCACAAGAAAAACAGCGAGCAGACACCCAACCCAGAAGAACAC
CATCGCCCCCTGAACGCTCTGGTAGAGGTTCGGAGGTCCCTGAACGCTCT
GGTAGAGGTTCAGAAGCCGAAGATCAAGATCATGCACCACCATCCCAGAA
GAATGATGAGGAGAAGAAAGTGGCAAATAAAGCTGACAAGCCTCATGCCA
CGGTGAAAACAAAGGAAAGCTTTGCCTTGCCCGATACGCTTATCCGAGCC
AAAAAGCCTGAAACAAGAGCCAGATCCAGAAGTGTGGGTGATGAGAGTGA
ACAAGAACTCAACTTCAAAGACGAGAATGTCAGAGAAGACGAACCACCAA
ATCAAGAAGGAGGATTCCGCTTTGACACAGAAGACCAAGAACAACATCCA
TTCAGTAACAGA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this transcript:
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00035575-exon-sc0001334-1491911889:56494..57258 | TCONS_00035575-exon-sc0001334-1491911889:56494..57258 | Clytia hemisphaerica | exon |
| TCONS_00035575-exon-sc0001334-1510915933:56494..57258 | TCONS_00035575-exon-sc0001334-1510915933:56494..57258 | Clytia hemisphaerica | exon |
| TCONS_00035575-exon-sc0001334-1575043694:56494..57258 | TCONS_00035575-exon-sc0001334-1575043694:56494..57258 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0001334 | supercontig | sc0001334:56494..57258 . |
Blast
The following BLAST results are available for this feature:
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