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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00035564 ID=TCONS_00035564|Name=TCONS_00035564|organism=Clytia hemisphaerica|type=transcript|length=597bp
AGGAAAGATAACATAAAGGAGAGCTACCCAGGCAGATACCCGAGttaCGC
ATTGAACGTGTCTTGAAACGGCCGGATAAGAACTATCGTCACGCTGGACA
ACCATACGTTTACGAACAAAGAGAGACGGGCGACAACCAGCACCCTTGTt
ttcgtgggtcaaaattcaGGGCTTATAGACGTCCTTATTTTACCCAGATA
CTATCTCACTTAAAAGAATTTTATATAGAATTTTCTTCAGTTTGCTATGG
TTTTCATCAAAGTATAGCTTGAAATGACTGTGGTTTaacgttcttttgtt
tttttttaactgtgACACTTTTGCGCCTCTAACTTCTTTTGCAGTATGAT
GAATTTTTTCGGAATTTCGTTGAAAAATCCttaatttgtataattttctT
CCAACTTCTTGCCAAATTCGCCTTCTAATTTGTGTGTCCTATTGAACTTT
aagtcgtttgaaaaaatatttgcttTGAGCCCTTAAAAATTCTTTTACAT
AGGAATGGATTGgacagaaaatttattttaattctaatagaccttatcgg
agtttttgatttttctaaaaaagcgatgcattctgggattgtttcgg Run BLAST on NCBI transcript from alignment at sc0001333:29789..31184- Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00035564 ID=TCONS_00035564|Name=TCONS_00035564|organism=Clytia hemisphaerica|type=transcript|length=1396bp|location=Sequence derived from alignment at sc0001333:29789..31184- (Clytia hemisphaerica)
AGGAAAGATAACATAAAGGAGAGCTACCCAGGCAGATACCCGAGGTAAGG
AGTTCAAATTATTGTTTATGTACGAGTATTTTCAAGATAGCAGGAGTAAC
ACATAGCATGCACCCCCTGAGCTTAAGGGAGGGGCTAATCCATTGTTGCT
TGATTTGGGCTGTATTTTTTTAAAAATAAATAGAATGTTTTAACCCCTAG
CTTATAAAAATAAATTTTTTGCCTGCGGCGCAATAAATTTATTGAGAATT
TGCATGCTAAATTTGTTTTGTGAAGGTGGGGGCTAAGTTTTAAAAATTTA
TCTTGGGGTTATTTTCCTTACCTCCTCCCCTGAAAAATGCTGAGCGTTGA
CCCTTCTGCACACTATGTAACATTGACTGACCCCGTGGAACTAAGTATTG
TAAAGATAAGAGTATATGATTCGTTGAGATTGCTCCCCTCTGAAATGTAT
AAAATTCTAAAATGGAAATTTCTCTGGGACAAACTGTATGGATTTTAAAT
ACACTTTATTTATCACTTTTCATACTTTTGTNACAATTCAAATTTTCTAT
CAATTCAGTGGATGTCAAAAAGTGTGTCAAAATCTAGCTAAAAGCATAAC
ACGCACTGCATACAGAGCTATTTAAAGGAGTGCTCATTTCAATAGAAAAC
AATGGTTGTTCTCTTGGGAGAAGTGCCTTCTAGAGGTAGTTGGTCATATA
TTATTTTTACATCGTTGCTTGAATATTGCCTGAAAGAAACTTCTAAATTT
CTACTAACCTTTTTAAGCTTAACCAGTAAAACAATTCATACTGGTTAAAG
CCAAATTCAATTTTAAATTCTGAACCTGCTTTTCATTTTTTAGTTACGCA
TTGAACGTGTCTTGAAACGGCCGGATAAGAACTATCGTCACGCTGGACAA
CCATACGTTTACGAACAAAGAGAGACGGGCGACAACCAGCACCCTTGTTT
TCGTGGGTCAAAATTCAGGGCTTATAGACGTCCTTATTTTACCCAGATAC
TATCTCACTTAAAAGAATTTTATATAGAATTTTCTTCAGTTTGCTATGGT
TTTCATCAAAGTATAGCTTGAAATGACTGTGGTTTAACGTTCTTTTGTTT
TTTTTTAACTGTGACACTTTTGCGCCTCTAACTTCTTTTGCAGTATGATG
AATTTTTTCGGAATTTCGTTGAAAAATCCTTAATTTGTATAATTTTCTTC
CAACTTCTTGCCAAATTCGCCTTCTAATTTGTGTGTCCTATTGAACTTTA
AGTCGTTTGAAAAAATATTTGCTTTGAGCCCTTAAAAATTCTTTTACATA
GGAATGGATTGGACAGAAAATTTATTTTAATTCTAATAGACCTTATCGGA
GTTTTTGATTTTTCTAAAAAAGCGATGCATTCTGGGATTGTTTCGG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00035564-exon-sc0001333-1575043694:31141..31184 | TCONS_00035564-exon-sc0001333-1575043694:31141..31184 | Clytia hemisphaerica | exon |
| TCONS_00035564-exon-sc0001333-1575043694:29789..30341 | TCONS_00035564-exon-sc0001333-1575043694:29789..30341 | Clytia hemisphaerica | exon |
| TCONS_00035564-exon-sc0001333-1510915933:31141..31184 | TCONS_00035564-exon-sc0001333-1510915933:31141..31184 | Clytia hemisphaerica | exon |
| TCONS_00035564-exon-sc0001333-1510915933:29789..30341 | TCONS_00035564-exon-sc0001333-1510915933:29789..30341 | Clytia hemisphaerica | exon |
| TCONS_00035564-exon-sc0001333-1491911889:31141..31184 | TCONS_00035564-exon-sc0001333-1491911889:31141..31184 | Clytia hemisphaerica | exon |
| TCONS_00035564-exon-sc0001333-1491911889:29789..30341 | TCONS_00035564-exon-sc0001333-1491911889:29789..30341 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0001333 | supercontig | sc0001333:29789..31184 - |
Blast
The following BLAST results are available for this feature:
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