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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00035560 ID=TCONS_00035560|Name=TCONS_00035560|organism=Clytia hemisphaerica|type=transcript|length=891bp
TCGGGTTATATATTCAGAAGTTGATTTAAATCTTTTTTGGGGGAAAGTTA
GTCGTCTCGTTTGAAAGAGATTTCGTTTAGCTAAATTACGTGGATGCTGG
TAATCATAGTTTGCTTTATTTTGTTATTCACCATGTTTTCGTTGAGATTC
TCATTTCGCTGAGACAACGAATCTTTCAATCTTGGTCTTATGACGTTTCA
CAGCTTGATCATGTCCCCTGTGAACTTTCAGATGCAattgttatttttta
ctttgatAAGTTTAATCGTGCTCAAACTCGTTTTGAATCGTTAGTTATGA
ACAAAGACCAACATAGGACGCATCGAGGcaaagaataaattttttattcc
aTTTGCTTTATTTTACATTATTTTACATAGTCGCTGCTTTTTTTAACGCT
GACTTGGTTGGTTCAAATTTGTTGAGTTTAGTTGTGGAAAAAATTTAATG
TCATCAACTGTTTGATTTTCGGTGAAAGAGCGGTTATCTCGACAAAACAT
TAGGTCTTTGTATTGGAATCGTTGTATGCTCAATTGTGTTCATTGTACTA
TTGCGTACTTTCGATAGTAATTGACTTTACTTTTAAAGGTCTTTCTCCTC
TTTATCTATTTCGTTTATTTCTGCTGTAATTTTAACTGGGAGATGTTTTT
AAAGTAACTCCTTTTTCTGGAAACTGTGTTGTGGTTTTCTCTATTTGTCT
TTTCCGAGTTATTCAGTTTCTTTTGAATGTGTTGCACCAGAGGATTTTCA
CTGTTCGGTACATTAACAAAAATAATATCACTATTTAAATGTTCAGCTTA
TTTGACATTTGTCCCATTATTCCAGTTTTCCCTGTTGTAGCTGTGCACTC
ACCTAAAATTAAAATAGTTCCATACAAATACCCTTCATGTC Run BLAST on NCBI transcript from alignment at sc0001329:20454..21344 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00035560 ID=TCONS_00035560|Name=TCONS_00035560|organism=Clytia hemisphaerica|type=transcript|length=891bp|location=Sequence derived from alignment at sc0001329:20454..21344 (Clytia hemisphaerica)
GACATGAAGGGTATTTGTATGGAACTATTTTAATTTTAGGTGAGTGCACA
GCTACAACAGGGAAAACTGGAATAATGGGACAAATGTCAAATAAGCTGAA
CATTTAAATAGTGATATTATTTTTGTTAATGTACCGAACAGTGAAAATCC
TCTGGTGCAACACATTCAAAAGAAACTGAATAACTCGGAAAAGACAAATA
GAGAAAACCACAACACAGTTTCCAGAAAAAGGAGTTACTTTAAAAACATC
TCCCAGTTAAAATTACAGCAGAAATAAACGAAATAGATAAAGAGGAGAAA
GACCTTTAAAAGTAAAGTCAATTACTATCGAAAGTACGCAATAGTACAAT
GAACACAATTGAGCATACAACGATTCCAATACAAAGACCTAATGTTTTGT
CGAGATAACCGCTCTTTCACCGAAAATCAAACAGTTGATGACATTAAATT
TTTTCCACAACTAAACTCAACAAATTTGAACCAACCAAGTCAGCGTTAAA
AAAAGCAGCGACTATGTAAAATAATGTAAAATAAAGCAAAtggaataaaa
aatttattctttgCCTCGATGCGTCCTATGTTGGTCTTTGTTCATAACTA
ACGATTCAAAACGAGTTTGAGCACGATTAAACTTatcaaagtaaaaaata
acaatTGCATCTGAAAGTTCACAGGGGACATGATCAAGCTGTGAAACGTC
ATAAGACCAAGATTGAAAGATTCGTTGTCTCAGCGAAATGAGAATCTCAA
CGAAAACATGGTGAATAACAAAATAAAGCAAACTATGATTACCAGCATCC
ACGTAATTTAGCTAAACGAAATCTCTTTCAAACGAGACGACTAACTTTCC
CCCAAAAAAGATTTAAATCAACTTCTGAATATATAACCCGA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00035560-exon-sc0001329-1491911889:20454..21344 | TCONS_00035560-exon-sc0001329-1491911889:20454..21344 | Clytia hemisphaerica | exon |
| TCONS_00035560-exon-sc0001329-1510915933:20454..21344 | TCONS_00035560-exon-sc0001329-1510915933:20454..21344 | Clytia hemisphaerica | exon |
| TCONS_00035560-exon-sc0001329-1575043694:20454..21344 | TCONS_00035560-exon-sc0001329-1575043694:20454..21344 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0001329 | supercontig | sc0001329:20454..21344 . |
Blast
The following BLAST results are available for this feature:
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