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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00035558 ID=TCONS_00035558|Name=TCONS_00035558|organism=Clytia hemisphaerica|type=transcript|length=1027bp
AAAGAACCCTCAAAGTACATTATGAAATCTGGAAAAAACACACAAGTCCA
AGACAAGTATATGTGATGAGAACCGTCAAACGAGATAGATGGTAAGGTTA
AGTTCGTTTCATTGCAAAAACTTAGAATTTTCGGTAACTGAATTAATGCT
TCTTTACTCGAACAATTTTTTATGATCCTTTAAACTAATAACTGCCCTAT
AAACCTTGTAAACAAGCTGTCATGTTTTAAGTTTCTCAAACTGCTACGTT
AGGAAAAAGGGCCAAAATAAGCAAGGATgagaaaaactattgttccaagg
ttacaAAATTAAGTggggatagttttggagtgcGCAATTGTAATCATTGA
ATTtcaagtggggatgaaatcaaagtcaatttctcaggggtggggctgaa
attcaaggatTTCTTTCGCCTCTGGTCGAAATTTTTACGGCTCTGTGATA
CAGGGATGTTTAAAGTTCGCTCAAAGgatgtaaaatttggaaaatctgat
cATATATTGATTGCCTTGAAAATTGTCAAGATTGCTCACAAAAAATGCAc
tgggtccgatttcaaaggcctaacaTCGGGCTGCCGTTTTTATGAATCGA
ATGCCCCCCCCCTGGGCTGCATAACTCGAAATCTTAACTCTATCTAACAA
GTTTGTGTCCCGCCGTGCGTCTTCGAgttttatctggcacccagatagtg
aaattttcatccgacacgctgaagctctggaaggtgagaaaaattttcaa
cacctggaaggtttagattacgaaattttgcaagaccgcgtcaaggattt
tgaaACGGGAGGTATCTcgggtaacccagccctcgttttcggggattggc
gggtccaaccgaaatatttttagcttaACGCACAAGCGCAGTTGAACCcg
aatacacgggtttcgaattaaatctagcgcgagagaaaaaatcaagtaaa
taaaaggagcgataaggggaaatgccttataaaaggttgatagatttcct
ttcttctcttttgaaagccaggtgttc Run BLAST on NCBI transcript from alignment at sc0001329:27513..28539- Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00035558 ID=TCONS_00035558|Name=TCONS_00035558|organism=Clytia hemisphaerica|type=transcript|length=1027bp|location=Sequence derived from alignment at sc0001329:27513..28539- (Clytia hemisphaerica)
AAAGAACCCTCAAAGTACATTATGAAATCTGGAAAAAACACACAAGTCCA
AGACAAGTATATGTGATGAGAACCGTCAAACGAGATAGATGGTAAGGTTA
AGTTCGTTTCATTGCAAAAACTTAGAATTTTCGGTAACTGAATTAATGCT
TCTTTACTCGAACAATTTTTTATGATCCTTTAAACTAATAACTGCCCTAT
AAACCTTGTAAACAAGCTGTCATGTTTTAAGTTTCTCAAACTGCTACGTT
AGGAAAAAGGGCCAAAATAAGCAAGGATGAGAAAAACTATTGTTCCAAGG
TTACAAAATTAAGTGGGGATAGTTTTGGAGTGCGCAATTGTAATCATTGA
ATTTCAAGTGGGGATGAAATCAAAGTCAATTTCTCAGGGGTGGGGCTGAA
ATTCAAGGATTTCTTTCGCCTCTGGTCGAAATTTTTACGGCTCTGTGATA
CAGGGATGTTTAAAGTTCGCTCAAAGGATGTAAAATTTGGAAAATCTGAT
CATATATTGATTGCCTTGAAAATTGTCAAGATTGCTCACAAAAAATGCAC
TGGGTCCGATTTCAAAGGCCTAACATCGGGCTGCCGTTTTTATGAATCGA
ATGCCCCCCCCCTGGGCTGCATAACTCGAAATCTTAACTCTATCTAACAA
GTTTGTGTCCCGCCGTGCGTCTTCGAGTTTTATCTGGCACCCAGATAGTG
AAATTTTCATCCGACACGCTGAAGCTCTGGAAGGTGAGAAAAATTTTCAA
CACCTGGAAGGTTTAGATTACGAAATTTTGCAAGACCGCGTCAAGGATTT
TGAAACGGGAGGTATCTCGGGTAACCCAGCCCTCGTTTTCGGGGATTGGC
GGGTCCAACCGAAATATTTTTAGCTTAACGCACAAGCGCAGTTGAACCCG
AATACACGGGTTTCGAATTAAATCTAGCGCGAGAGAAAAAATCAAGTAAA
TAAAAGGAGCGATAAGGGGAAATGCCTTATAAAAGGTTGATAGATTTCCT
TTCTTCTCTTTTGAAAGCCAGGTGTTC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00035558-exon-sc0001329-1575043694:27513..28539 | TCONS_00035558-exon-sc0001329-1575043694:27513..28539 | Clytia hemisphaerica | exon |
| TCONS_00035558-exon-sc0001329-1510915933:27513..28539 | TCONS_00035558-exon-sc0001329-1510915933:27513..28539 | Clytia hemisphaerica | exon |
| TCONS_00035558-exon-sc0001329-1491911889:27513..28539 | TCONS_00035558-exon-sc0001329-1491911889:27513..28539 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0001329 | supercontig | sc0001329:27513..28539 - |
Blast
The following BLAST results are available for this feature:
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