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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00035511 ID=TCONS_00035511|Name=TCONS_00035511|organism=Clytia hemisphaerica|type=transcript|length=955bp
aaaatacaaggaaaattcGTCTTGACGAcggtataaaaaaaaacaagtgt
aAAGGCAAGTCTCTACTTTCGCGCGCTTCGATCTAACCTCCAAGCAGCTC
TTCGTGCTCCATGCATTCCACGCATGCGCTCTAAAGGGAATGGTTCTGCA
AGAAGACCTGCGAAGGTTCTCGGGTTTTCTTTGATGGACgacactctgaa
atttcagagtactTTTCACGATTAAATCGCGGCATTCGCATAAAATTTAT
CGATTTGCTCGGGCCGTCTTTGGATGCGTGGGCTAAACAAAACCGATTCT
ACTGCAATCGGGGCTTTCTTGTTCCGAaccaaatccaagatggcgcctgA
AATTCACGTTTTGGCTCttggtcaatgttttgatttttttatggattttg
agACTTGTGAAGGAAAATTCAATGTTTCAAATGTTGTTTATTCATTTTAG
TGTAGCTCTGACATACACCCACAGAAATGGCTGCTCATACTTATTGACCT
AAaagctttgaaagactttttgaAAGTTGTATTAATTGTACACTGATTTT
GCTTggatgttttctcatttttgttcaaGATGAAGGTTCAAACACCAACT
AAATTATTACAGGTATGTTCTCTTATGTAATGATTACTTCCCTCTTGCTA
TCTGCTTGATTATTAGGAGGTATGAATTGCATTTTATCAGAATAATTATA
ACTTAACGTGTGCGAAATGTTTGTCAGGCATTCAACcgacaaaaaattga
ttcaaacACCAAGAGGTTGACTAGTTTAGGCTCTAtttgtattgttggat
attTGGATACTCTATTTGGATAGAATATTGGTGAAATTTTATgtttgttg
agcttttttaagcgGTTTCGATGATCAGTTTTTTGTGTTCCATACTTTTT
GCAATCAGATTTCAAAAACCTTTCATGAGAACTGTTTAATAGATTTGGAA
GATAA Run BLAST on NCBI transcript from alignment at sc0001321:167..1121 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00035511 ID=TCONS_00035511|Name=TCONS_00035511|organism=Clytia hemisphaerica|type=transcript|length=955bp|location=Sequence derived from alignment at sc0001321:167..1121 (Clytia hemisphaerica)
TTATCTTCCAAATCTATTAAACAGTTCTCATGAAAGGTTTTTGAAATCTG
ATTGCAAAAAGTATGGAACACAAAAAACTGATCATCGAAACcgcttaaaa
aagctcaacaaacATAAAATTTCACCAATATTCTATCCAAATAGAGTATC
CAaatatccaacaatacaaaTAGAGCCTAAACTAGTCAACCTCTTGGTgt
ttgaatcaattttttgtcgGTTGAATGCCTGACAAACATTTCGCACACGT
TAAGTTATAATTATTCTGATAAAATGCAATTCATACCTCCTAATAATCAA
GCAGATAGCAAGAGGGAAGTAATCATTACATAAGAGAACATACCTGTAAT
AATTTAGTTGGTGTTTGAACCTTCATCttgaacaaaaatgagaaaacatc
cAAGCAAAATCAGTGTACAATTAATACAACTTtcaaaaagtctttcaaag
cttTTAGGTCAATAAGTATGAGCAGCCATTTCTGTGGGTGTATGTCAGAG
CTACACTAAAATGAATAAACAACATTTGAAACATTGAATTTTCCTTCACA
AGTctcaaaatccataaaaaaatcaaaacattgaccaaGAGCCAAAACGT
GAATTTcaggcgccatcttggatttggtTCGGAACAAGAAAGCCCCGATT
GCAGTAGAATCGGTTTTGTTTAGCCCACGCATCCAAAGACGGCCCGAGCA
AATCGATAAATTTTATGCGAATGCCGCGATTTAATCGTGAAAagtactct
gaaatttcagagtgtcGTCCATCAAAGAAAACCCGAGAACCTTCGCAGGT
CTTCTTGCAGAACCATTCCCTTTAGAGCGCATGCGTGGAATGCATGGAGC
ACGAAGAGCTGCTTGGAGGTTAGATCGAAGCGCGCGAAAGTAGAGACTTG
CCTTtacacttgtttttttttataccgTCGTCAAGACgaattttccttgt
atttt
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00035511-exon-sc0001321-1491911889:167..1121 | TCONS_00035511-exon-sc0001321-1491911889:167..1121 | Clytia hemisphaerica | exon |
| TCONS_00035511-exon-sc0001321-1510915933:167..1121 | TCONS_00035511-exon-sc0001321-1510915933:167..1121 | Clytia hemisphaerica | exon |
| TCONS_00035511-exon-sc0001321-1575043694:167..1121 | TCONS_00035511-exon-sc0001321-1575043694:167..1121 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0001321 | supercontig | sc0001321:167..1121 . |
Blast
The following BLAST results are available for this feature:
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