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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00035505 ID=TCONS_00035505|Name=TCONS_00035505|organism=Clytia hemisphaerica|type=transcript|length=1076bp
CACAATTTCCTCTAGTCTTGTCTTATGCCTGTACAAGTCATAAAGTCCAA
GGATTAACACTACAATCTGCAGTAGTAAGCTTTGAATTATTTGCTCAAAA
AGCTTTCAATGAAGGCCAAATGTATGTAAATTTATCCAGAGTGACAAATA
TAAATGGGTTATTTCTGATTGGTGAATACAATAGAAAGCATATCCGTGTT
AACAATGAAGCAGGCATTGAATATGAACGATTAAGGAGAGAAAGTTcttt
gcaaaaagttgaaactttttcacCTGCTTTGACTTCCAGTAAACATTTGC
ACATTTCACTTTTAAACGTCAGATCTTTCAAAAAACATGCCAATGACATA
GTTCATTCAGATACTTTGATCAGCAGTGACTTCATATGCCTTACTGAAAC
TCAACTGTCACCTTCAAGTGAAACAAATGACATTGATCAAtccttgcaaa
atttcaaaattgattacAATAATAATTCAGTCAATAGATTTCAAAACACT
GCATGTTGTGCAAATtcttcaatagaaattttagaaTGCCAAAAAGCAGC
TGGTTATACACAGATAATGTTTAAAAAAGAGACATTTAGTGAGCAACCTA
TTACACTTCTACTCTTGTACAAGCCACCTAACTTTTCAAGAAATACTTTT
CTTGAAGAACTGAGAACACTTTTATATGATGAAGTACAGATTATCCTGGG
AGATTTCAATATCGATGCTTTGGATGCTGCAAATGAAGACCTTGCTGATG
TGCTCTCATCATACAAACTGATAGTGAATGAACCTACTCATTTGGCAGGT
GGTCTTCTTGATCATGTGTATTTGAAAAAGACttacttagataaaaaaga
agtacaatgctttgtaaaagatatatatttttcagacCATGATGGAGTTT
GCTTCACTCTATTGAACAATTCCTAAATATTCAAACATGCATAACCATAT
AGCTTACTTAGCCTGCTTATCTGNGCACATTTCACTTTTAAATGTCAGAT
CTTTCAAAAAACATGTCATTGACATGGTTCATTCAGATAATTTGATCAGC
AGTGACTTGATATGCCTTACTGAAAC Run BLAST on NCBI transcript from alignment at sc0001321:50009..51084+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00035505 ID=TCONS_00035505|Name=TCONS_00035505|organism=Clytia hemisphaerica|type=transcript|length=1076bp|location=Sequence derived from alignment at sc0001321:50009..51084+ (Clytia hemisphaerica)
CACAATTTCCTCTAGTCTTGTCTTATGCCTGTACAAGTCATAAAGTCCAA
GGATTAACACTACAATCTGCAGTAGTAAGCTTTGAATTATTTGCTCAAAA
AGCTTTCAATGAAGGCCAAATGTATGTAAATTTATCCAGAGTGACAAATA
TAAATGGGTTATTTCTGATTGGTGAATACAATAGAAAGCATATCCGTGTT
AACAATGAAGCAGGCATTGAATATGAACGATTAAGGAGAGAAAGTTcttt
gcaaaaagttgaaactttttcacCTGCTTTGACTTCCAGTAAACATTTGC
ACATTTCACTTTTAAACGTCAGATCTTTCAAAAAACATGCCAATGACATA
GTTCATTCAGATACTTTGATCAGCAGTGACTTCATATGCCTTACTGAAAC
TCAACTGTCACCTTCAAGTGAAACAAATGACATTGATCAAtccttgcaaa
atttcaaaattgattacAATAATAATTCAGTCAATAGATTTCAAAACACT
GCATGTTGTGCAAATtcttcaatagaaattttagaaTGCCAAAAAGCAGC
TGGTTATACACAGATAATGTTTAAAAAAGAGACATTTAGTGAGCAACCTA
TTACACTTCTACTCTTGTACAAGCCACCTAACTTTTCAAGAAATACTTTT
CTTGAAGAACTGAGAACACTTTTATATGATGAAGTACAGATTATCCTGGG
AGATTTCAATATCGATGCTTTGGATGCTGCAAATGAAGACCTTGCTGATG
TGCTCTCATCATACAAACTGATAGTGAATGAACCTACTCATTTGGCAGGT
GGTCTTCTTGATCATGTGTATTTGAAAAAGACttacttagataaaaaaga
agtacaatgctttgtaaaagatatatatttttcagacCATGATGGAGTTT
GCTTCACTCTATTGAACAATTCCTAAATATTCAAACATGCATAACCATAT
AGCTTACTTAGCCTGCTTATCTGNGCACATTTCACTTTTAAATGTCAGAT
CTTTCAAAAAACATGTCATTGACATGGTTCATTCAGATAATTTGATCAGC
AGTGACTTGATATGCCTTACTGAAAC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00035505-exon-sc0001321-1491911889:50009..51084 | TCONS_00035505-exon-sc0001321-1491911889:50009..51084 | Clytia hemisphaerica | exon |
| TCONS_00035505-exon-sc0001321-1510915933:50009..51084 | TCONS_00035505-exon-sc0001321-1510915933:50009..51084 | Clytia hemisphaerica | exon |
| TCONS_00035505-exon-sc0001321-1575043694:50009..51084 | TCONS_00035505-exon-sc0001321-1575043694:50009..51084 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0001321 | supercontig | sc0001321:50009..51084 + |
Blast
The following BLAST results are available for this feature:
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