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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00035495 ID=TCONS_00035495|Name=TCONS_00035495|organism=Clytia hemisphaerica|type=transcript|length=894bp
GGACTCGAACAGACACGTTACTTCACTATGGGTTGCGATAACCTATTGGT
CGTCACCGATCACAAGCCCCTTACCAAGCTCCTTGGTGATGTATGCTTGA
CGAGATTCGTAACACACGTCTTTTCAGACTCAAACAGAGAACACTCCCAT
GGTCCTTCAAAATCGCCCATGTACCTGGACGCTTCAACCCAGCATCAGAT
GCGACTTCTCGTCACCCCTCTTCTTCGAATTCAAACGACTACCTCGAAGA
GTCAGACCTCATCGAATCTGCACTGATGGCTTCGATCCAACAGTCTTCAT
CTACCGATTTCTCCTTGTCCTGGGAAAAATTATCGAAAGCTACACAGTTA
GAAATGACTTCACTTCTACAATGTGTACGATCAGGCTTCTTGCAAGACCA
TGCGAACAATCAGTCAGTTAAGCCTTACTGGCAATTTCGTGAAGCCTTGT
ATGAACTTGATGGTGTAATCCTCTACAACGATCGGGTTGTAGTTCCACCA
AGTATGCGTCAACACGTCCTCCAAGTGTTACACTCTGCCCACCAAGGTGT
TTCGTCGATGGAAGCAAGAGCTCGGGAGATTGTCTTCTGGCCGGGTTATA
CAAAGGACATCACAGACACTGGAAATTCTTGTACCGATTGCATCAAAACT
GCCCCATCACAAGCTCAATTGCCGCCTGCTCCACCACAGATTCCGTCTAC
ACCGTTCGAGTCCACTGTGGCTGACTTCTTCGACCTTGATGGCCAACACT
ACCTCGTTGTTGCTGATCGCCTATCCGGATGGCCTGAAGTCTTCAAATGC
AAACCTGGCTCACCCCAATCAGGATCGGCAGGACTCGTATCTTGTCTCAT
CAATTGCTTCTCGTGTTATGGCGTCCCAGTCGAGATATCCAGCG Run BLAST on NCBI protein sequence of TCONS_00035495-protein >TCONS_00035495-protein ID=TCONS_00035495-protein|Name=TCONS_00035495-protein|organism=Clytia hemisphaerica|type=polypeptide|length=267bp
MLDEIRNTRLFRLKQRTLPWSFKIAHVPGRFNPASDATSRHPSSSNSNDY
LEESDLIESALMASIQQSSSTDFSLSWEKLSKATQLEMTSLLQCVRSGFL
QDHANNQSVKPYWQFREALYELDGVILYNDRVVVPPSMRQHVLQVLHSAH
QGVSSMEARAREIVFWPGYTKDITDTGNSCTDCIKTAPSQAQLPPAPPQI
PSTPFESTVADFFDLDGQHYLVVADRLSGWPEVFKCKPGSPQSGSAGLVS
CLINCFSCYGVPVEISS Run BLAST on NCBI transcript from alignment at sc0001318:38808..39701 Legend: exonthree_prime_UTRCDSfive_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00035495 ID=TCONS_00035495|Name=TCONS_00035495|organism=Clytia hemisphaerica|type=transcript|length=894bp|location=Sequence derived from alignment at sc0001318:38808..39701 (Clytia hemisphaerica)
CGCTGGATATCTCGACTGGGACGCCATAACACGAGAAGCAATTGATGAGA
CAAGATACGAGTCCTGCCGATCCTGATTGGGGTGAGCCAGGTTTGCATTT
GAAGACTTCAGGCCATCCGGATAGGCGATCAGCAACAACGAGGTAGTGTT
GGCCATCAAGGTCGAAGAAGTCAGCCACAGTGGACTCGAACGGTGTAGAC
GGAATCTGTGGTGGAGCAGGCGGCAATTGAGCTTGTGATGGGGCAGTTTT
GATGCAATCGGTACAAGAATTTCCAGTGTCTGTGATGTCCTTTGTATAAC
CCGGCCAGAAGACAATCTCCCGAGCTCTTGCTTCCATCGACGAAACACCT
TGGTGGGCAGAGTGTAACACTTGGAGGACGTGTTGACGCATACTTGGTGG
AACTACAACCCGATCGTTGTAGAGGATTACACCATCAAGTTCATACAAGG
CTTCACGAAATTGCCAGTAAGGCTTAACTGACTGATTGTTCGCATGGTCT
TGCAAGAAGCCTGATCGTACACATTGTAGAAGTGAAGTCATTTCTAACTG
TGTAGCTTTCGATAATTTTTCCCAGGACAAGGAGAAATCGGTAGATGAAG
ACTGTTGGATCGAAGCCATCAGTGCAGATTCGATGAGGTCTGACTCTTCG
AGGTAGTCGTTTGAATTCGAAGAAGAGGGGTGACGAGAAGTCGCATCTGA
TGCTGGGTTGAAGCGTCCAGGTACATGGGCGATTTTGAAGGACCATGGGA
GTGTTCTCTGTTTGAGTCTGAAAAGACGTGTGTTACGAATCTCGTCAAGC
ATACATCACCAAGGAGCTTGGTAAGGGGCTTGTGATCGGTGACGACCAAT
AGGTTATCGCAACCCATAGTGAAGTAACGTGTCTGTTCGAGTCC Coding sequence (CDS) from alignment at sc0001318:38808..39701 >TCONS_00035495 ID=TCONS_00035495|Name=TCONS_00035495|organism=Clytia hemisphaerica|type=CDS|length=801bp|location=Sequence derived from alignment at sc0001318:38808..39701 (Clytia hemisphaerica)
GCTGGATATCTCGACTGGGACGCCATAACACGAGAAGCAATTGATGAGAC
AAGATACGAGTCCTGCCGATCCTGATTGGGGTGAGCCAGGTTTGCATTTG
AAGACTTCAGGCCATCCGGATAGGCGATCAGCAACAACGAGGTAGTGTTG
GCCATCAAGGTCGAAGAAGTCAGCCACAGTGGACTCGAACGGTGTAGACG
GAATCTGTGGTGGAGCAGGCGGCAATTGAGCTTGTGATGGGGCAGTTTTG
ATGCAATCGGTACAAGAATTTCCAGTGTCTGTGATGTCCTTTGTATAACC
CGGCCAGAAGACAATCTCCCGAGCTCTTGCTTCCATCGACGAAACACCTT
GGTGGGCAGAGTGTAACACTTGGAGGACGTGTTGACGCATACTTGGTGGA
ACTACAACCCGATCGTTGTAGAGGATTACACCATCAAGTTCATACAAGGC
TTCACGAAATTGCCAGTAAGGCTTAACTGACTGATTGTTCGCATGGTCTT
GCAAGAAGCCTGATCGTACACATTGTAGAAGTGAAGTCATTTCTAACTGT
GTAGCTTTCGATAATTTTTCCCAGGACAAGGAGAAATCGGTAGATGAAGA
CTGTTGGATCGAAGCCATCAGTGCAGATTCGATGAGGTCTGACTCTTCGA
GGTAGTCGTTTGAATTCGAAGAAGAGGGGTGACGAGAAGTCGCATCTGAT
GCTGGGTTGAAGCGTCCAGGTACATGGGCGATTTTGAAGGACCATGGGAG
TGTTCTCTGTTTGAGTCTGAAAAGACGTGTGTTACGAATCTCGTCAAGCA
T
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this transcript:
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00035495-exon-sc0001318-1491911889:38808..39701 | TCONS_00035495-exon-sc0001318-1491911889:38808..39701 | Clytia hemisphaerica | exon |
| TCONS_00035495-exon-sc0001318-1510915933:38808..39701 | TCONS_00035495-exon-sc0001318-1510915933:38808..39701 | Clytia hemisphaerica | exon |
| TCONS_00035495-exon-sc0001318-1575043694:38808..39701 | TCONS_00035495-exon-sc0001318-1575043694:38808..39701 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0001318 | supercontig | sc0001318:38808..39701 . |
Blast
The following BLAST results are available for this feature:
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