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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00035494 ID=TCONS_00035494|Name=TCONS_00035494|organism=Clytia hemisphaerica|type=transcript|length=998bp
TTGCGATCTAACACCGGTCCGTCTGGCACCCTCGACACAGAAAAGCTCCT
CACTGCCGTTCTCCAACTCCGTAACACTCCAGATCCAGATTGTCGTTTGT
CCCCTGCACAGGTTTTGTATGGCAGGCCGCTCCGTGACTCACTTGCATTC
GTTAATCGTCTAGAGAAATTCACTAACCCAAATATTCGCCCGATATGGAG
GGAAGCTTGGCGAGAGAAAGAAGTTGCTCTACGAACTCGTTTCCATCGCA
TATCGGAATCTTTGGCTTCGCATGCCCGACCGCTTCAACCATTACAAAGA
GGTGACAAATGCTATGTGCAGAACCAGACTGGCAACTACCCGAAGAGATG
GGACCGCTCAGGTACGGTTCTTGAGCCGGTGGGTCATGACAGCTACGTCG
TTAAAATTGACGGATCTGGTCGGCTGACTCGACGCAACAGACAATTCCTT
CGCAAGTTCGAACCTGTTTCGCCTCAGATTCCGTCAGCTGTCCTTCGTCA
TCATCTCACACATTCTGCCCCAACTTCACAACCATCCATCACTGAGTCGT
CTTCACCACCAGTGGGAACTCAGCCGTTTCTCTACTCAGCTACGCCGTTG
ACGACACAGATTATACCATCAACTGTCCGTGGCTCCGCAACCGCCGCTCG
TCTCGATGTTCCAAAGCCAGCTCCACCTGCGGAGGTACCAAGAGCAGGGG
AACCGGTTAATGGGACAGTACCGATGATAAAGGACTCTCCTTCACTCAAC
GACGAAGGCTCAACATTGATCCCTTCATTTCTAGAGACACGTACTCCTCG
TTTGAGACGCGCTAAGAAACTTTATGAACCTGAGACCGGAAAATGGGTCT
CTCCTTGAAATTCGTTCAGATACATTGAACTGGAGGGGGATGAAGAGATG
TCGCCCCATTTTATATTCATAGTATATTCTTacgttttcttttcatttag
atTATGTTCATCGTAAAAGATAATAGAAATAAATATACGAGGAGGTTT Run BLAST on NCBI protein sequence of TCONS_00035494-protein >TCONS_00035494-protein ID=TCONS_00035494-protein|Name=TCONS_00035494-protein|organism=Clytia hemisphaerica|type=polypeptide|length=285bp
LRSNTGPSGTLDTEKLLTAVLQLRNTPDPDCRLSPAQVLYGRPLRDSLAF
VNRLEKFTNPNIRPIWREAWREKEVALRTRFHRISESLASHARPLQPLQR
GDKCYVQNQTGNYPKRWDRSGTVLEPVGHDSYVVKIDGSGRLTRRNRQFL
RKFEPVSPQIPSAVLRHHLTHSAPTSQPSITESSSPPVGTQPFLYSATPL
TTQIIPSTVRGSATAARLDVPKPAPPAEVPRAGEPVNGTVPMIKDSPSLN
DEGSTLIPSFLETRTPRLRRAKKLYEPETGKWVSP Run BLAST on NCBI transcript from alignment at sc0001318:37671..38668 Legend: exonthree_prime_UTRCDS Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00035494 ID=TCONS_00035494|Name=TCONS_00035494|organism=Clytia hemisphaerica|type=transcript|length=998bp|location=Sequence derived from alignment at sc0001318:37671..38668 (Clytia hemisphaerica)
AAACCTCCTCGTATATTTATTTCTATTATCTTTTACGATGAACATAatct
aaatgaaaagaaaacgtAAGAATATACTATGAATATAAAATGGGGCGACA
TCTCTTCATCCCCCTCCAGTTCAATGTATCTGAACGAATTTCAAGGAGAG
ACCCATTTTCCGGTCTCAGGTTCATAAAGTTTCTTAGCGCGTCTCAAACG
AGGAGTACGTGTCTCTAGAAATGAAGGGATCAATGTTGAGCCTTCGTCGT
TGAGTGAAGGAGAGTCCTTTATCATCGGTACTGTCCCATTAACCGGTTCC
CCTGCTCTTGGTACCTCCGCAGGTGGAGCTGGCTTTGGAACATCGAGACG
AGCGGCGGTTGCGGAGCCACGGACAGTTGATGGTATAATCTGTGTCGTCA
ACGGCGTAGCTGAGTAGAGAAACGGCTGAGTTCCCACTGGTGGTGAAGAC
GACTCAGTGATGGATGGTTGTGAAGTTGGGGCAGAATGTGTGAGATGATG
ACGAAGGACAGCTGACGGAATCTGAGGCGAAACAGGTTCGAACTTGCGAA
GGAATTGTCTGTTGCGTCGAGTCAGCCGACCAGATCCGTCAATTTTAACG
ACGTAGCTGTCATGACCCACCGGCTCAAGAACCGTACCTGAGCGGTCCCA
TCTCTTCGGGTAGTTGCCAGTCTGGTTCTGCACATAGCATTTGTCACCTC
TTTGTAATGGTTGAAGCGGTCGGGCATGCGAAGCCAAAGATTCCGATATG
CGATGGAAACGAGTTCGTAGAGCAACTTCTTTCTCTCGCCAAGCTTCCCT
CCATATCGGGCGAATATTTGGGTTAGTGAATTTCTCTAGACGATTAACGA
ATGCAAGTGAGTCACGGAGCGGCCTGCCATACAAAACCTGTGCAGGGGAC
AAACGACAATCTGGATCTGGAGTGTTACGGAGTTGGAGAACGGCAGTGAG
GAGCTTTTCTGTGTCGAGGGTGCCAGACGGACCGGTGTTAGATCGCAA Coding sequence (CDS) from alignment at sc0001318:37671..38668 >TCONS_00035494 ID=TCONS_00035494|Name=TCONS_00035494|organism=Clytia hemisphaerica|type=CDS|length=858bp|location=Sequence derived from alignment at sc0001318:37671..38668 (Clytia hemisphaerica)
TCAAGGAGAGACCCATTTTCCGGTCTCAGGTTCATAAAGTTTCTTAGCGC
GTCTCAAACGAGGAGTACGTGTCTCTAGAAATGAAGGGATCAATGTTGAG
CCTTCGTCGTTGAGTGAAGGAGAGTCCTTTATCATCGGTACTGTCCCATT
AACCGGTTCCCCTGCTCTTGGTACCTCCGCAGGTGGAGCTGGCTTTGGAA
CATCGAGACGAGCGGCGGTTGCGGAGCCACGGACAGTTGATGGTATAATC
TGTGTCGTCAACGGCGTAGCTGAGTAGAGAAACGGCTGAGTTCCCACTGG
TGGTGAAGACGACTCAGTGATGGATGGTTGTGAAGTTGGGGCAGAATGTG
TGAGATGATGACGAAGGACAGCTGACGGAATCTGAGGCGAAACAGGTTCG
AACTTGCGAAGGAATTGTCTGTTGCGTCGAGTCAGCCGACCAGATCCGTC
AATTTTAACGACGTAGCTGTCATGACCCACCGGCTCAAGAACCGTACCTG
AGCGGTCCCATCTCTTCGGGTAGTTGCCAGTCTGGTTCTGCACATAGCAT
TTGTCACCTCTTTGTAATGGTTGAAGCGGTCGGGCATGCGAAGCCAAAGA
TTCCGATATGCGATGGAAACGAGTTCGTAGAGCAACTTCTTTCTCTCGCC
AAGCTTCCCTCCATATCGGGCGAATATTTGGGTTAGTGAATTTCTCTAGA
CGATTAACGAATGCAAGTGAGTCACGGAGCGGCCTGCCATACAAAACCTG
TGCAGGGGACAAACGACAATCTGGATCTGGAGTGTTACGGAGTTGGAGAA
CGGCAGTGAGGAGCTTTTCTGTGTCGAGGGTGCCAGACGGACCGGTGTTA
GATCGCAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00035494-exon-sc0001318-1491911889:37671..38668 | TCONS_00035494-exon-sc0001318-1491911889:37671..38668 | Clytia hemisphaerica | exon |
| TCONS_00035494-exon-sc0001318-1510915933:37671..38668 | TCONS_00035494-exon-sc0001318-1510915933:37671..38668 | Clytia hemisphaerica | exon |
| TCONS_00035494-exon-sc0001318-1575043694:37671..38668 | TCONS_00035494-exon-sc0001318-1575043694:37671..38668 | Clytia hemisphaerica | exon |
The following polypeptide feature(s) derives from this transcript:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0001318 | supercontig | sc0001318:37671..38668 . |
Blast
The following BLAST results are available for this feature:
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