TCONS_00035481 (transcript) - C. hemisphaerica

Overview
NameTCONS_00035481
Unique NameTCONS_00035481
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length573

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00035481 ID=TCONS_00035481|Name=TCONS_00035481|organism=Clytia hemisphaerica|type=transcript|length=573bp
ttagaaCTCCAATTCAatacaaaaatgtaaaaaatgttaACATAGTTTGT
AACTGTATGCTGGATGGAATTTCCAAAACTTGGAGAGCATTGTGCTCTTC
TATCATGCAAACAATTAGaCTTTCTTCCGTTTAACTGTGATGCTTGCTCA
AAGATTTTTTGcaaaGATCACGTGTCTTACGAGAAACATCAATGTGGTCC
TGGCCTTTTAAAGGAAAGTGCCAGTGTGTCCACTTTGCAACCAACCAGTG
TCATTGTCTGCTACTGAAAATCCTGATCGAAAAGTCAATGAACACATTGA
AAACGATTGCAAATCGGACTTGGCAAAACATCGAAGATCTGGGAAGTGCA
ATGTCAAGGGTTGTAAGAAAAGAGAGTTGATTCCGGTGAAATGTGATCGA
TGCCAACGGAACTTCTGTCTACGCCATCGCCATGAAGCAGATCATGACTG
TAAACCCGACCACCTAACCAGAACTCATCAAAGCTCTGCTGACAGACAAG
CCGGTCTTGCAGCAGTCAATCGTTTCCAGGCTTCTTATCATTTACCGAGT
AATCCCTCCAACATCTCAAGGTG
Run BLAST on NCBI

transcript from alignment at sc0001316:4394..17133-

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00035481 ID=TCONS_00035481|Name=TCONS_00035481|organism=Clytia hemisphaerica|type=transcript|length=12740bp|location=Sequence derived from alignment at sc0001316:4394..17133- (Clytia hemisphaerica)
TTAGAACTCCAATTCAATACAAAAATGTAAAAAATGTTAACATAGTTTGT
AACTGTATGCTGGATGGAATTTCCAAAACTTGGAGAGCATTGTGCTCTTC
TATCATGCAAACAATTAGGTAACTGATCATACTTAACTTGATTGATAATC
AGTTTTTTAGTTAGTGGTTATTTTTGTAACAATTACTTACTCTAAATCGG
GTCACTAATCGAAAGGGGGTCTGGAATAAGGGGGATTTGGAAAATCTTTC
AAAAGTAATTATCGGTCGATGGAAATGTCCCGAAGAACTTCAAAAAATAA
GTTAGGCGGAGACGTTTATTATTAGAGACCAGAGACTACGAAAATATATT
ACTTAGGTAAGAGAAAGGGGTGAAAGGGGTAGCTAACATCTAAGAATTTG
AGAATTTTGTTTTTCCTTTTTAGACTTTCTTCCGTTTAACTGTGATGCTT
GCTCAAAGATTTTTTGGTAAGTTAAGATTAGCCCTTCGACCTATTGAATA
ATTAACATTTGCTTTGTTAGTAAGTCTGTATTGGATGGTCACAGATCATG
TGTTAGGATCAATGGCCAGTTAAATGAAGAATTTAAGTGTTGGTGTCCAT
CAAGAGGCTCAGTCCTAAGACCTCTGCACAAAGGAGAAACTCCTGCTAAA
GCTTCCTTGAGTGGCAAAAACAAGGAATAAAAGCACAAAATACAATACAC
AAAATGGAATTTTGGCGTATAGTATAATATAAAGGCGTAGGGAGCAATCC
TAAATAGTAAAGTAAATATAAAATAAACCTTTAAACATAAAATTTGCCCT
TAGATAAAAATCAGCTTTTAAAAAGTTTAGGGAGCTACTCCAAGTCCTAA
AATAAAAGGTATTCCTATGAGATATCTTAGTTGTGTGTCAGTTTCCAGCA
AGCTACCTTCTAAAAGCAACCTTCGATGCAAGAACTAAATAATTAAAAGT
ACCTCTGTACCAAAAACAGAGATCCCACTAAACATGTATTTCATGATTTT
TGGGATTTTAGCATTTTTTTATCATTTTCAGCATGTTTTTGGCCAAGTTG
GCATTATGTTTCAGAAAATCTAATCTTCAAAAAAAAGTTTGTTTGTTTTG
GACTGAAATAATTATTTCGAAGTTTGTATAGTTACTTATTGTTACTTAGA
ATCTTCATAATTATGTCATTTGATTTTGTTCATTTTAGAGAATACAAAAT
CAAGTGTTCTTTTCTGTTTCCTCCTTGAAAGTATTGCTTTGTAAGAGGCT
GTGAAAAATATGTAACGAGATTGACAATGATATAATTCTGATTCAGTCTG
GTATAGAAATAGCTGAGACATCAATTTCAGAAGGAAATGAGGAAATGGAG
CTATTGATCAAAGGCCAAAAGTTAGATCGAGCACAAGCTTATCAAAAATC
GATATGGATGTTAAACGAAAAACTGAACTTCAAATATCATTACGAGAGCC
AGAGGCCAAAAGAAAAAGTTTAGTTGAATTGATAACGTATTGATACTATG
TAGTCTTTAGACATTTGTTAATATTGCTTTGTTATACTTTGTATTTGCTT
TTGTTTGCTCTTATTTCTGCTAGGTACTCATATCCCCTTAGAATGTAGTT
ATATTTCTTTAGATCCCAGTTTTATGAAGAATGAAATCACTAGGAGAATC
TTGAACTTGGTTTTTAGGCTGTTGCCGACAGTAATAGGGTTTTCAGTAAT
CTGAACACTACAATAATAGAAATCATTTTCTTCATTTGTATATACTAACG
TTATTTTCATATGTTATCGGATACTTGTACCCTTTGCTGTCCATTTTTCG
AAAAAAAGTTTTTTAAGGTTTTCACCAAGCCCATTTGGTTTTTNTTGGTT
TTTAGGCTGTTGCCGACAGTAATAGGGTTTTCAGTAATCTGAACACTACA
ATAATAGAAATCATTTTCTTCATTTGTATATACTAAACGTTATTTTCATA
TGTTATCGGATACTTGTACCCTTTGCTGTCCATTTTTCGAAAAAAAGTTT
TTTAAGGTTTTCACCAAGCCCATTTGGTTTTCCACACATCCGAGACTTTC
AGTAGCACGTAGCACTTCGGTAGAGATATCATTACAGAAAATTTTGATAG
TCTGTTTCGATAGATTTAGGGAAGATTCAATTATGAATTGCCTTGCCTTG
CCTTGCTTTGATTCATCCGTGAGGTGAAGCATTAACAAAGTCTTCTTTCC
ATTTTATTTTATCTGACGATTGCCATATATTTGTTGAATTGTCAGAAGTT
ATCGCCAAGAGATATCGTAAACACTACGTAACATTTTAGTGTAAATTCCA
TCGAGACGTTTAATTCGCTTGATATTTAGAGACCAGGATACGAATCCGTA
GAAAAGCATTGATTCTACGCTAGCTTTAAATACATTAGCTTTTGTAGATT
TTTTTATGTAGGCTTTCCAAACCTTAGAGATGGAGTGTAGGGCACTCCAA
GCTTGACCGATTCGTACTTCCATGTCGTGGTTGTTGTCAGTGAAGTTCCC
GAGATATTTAAAATCGTTGACCAGTTCAATTTTGGATCCATCAGAGGAAT
TTAAATATGTGTCCGAGAATGGATTGAGATGCATGTATTTTGTTCTTGGT
GCATTCAGAAAGAGACCAACGTCTTGACATGCATTTTCAACAGCTGCTAA
CAACTCCTGAGCAGCAAAAATTTCGTTCTCGATTAAAGTGATATCGTCAG
CGTAATCTAAGTCGGAGAGACGCTCATCTGGATGGCGGCGACTTTGACGA
CATTTTAGTGTGAAATCATGGTTAGAAATAATAGAAGTTCGAAGAACGTA
ATCCAAGACGATGACGAAAAGAAAGGGTTGTGTCTCTGTACATGATTTTA
ATGCCGTTGACGATAGTAACGGTAAGAATCTCAAAGGTTTTTCGAAAATC
GATAAATGAAATGACTGCTTCCTTCTTAAAATTTTTCATTTCTTCGACGA
TTCTTCTGAGAGCGAGTTTTTTCTCTAGTCTTGGGCATCGGAGCCAGGGG
CTTTTCCGTTTTTCATTTGTTGAGCGACTATTTCTTCTTTTGAAAATAAG
TCAGATGGTATTTCATTCCAATCATCAAAAATTTTACTTATAAGATTAGA
AGCAGTCTGATTTTGAGGTTCCGAATTCGAAGGTTTTTAAAGATCCCATG
CTTGTTTTACTGAAGATAATGATGCAGGGTCTTCAAATGATTTCAAGATG
TTATTTATACAAGCATTTCAGATCGGTCGTAAGCGTTCCTAAGGTTGATT
TGAGCTGTTTGAATAGCCCTGGTTGACGCTCTTAGAGTGGCTTTCCGAGC
TTTCGTCTGCAGAGTTTGTCTGAAGAGGACGATCTCTTTTGGGGAGAAGT
TGAGAACGAATTTTGTTGGCAATTTTGACAAACGAAGAGTAAGTTTGTTG
GTTCCTTGGAATTTTATCGAACTGGGTTTTCATAGATTTATCCAGGTGGT
TGGAGAGATTTTAGTCACTAGGTAGATATTACCTTAGTTATTCACATTTT
GAGAAGGAGGACGACGACACTGTTTTTCCATCTTTTACGATAGAGGATGT
AGTCGATTTGAGACAGTGTGCCTGTTGGAGATCTGTATGTCCAGAGTTTC
ACCGAAGGTTTCTGAAAGGATGTGTTTCCAATGATTAAATTGGAAACCAT
TTGTCGGTTGCAATATGTAAAGAAAATCTGTTGTTCCTTTGAAAGTTGTT
GTTGTTGTTCCTTTGAAAGTTGCGATAACAATACGTTCGCTATAATTTTT
TTTACTGATAAAAGAATGGGAAGTAGTTTAGAGTTGATGGCGATACCAAC
ACTGTGGATAGCAGCACCTTGGTCGTCATGTTTGGCAGAAGCAGTGAACA
GTGTGAACGAGCCAATGTTGCGAGTGACGATATCAGGGTCTGTTGGTTTA
TGAAGAAATCTGTGTTCTTTGATACAAATAATGTCCATGGATTGTGAATG
CAAAAGTTTATTGAGTTCAACTATGGACGAGTCGGTTTGCAGTGTTCTTT
AATTTAATGATGCGACTTTGAATATCTTTGAAGGTTTTGAGAGGCCATTT
TTACGATGTCGAACATTAGAGTTTCTCCGCCGATTAAGGTTGAGGATAGT
CTCCTCATTGGTTACATTTGTAACAGGGTCGGATCGTTTTAATGGCTGAG
AATCAAGGGCTTTTTCTAATGGCTATGAATGAAGTGAGCGGCTCGCCACA
CCTGTTCACCTGATACGGTTCACACGTGTTAGGGCGATATGCCTTCCCGT
TATCATCAGGAGATGATCTTCCGCGAAGCCAAGTTGTTTCGGTACCGAAG
CATCTGTCTGTTGATGAACGCCACTGGAAGTACACACTACCCGTAACGAA
TAATTATAAGTCGGGTTATTTTATGGAGAGCTTTCTTCCTCTAGATCGGC
TGTATTTGGTTCCAAAACAAGGGGACCACGTGAAGGCAACTGGCTTCTGC
CATACACAGCAGTCTGAGATGGTGAGTGGCTATGTGGTACGCGTCAACCT
TCCCTGCTTACTTTTGCTCCGCTAACATTACCTCTGGTTCCCTAAGTACA
GGTTGAACTGATGTCGACGAAGTTTATCAGCNCGTTATCATCAGGAGATG
ATCTTCCGCGAAGCCAAGTTGTTTCGGTACCGAAGCATCTGTCTGTTGAT
GAACGCCACTGGAAGTACACACTACCCGTAACGAATAATTATAAGTCGGG
TTATTTTATGGAGAGCTTTCTTCCTCTAGATCGGCTGTATTTGGTTCCAA
AACAAGGGGACCACGTGAAGGCAACTGGCTTCTGCCATACACAGCAGTCT
GAGATGGTGAGTGGCTATGTGGTACGCGTCAACCGTCCCTGCTTACTTTT
GCTCCGCTAACATCACCTCTGGTTCCCGAAGTACAGGTTGAACTGATGTC
GACGAAGTTTATCAGCCGACCCCCATTATGGCTTAAAAGTAGTTATTATT
TAAGGATACATTGAAAAACACTCTTTTATAATCTCTTTTATAATTTAAAG
TAANCAGCCGACCCCCATTATGGCTTAAAAGTAGTTATTATTTAAGGATA
CATTGAAAAACACTCTTTTATAATCTCTTTTATAATTTAAAGTAAATTAT
AAAGAATGTAACGGTATTGGTAAAAGCAGAAATGAGTGCTGGGTATGTGC
GTGCCTTAACACCTTTCAAAGTCTCTGTAAGGGTCGGAAAAGTCAGAAAT
TTTTAAATCAGTCTCTCTAAGGGTCGAAAAAATCACGATTTTTAGGAATT
TTTTTTGAATTTGAGAGAAAAAATTGTAAAAAAGTTTCTCTAAGGGGAGG
ACTTTTTTCAAAAGTGGAAGAAAATTTTTCAAAAAAGTCTCTAAGGGTCA
CCTTTTCAACAAAAATTAGTCTCTCTAAGGGTCGGGTTTTGGAGGTCCGG
TACGCACATACCCAGCATCCCTCAACCCTAGTATCCCCCACCCCCGGGGG
ATTAAAACTTGAAAGCTTTTGAAAATGGCATTTTCTTCAGTACTAGAATC
TGCTAGAATGGCATTTTTTAGCATTTTTTCTTGGGGTTTTTGGCATTTTT
TCATGCACGTTTTTTTTTAAAAGCCAGTGGGATCACTGCAAAAATGAGGT
TTTAGCGCTAAAGGATAAAAAGCCATTTTTGGAAATACATCGGGGGCTTC
TCTCGAGATTAGATCATTAGTTTTTGATTTTTTGCACAATGATTCAAAAT
GACAGAACCCAAAATATGACAGATCCCAATTTTCAAGAAAATTTTGTTAG
TCTAATTTGGGCCTGAAACTGCCTAAAAATAGTGTATTTTGGGCATGTAT
ATGGAATGATGACGTTATTGTTTTTTGTCGTTAATGGATGTGCTATCTGT
GTCTCCTTGGTTTATAAGAACTAAATCGAAGCGAAAAATATCCTTAACCT
TAAAAGTGTTTATAAGATTCAATTGAAGAACAATTACTTTTCAAGTCTTA
AATTTTTCTCACTGACCTCTCTAATTAGCTTGTTTGGAGTATATTTTCAT
AAATTTCCAATCAATTTTTAGAGATTTAGGACAAAATAACGCACATTTTC
CGACAAGAACTAATTTTCATCTAAATACTGTTGTTTTTCGAATGAAATTT
TCACAAGATACTGCTTGAATATTTATTTAATACCAGTAAGAATTTTTTTT
AAATGATCAGGAAGGCATTCGAGGCATTACGGCATTAGAACATCAGCTCT
ACTCATTCAAGCCACGGCTTTCTTATACTATGTATAGAGGGCAAGGTTCT
ATGTAGGTTTTAAAATAAAAAAATTTATCNAACATCAGCTCTACTCATTC
AAGCCACGGCTTTCTTATACTATGTATAGAGGGCAAGGTTCTATGTAGGT
TTTAAAATAAAAAAATTTATCCGTAAAAATCGGATTTTCTTATTTGGGGA
AATAAAAAAACTTACTATTGTCGCCTTTTTTTCTATTTCCTTTTTACGTT
TGCTAGCCTNATTTTTTTTAAATGATCAGGAAGGCATTCGAGGCATTACG
GCATTAGAACATCAGCTCTACTCATTCAAGCCACGGCTTTCTTATACTAT
GTATAGAGGGCAAGGTTCTATGTAGGTTTTAAAATAAAAAAATTTATCTG
TAAAAATCGGATTTTCTTATTTGGGGAAATAAAAAAACTTACTATTGTCG
CCTTTTTTTCTATTTCCTTTTTACGTTTGCTAGCCCTCAGGTAGGTCCAT
TCAGCATGTAGCTTGTTTTGAATTATTTTTCTTAAAATTATAGTGCTCGG
CTTGGTAGAGAAATGTGACAGATCCTTTTGGAAATAATTTCCGGACAAAA
TTTCTAAAAATAAACTTGAGATTACCTTAGTAAGTTGTTTATTAATTTTT
TAGCAAAGATCACGTGTCTTACGAGAAACATCAATGTGGTCCTGGCCTTT
TAAAGGTATGGAGTTTCTATTTTCATCTCAATATGTGGCACTTAAAATAT
ATAAAATGAATTATTATCCGACGCGCGTAAATAGTGATATTTGATTGGCT
TCTTTGTTGTCCAATATTTTCGATAATAATCCGACGCGCGTAAAAAGCGA
CATTTGATTGGCTTCTTGCTGTCCAATACTTTTGAATATATAGCTTCCAT
GGAGGCTACATATTTCAAAAATTGACGTTACGTCACAAAATAGAAATAAG
ACTTTTGAATAAAAAACTATTGGATTCGACTTTGTCCAATAACTGCTTAA
TATCGTCTGAAAATTGTCAAGCACAAAACATGGAATGTACCTGTCAGTAG
CAGATTTTTAAACTATTTGTCATTTCCTTTATTTACTGAAGTCATATAGC
TCTACATATTTTAGAGAGCTAAAGGTGGAAAGGCTGCGAGTGTTGATTAT
TCTCGAGCACTGTTAAAGACTGCAAAGATATACCATGAAACAAAATAGTA
CAGTGTGTCTGAAAAAAAAAGTTAAGCAAAAGTTATTTTAATAAAATACT
TCTCTTACTTGTCATATTGGTAATGACCTAATTACTCAATTTCTTTTTTA
TTACATTTTGGAATCTAAAAATATCTATTGGTTGAACAAAAATATTCCAT
CTTTCTTAATTATTCTGAACTCAATTGAGAGCAGTTTTGAAGATTTTGAT
TAATACAAAATCGGCTTTCGCTTTTTCCGGTCACACTGTATAACACAAGC
TCCTTTCGGAACAAAATTGGAATCGGGAAGTAGAAGGACAGGTTTTGTGA
CAGTGTCTTCATTCTTTAAGGACAGGAAAGTGCCAGTGTGTCCACTTTGC
AACCAACCAGTGTCATTGTCTGCTACTGAAAATCCTGATCGAAAAGTAAG
TCCATCGTTGTCTCTCTATAAAGTGGCACTTTTATATAGTCCGGGAGCCA
AATCCTATCTCTCCTTACTTTTGCTTAACCCAAGATTCTACAGGATAAAC
TATACATTTTTGGAATCCTCGACTATCCTAGTTTTGGAAATGGTCGGTCC
CCAAAGCTAACTCCTGGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTGTGGTT
TTCATTGTCTGTAATCAGGGTCACTGTGGGCAAATCAGGGGGTAAATACA
CCACTTCTTGGTAGTTGTTGCCTGAATTTGGATGTTTTTATTGTATCGTA
GCCTCAAATTTATATACTTTGAGATTGAAACCCGTTATATACCCTTCAGT
CATTTCTTATTACTTTTGTTAACAACCTACACAAAATAATGACGGATTTA
ACTTAAGTTATGGCCAAATTATAACATTTTTTGACGTAATTTTGTAAGGT
GAAATTTTTCTGATGTATTATGCATCAAGGTCTATCATAACACCTAGTTT
GTGTCTCATTAAAAGTTGTTTGGGTAGGTCCCAGACTTAAAAAGGGTCAA
AATTTAGTTAAAATACCCAAATTTTCCNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNTTCCAAAACTAGGATAGTTGAGGATTCCAAAAATGTATAG
TTTATCCTGTAGAATCTTGGGTTAAGCAAAATGCCATTTTTTGGGTTTGG
CTCCCGGACTAATATATGTTTTGTATACTTTTTTTGGTGCACACGGTAGT
ACCAGTGGATATGTTCTTATTTGAATCAGCTTGCCTTTGTGTCTTTTGTT
TTGGTTAATTAAAGAAGTTCCGTGTCTCAAAAGTACCTATTTTATTTGTA
CCCTATCAAGAGAAAGTGACAACGAATATAAGGAGTGACCAAATCTTTTN
TTGTTTTGGTTAATTAAAGAAGTTCCGTGTCTCAAAAGTACCTATTTTAT
TTGTACCCTATCAAGAGAAAGTGACAACGAATATAAGGAGTGTGACCAAA
TCTTTCATCGACAAGCACTGATCTGTTAGTGGGTATCAGCAGCCTCTGTA
GTAACGTGATAACGTGATGTAGCGAGATCTCTCCCGTTTCGGGCACGTCA
CTTTGAAAGTCCTCAACATTTACAACCCTCGCATGAAACGAAGGCTTTCA
GTGGCTTACTAAGAATATTATATGCATATTATATTATATTATTGCATAGG
TAATGTGGTTTTACCTTTCTTCACAGGTCAATGAACACATTGAAAACGAT
TGCAAATCGGACTTGGCAAAACATCGAAGATCTGGGAAGTGCAATGTCAA
GGGTTGTAAGAAAAGAGAGGTATTTTCAGGTTTCTCATCCAAAAATGTCT
ACCCTGTACGTCATTGCCTTCCCCTGAAAATAGTCCATCCAACAGCATTT
AGGTGATGAATTCTTAAAAATCACCAATTCTTAAACCAATTTTTGAGAGT
TGAACGAAAAAGGGAGAAACATTTTCAACTCTCAAAAACTTAACGCCGCT
AGCTTCGATTCTACTGCTGGCTGTTTAAAAGCCAATGCACATTTTAAGCT
GTCAATAATAATCGTATTTCTACCTTTTGCGACGTAACACTACAAGACGA
AAGAATTAATCTCAAAATTAGGATCGCAAACGCTCTTATGGAGTCCGACT
TTATTACAGCTTCCAATTATGGTGAGAAGGTGCGTCTCTGACTACTTACT
TATTCTATATGAATTTATTTTGGACGGTTTTCATTAATTCAAATTCATAG
TTGATTCCGGTGAAATGTGATCGATGCCAACGGAACTTCTGTCTACGCCA
TCGCCATGAAGCAGATCATGACTGTAAACCCGACCACCTAACCAGGTATT
CCTCATTGAATTAGATTCTTTGTTAAATTTTCAAATCTGATAGATTGCGT
GGATGAAGCGAGTGAGTGAGTTGAGTTGTGGCGTTGATTATATTTTTCTG
TGGGTGCGTGTGTAGAAGTATTTTTTTACATGCGTCGAAACATTTTTTGT
AATGGTCATTTCTTTGCGCAGGAGCCAGGTTTTTGGGTGTGTGCGTGGAT
ACTTTGCTTTGCAGACATTTGTAGATGTACTTTCCATATATTTCTACTTA
TTTGTGTATTGCTTGCCTTCCCCCTACGTTGTGAGTGTACACCCTTTTGT
CAGGCTTAAGTTCTTAAAGTATCCAGGCATAGCTTAAGCTTATTATATGC
TTATGAATCATGCTTATGATTCACCCCGAGCCAAGTTTTTAGTGAAATTT
CAGAAATGTTGTAAAAATTTGTTCAGATTTTGGGAGCAGTGGAATGTAGC
TAGCCGTGGAATGTCTTTTTTTACTTGACCTCTACCAAACCTTTCTAAAC
GGATGACAACTTGAAAAATATTCTAGGCTGACATATATGCTTATGTTATG
CGTAGGAATTCTGCAAATCTGAGCCTTCATATGCTTATAAAAAAACATGT
ATGGAGGACGATCGGCTTTCCTTTTGCTGATTTCTTCGAAATGCGAGTTT
CGACTTACGATTCACGCTGTCTTTTTTCGAATGTTTTTTTTCAGTTTTCA
AATGTTTTTGAAACTTTTAAAATGATTTTAGACTACATTTTGCGGTTAGC
AAAAAGGTTTTCGAACCGAAAGGCTCACTTTAAAATTTATTTGAAAGAAT
TTAAGTTCTGTTACAGATGTCAAAGACTGTTAATCCCAAAACCTGGGCAC
GTGGTTCATTACGAAAATGTCAGAGCACACCGTTTAATCAATCCTCGTTA
TATAAAGAAGTTATCATTCTAAAATAATTCCTGCGAATTCCAGGAAGGTT
TCATTCCAATGGGTAACCAAATTCCTAAATTACAGCATTAATCATCACAA
CTGTCCTTCAATGATGCTTGTACAATGANGGAAGGTTTCATTCCAATGGG
TAACCAAATTCCTAAATTACAGCATTAATCATCACAACTGTATAGATAGT
TGATTTTTGTCTAATTTTAGAACTCATCAAAGCTCTGCTGACAGACAAGC
CGGGTAAGAATAGTTATATGCTCAAGCACAGCATTTCCAGGTTCATTAAG
TATGACCAAATCTTGAATATTATACCAAGTTTTCCCTTATTTAGTGCTAA
GATCAACAGGGTACAAGCATGCCCATTATGACACAAATAAGGTCTTAAAT
TGAACAAAAACGGTAAAAAACGTTGTACTACAATTTCATCAAATATTAGT
AAGAAACAATCAAGGTACAAATAGAAGTAACCATTTTAACTGAGCACCTA
GAAAGCAAGGGGAGCTACACCCTAAAATTTTCCATAAAAACGAGGGGGTT
AGAAGTACACCACTTTTGGACTGATGTTCTTGGGGGAGTTGAAACCTCAT
CATTTAACATGGATGCTGAAAACTTCAGCTTTGATGGTTGGCTTGCCTTC
AATTACTCAAATTAAAGCTCGTGAAGCTTATAATTTTTTACATAATTTTT
GCCTGGGGCTAAACCCATGCTGACGCTATGTTTTAAGTTAACCGGCCAGA
TTGGGGTATGGGGTTTTAGACTGAATATTGATTTTCGTTCAAATGAGTAT
CTTAACAAATCCTAATCTCTCCTTATTTTCAGACCGCTTCAATCTATTTT
AGTGCACTGAAATTAATCCTCTAAGTGATGATCTGTTAATACTTTTTATC
GACTTTTGTTTTATATTTAAGTCTTGCAGCAGTCAATCGTTTCCAGGCTT
CTTATCATTTACCGAGTAATCCCTCCAACATCTCAAGGTG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_020744XLOC_020744Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00035481-exon-sc0001316-1575043694:17016..17133TCONS_00035481-exon-sc0001316-1575043694:17016..17133Clytia hemisphaericaexon
TCONS_00035481-exon-sc0001316-1575043694:16668..16710TCONS_00035481-exon-sc0001316-1575043694:16668..16710Clytia hemisphaericaexon
TCONS_00035481-exon-sc0001316-1575043694:10229..10280TCONS_00035481-exon-sc0001316-1575043694:10229..10280Clytia hemisphaericaexon
TCONS_00035481-exon-sc0001316-1575043694:9339..9408TCONS_00035481-exon-sc0001316-1575043694:9339..9408Clytia hemisphaericaexon
TCONS_00035481-exon-sc0001316-1575043694:6815..6907TCONS_00035481-exon-sc0001316-1575043694:6815..6907Clytia hemisphaericaexon
TCONS_00035481-exon-sc0001316-1575043694:6289..6383TCONS_00035481-exon-sc0001316-1575043694:6289..6383Clytia hemisphaericaexon
TCONS_00035481-exon-sc0001316-1575043694:5131..5163TCONS_00035481-exon-sc0001316-1575043694:5131..5163Clytia hemisphaericaexon
TCONS_00035481-exon-sc0001316-1575043694:4394..4462TCONS_00035481-exon-sc0001316-1575043694:4394..4462Clytia hemisphaericaexon
TCONS_00035481-exon-sc0001316-1510915933:17016..17133TCONS_00035481-exon-sc0001316-1510915933:17016..17133Clytia hemisphaericaexon
TCONS_00035481-exon-sc0001316-1510915933:16668..16710TCONS_00035481-exon-sc0001316-1510915933:16668..16710Clytia hemisphaericaexon
TCONS_00035481-exon-sc0001316-1510915933:10229..10280TCONS_00035481-exon-sc0001316-1510915933:10229..10280Clytia hemisphaericaexon
TCONS_00035481-exon-sc0001316-1510915933:9339..9408TCONS_00035481-exon-sc0001316-1510915933:9339..9408Clytia hemisphaericaexon
TCONS_00035481-exon-sc0001316-1510915933:6815..6907TCONS_00035481-exon-sc0001316-1510915933:6815..6907Clytia hemisphaericaexon
TCONS_00035481-exon-sc0001316-1510915933:6289..6383TCONS_00035481-exon-sc0001316-1510915933:6289..6383Clytia hemisphaericaexon
TCONS_00035481-exon-sc0001316-1510915933:5131..5163TCONS_00035481-exon-sc0001316-1510915933:5131..5163Clytia hemisphaericaexon
TCONS_00035481-exon-sc0001316-1510915933:4394..4462TCONS_00035481-exon-sc0001316-1510915933:4394..4462Clytia hemisphaericaexon
TCONS_00035481-exon-sc0001316-1491911889:17016..17133TCONS_00035481-exon-sc0001316-1491911889:17016..17133Clytia hemisphaericaexon
TCONS_00035481-exon-sc0001316-1491911889:16668..16710TCONS_00035481-exon-sc0001316-1491911889:16668..16710Clytia hemisphaericaexon
TCONS_00035481-exon-sc0001316-1491911889:10229..10280TCONS_00035481-exon-sc0001316-1491911889:10229..10280Clytia hemisphaericaexon
TCONS_00035481-exon-sc0001316-1491911889:9339..9408TCONS_00035481-exon-sc0001316-1491911889:9339..9408Clytia hemisphaericaexon
TCONS_00035481-exon-sc0001316-1491911889:6815..6907TCONS_00035481-exon-sc0001316-1491911889:6815..6907Clytia hemisphaericaexon
TCONS_00035481-exon-sc0001316-1491911889:6289..6383TCONS_00035481-exon-sc0001316-1491911889:6289..6383Clytia hemisphaericaexon
TCONS_00035481-exon-sc0001316-1491911889:5131..5163TCONS_00035481-exon-sc0001316-1491911889:5131..5163Clytia hemisphaericaexon
TCONS_00035481-exon-sc0001316-1491911889:4394..4462TCONS_00035481-exon-sc0001316-1491911889:4394..4462Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0001316supercontigsc0001316:4394..17133 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.607764	0.685002	0	0	0.773248	1.70411	0	0	0.562209	0.718322	0	0.358996	0	0.609314	0.719582	0.292778	0.896261	0	0.997113	3.05419	1.00671	1.19923	0	1.25902	2.51609	0	1.11215	2.44817	0	0
Blast
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BLAST of TCONS_00035481 vs. Swiss-Prot (Human)
Match: ZFN2B (AN1-type zinc finger protein 2B OS=Homo sapiens GN=ZFAND2B PE=1 SV=1)

HSP 1 Score: 108.997 bits (271), Expect = 6.855e-40
Identity = 56/118 (47.46%), Postives = 78/118 (66.10%), Query Frame = 2 
Query:  215 KVPVCPLCNQPVSLSATENPDRKVNEHIENDCKSDLAKHRR---SGKCNVKGCKKRELIPVKCDRCQRNFCLRHRHEADHDCKPDHLTRTHQSSADRQAGLAAVNRFQASYHLPSNPS 559
            +VPVCPLCN PV ++  E PDR V EHI+ DC+SD A+ +R   + KC   GC++RE++ + C+RC RNFC++HRH  DHDC  +     H +S   +AGLAA++R QA     + PS
Sbjct:   53 QVPVCPLCNVPVPVARGEPPDRAVGEHIDRDCRSDPAQQKRKIFTNKCERAGCRQREMMKLTCERCSRNFCIKHRHPLDHDCSGE----GHPTS---RAGLAAISRAQAVASTSTVPS 163

HSP 2 Score: 72.4034 bits (176), Expect = 6.855e-40
Identity = 31/51 (60.78%), Postives = 37/51 (72.55%), Query Frame = 1 
Query:   64 MEFPKLGEHCALLSCKQLDFLPFNCDACSKIFCKDHVSYEKHQCGPGLLKE 216
            MEFP LG HC+  SC++LDFLP  CDACS IFC DHV+Y +H CG    K+
Sbjct:    1 MEFPDLGAHCSEPSCQRLDFLPLKCDACSGIFCADHVAYAQHHCGSAYQKD 51
The following BLAST results are available for this feature:
BLAST of TCONS_00035481 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
ZFN2B6.855e-4047.46AN1-type zinc finger protein 2B OS=Homo sapiens GN... [more]
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