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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00035480 ID=TCONS_00035480|Name=TCONS_00035480|organism=Clytia hemisphaerica|type=transcript|length=252bp
attcttataaaaacatgtagttattccttagttttttatttcagtCAGAA
GATCAGGCTTTAGCGTTAGCTTTGAAAGCTTCAATGCACACTGCGCAGCA
AGGCTCTTCAACACAACCACAAGCCCAACCTCCACCGGTGACATCATCAG
AAGATGAAGACGCTGCATTGGCGCGTGCTATCGCTGAATCAGAGCACGAA
GAAAGGAGGCGACAACAACGACAAGAGGTGATAGtgaatttcaaggtttt
tt Run BLAST on NCBI transcript from alignment at sc0001316:1883..3088- Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00035480 ID=TCONS_00035480|Name=TCONS_00035480|organism=Clytia hemisphaerica|type=transcript|length=1206bp|location=Sequence derived from alignment at sc0001316:1883..3088- (Clytia hemisphaerica)
ATTCTTATAAAAACATGTAGTTATTCCTTAGTTTTTTATTTCAGTCAGAA
GATCAGGCTTTAGCGTTAGCTTTGAAAGCTTCAATGCACACTGCGCAGCA
AGGCTCTTCAACACAACCACAAGCCCAACCTCCACCGGTGACATCATCAG
AAGATGAAGACGCTGCATTGGCGCGTGCTATCGCTGAATCAGAGCACGAA
GAAAGGAGGCGACAACAACGACAAGAGGTGTATATTATAACCTCTCTCTC
TCAAAATGACAGGCTATAGGTTAACGTCCAACGGAAAGGATTAAATTTCA
CTGTTCTTAAGTATAACAAACTTGCAGAGTTGGAAAACTCTATTGCGATT
TACACCGAAAAAACGACATACCGTATTACTTCGAATAAACGCCCGGGGCG
TTTATTAAATTTTTTCGATTTTAGAAGGGGCCTTTAAAAGAAGGGGTGTT
TATTAAATTATTTTAGTCTAAAGTCGAATATTTAGAGCAAATATACCCTT
TGGATTAGTTCTTTGTCAGGATTTTAGTGCAAAATTTCTTTGGCTCAACG
ATTAGAATTGCATCGAAAACTGCTCTGGTTACAAGAAATGACTAAAATCT
TCCTTTTCAAACCCAATCAATACTGGTACTAAAGTATTAAAGTCATAAGT
TTCTAATAAACGCCTCTCCCCTAGAGGGGGCGTTCATCCGAAGGGGGCGT
TTATTTGAGGGGGGCGTTTATTAAATAACTTTCCTTTTAGGAGGGGCGTT
TATTCGAGGGGGCGTTTAAAAGAAGGGCGCGTTTATTCGAAGTAATCCGG
TAGTTTAGACTGTGTAAGCCTGTGAGTTAAGCATGTGGGTATGTATTAAT
TTTTAGCATTAGATAGAAAAATTAAGCCCCTGTTATAATTTTTCCAATTT
TGACTTTCTCCTTCATTGTCCAAATTTAGGTATGTAATGCTCAAAGCTAG
CATGTCAAGAACGTGTTTCAGCTGCTGAATCTTTTCAATCTCGATTTCGG
TGAAAAATTGTTGATTGAGGCGAAAAAACAATGTATGGTTTGCTTCGACG
GAGAAAGTTTTTGAGTTTACTAGTCCTAGTTTAGATATTTTTCCTGTTAT
ACTTGATACAATCGGTAGAATGAATAAATAGGTTTCTGTCTATTTTATTT
TTGCAAGCTTCGAATTTTTTTCTTTGATCAGGTGATAGTGAATTTCAAGG
TTTTTT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00035480-exon-sc0001316-1575043694:2862..3088 | TCONS_00035480-exon-sc0001316-1575043694:2862..3088 | Clytia hemisphaerica | exon |
| TCONS_00035480-exon-sc0001316-1575043694:1883..1907 | TCONS_00035480-exon-sc0001316-1575043694:1883..1907 | Clytia hemisphaerica | exon |
| TCONS_00035480-exon-sc0001316-1510915933:2862..3088 | TCONS_00035480-exon-sc0001316-1510915933:2862..3088 | Clytia hemisphaerica | exon |
| TCONS_00035480-exon-sc0001316-1510915933:1883..1907 | TCONS_00035480-exon-sc0001316-1510915933:1883..1907 | Clytia hemisphaerica | exon |
| TCONS_00035480-exon-sc0001316-1491911889:2862..3088 | TCONS_00035480-exon-sc0001316-1491911889:2862..3088 | Clytia hemisphaerica | exon |
| TCONS_00035480-exon-sc0001316-1491911889:1883..1907 | TCONS_00035480-exon-sc0001316-1491911889:1883..1907 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0001316 | supercontig | sc0001316:1883..3088 - |
Blast
The following BLAST results are available for this feature:
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