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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00035464 ID=TCONS_00035464|Name=TCONS_00035464|organism=Clytia hemisphaerica|type=transcript|length=1273bp
AAACCATGAAATGACCCAACTAGATGCCTCCCATCAAATGGAGGCAATCC
AAGAAGTACCATCTGAAGTTGAGGACAATGACCACAACCTGATGCCACTG
AAGAGGGTGATTGATTTACCAGAAGCTCCACAAGTGGATGTGCCATGACC
CTCCCCCCTCGAAATCATTAAACCATCAGCACAAATATTGTTAGATGACA
TTGAAGTTGAAGATGCGCCAAGCTCAGACAGTGACGTTCCAGAACCCCCC
AGGAGATCAAAGAGAGAACGTACACCAACTCTAAGTTTTACCTATGACGA
CTTTGGGCGACCTTCAATAAAGCCAATAAGGAACATGAGAAATTGGCTGA
ACGAATCGAAAGAAGCCCTCTGAATTTTGTTGGGGAGGGAGAAAGGAAAA
ATATAGAGACATAATGTGATTGTTTTCggagaagaatatttttttctgaa
atcggACTGTTAAATATAAATGTTCAAATTTAACGTTAAATTGTCTGGTG
AGCTACAACTGATTATGTATCTGGTAGCAAGAAATCATCACAGTTATTAA
TCGTGTATTTTCTTCGTTTTATGTACCCCTCCATGCGCACCTCGTCTCAA
TCGCAACCAACTCAGCACCAACGGAAATGAAGTCACTTGTCCAGTGGAGT
ACCCCGTCCAGTGGAGTACCCCCTGAAACAGACCTCTTGCTCTTCAGATG
ATCAAAAATGCTGTCAAAGACGATACTTTGGTCGACTGGCTTCCGCCATT
GTGCATCCAACATATACGGTATGTTATTGCATTCGTTCACCCTGGAGTAG
ATTGTTAATCCTCCAGGGCTCAATTGATTCTGTTGTTGATATACGTTCAA
TATGGAGAAGAATGTTGATCTTCCAGCTTCAATTTCGTCGTCACCCTGGA
GTAGATTGCTGATCCTCCAGGGCTCTATGGATTTTCGTTCCAACGTTTTC
GTAAAATGATTTATAAGTTCCTGATGAAAACCAAACGTATTCTTCAAGTA
TTTATTGTTACATCAATGAACTAAATGAACTTTTTGAGATTCCAAATGGA
CTCTCCGCATGATATCTGGCACGCCACCAAGGAGCATTGTTGGGCGAGGG
TGCTAGGGGTGACGATTGGTATTCCGCAAGGGATACTGATCTAAGGACCT
AAGCTGAAGACCATTGTTGGACGAGGGTGTCAGGTGAAGGGTCTCGGTGA
CCTGAAGGACCGGACTGAAGATACGGGTGGACCAGATGTCATAGGCGGTA
ATAGACTAATCAGTCAATCGAGT Run BLAST on NCBI transcript from alignment at sc0001315:39054..41329- Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00035464 ID=TCONS_00035464|Name=TCONS_00035464|organism=Clytia hemisphaerica|type=transcript|length=2276bp|location=Sequence derived from alignment at sc0001315:39054..41329- (Clytia hemisphaerica)
AAACCATGAAATGACCCAACTAGATGCCTCCCATCAAATGGAGGCATGCA
AGAAGAAATACAACCAAATGTACAATCCGAAATTGAAGATCATGAGGAAG
CCGACCAAAACCAAGCCCCCAATGAGATGGAGGCAATCCAAGAAGTACCA
TCTGAAGTTGAGGACAATGACCACAACCTGATGCCACTGAAGAGGGTGAT
TGATTTACCAGAAGCTCCACAAGTGGATTTGCCATGACCCTCCCCCCTCG
AAATCATTAAACCATCAGCACAAATATTGTTAGATAACATTGAAGTTGAA
GATACGCCAAGCTCGGACAGTGACGTTCCAGAACCCCCCAGGAGATCAAA
GAGAGAACGTACACCAGCTCAAAGATTTACCTATGACGACTTTGGGCGAC
CTTCAATAAAGCCAATAAGGAACATGAGAAATTGGCTGAACGAATCGAAA
GAAGCCCTCTGAATTTTGTTGGGGAGGGAGAAAGGAAAAATATAGAGACA
TAATGTGATTGTTTTCGGAGAAGAATATTTTTTTCTGGAATCGGACTGTT
AAATATAAATGTTCAAATTTAACGTTAAATTGTATTGTGAGCTACAACTG
ATTATGTATCTTTTAGCAAGAAATCATCACAGTTATTAATCGTGTATTTT
CTTCGTTTTATGTACCCCTCCATGCGCACCTCGTATCAATCGCAACCAAC
TCAGCACCAACGGAAATGAAGCCACTNAAAAGAATGCAATGACCTACAAA
AGGAGGAAGTACCAGAAAAAGGCAAGAATAAACTTACAACAACAGAAAAG
AAGGACAAGATACAGAATTGAGGTAGAGCTGTCGGATGAAGAAAATGAAG
TAGTGGCATACAGACTCTGGAAAAATCTACTCGACTCCCCTAGCCAGTCT
ACCAACAAACTAAGACAAAACCATGAAGTGACCCAACTAGATGCCTCCCA
TCAAAAGGAGACAATGCAAGAAGAAATACAACCAAATGTACAATACGAAA
TTGAAGATCATGAGGAAGCCGACCAAAACCACGCCCCCAATGAGAGGCAA
TCCAAGAAGTACCATCTGAAGTTGAGGACAATGACCACAACCTGATGCCA
CTGAAGAGGGTGATTGATTTACCAGAAGCTCCACAAGTGGATGTGCCATG
ACCCTCCCCCCTCGAAATCATTAAACCATCAGCACAAATATTGTTAGATG
ACATTGAAGTTGAAGATGCGCCAAGCTCAGACAGTGACGTTCCAGAACCC
CCCAGGAGATCAAAGAGAGAACGTACACCAACTCTAAGTTTTACCTATGA
CGACTTTGGGCGACCTTCAATAAAGCCAATAAGGAACATGAGAAATTGGC
TGAACGAATCGAAAGAAGCCCTCTGAATTTTGTTGGGGAGGGAGAAAGGA
AAAATATAGAGACATAATGTGATTGTTTTCGGAGAAGAATATTTTTTTCT
GAAATCGGACTGTTAAATATAAATGTTCAAATTTAACGTTAAATTGTCTG
GTGAGCTACAACTGATTATGTATCTGGTAGCAAGAAATCATCACAGTTAT
TAATCGTGTATTTTCTTCGTTTTATGTACCCCTCCATGCGCACCTCGTCT
CAATCGCAACCAACTCAGCACCAACGGAAATGAAGTCACTTGTCCAGTGG
AGTACCCCGTCCAGTGGAGTACCCCCTGAAACAGACCTCTTGCTCTTCAG
ATGATCAAAAATGCTGTCAAAGACGATACTTTGGTCGACTGGCTTCCGCC
ATTGTGCATCCAACATATACGGTATGTTATTGCATTCGTTCACCCTGGAG
TAGATTGTTAATCCTCCAGGGCTCAATTGATTCTGTTGTTGATATACGTT
CAATATGGAGAAGAATGTTGATCTTCCAGCTTCAATTTCGTCGTCACCCT
GGAGTAGATTGCTGATCCTCCAGGGCTCTATGGATTTTCGTTCCAACGTT
TTCGTAAAATGATTTATAAGTTCCTGATGAAAACCAAACGTATTCTTCAA
GTATTTATTGTTACATCAATGAACTAAATGAACTTTTTGAGATTCCAAAT
GGACTCTCCGCATGATATCTGGCACGCCACCAAGGAGCATTGTTGGGCGA
GGGTGCTAGGGGTGACGATTGGTATTCCGCAAGGGATACTGATCTAAGGA
CCTAAGCTGAAGACCATTGTTGGACGAGGGTGTCAGGTGAAGGGTCTCGG
TGACCTGAAGGACCGGACTGAAGATACGGGTGGACCAGATGTCATAGGCG
GTAATAGACTAATCAGTCAATCGAGT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00035464-exon-sc0001315-1575043694:41287..41329 | TCONS_00035464-exon-sc0001315-1575043694:41287..41329 | Clytia hemisphaerica | exon |
| TCONS_00035464-exon-sc0001315-1575043694:39054..40283 | TCONS_00035464-exon-sc0001315-1575043694:39054..40283 | Clytia hemisphaerica | exon |
| TCONS_00035464-exon-sc0001315-1510915933:41287..41329 | TCONS_00035464-exon-sc0001315-1510915933:41287..41329 | Clytia hemisphaerica | exon |
| TCONS_00035464-exon-sc0001315-1510915933:39054..40283 | TCONS_00035464-exon-sc0001315-1510915933:39054..40283 | Clytia hemisphaerica | exon |
| TCONS_00035464-exon-sc0001315-1491911889:41287..41329 | TCONS_00035464-exon-sc0001315-1491911889:41287..41329 | Clytia hemisphaerica | exon |
| TCONS_00035464-exon-sc0001315-1491911889:39054..40283 | TCONS_00035464-exon-sc0001315-1491911889:39054..40283 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0001315 | supercontig | sc0001315:39054..41329 - |
Blast
The following BLAST results are available for this feature:
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