TCONS_00035449 (transcript) - C. hemisphaerica

Overview
NameTCONS_00035449
Unique NameTCONS_00035449
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2843

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00035449 ID=TCONS_00035449|Name=TCONS_00035449|organism=Clytia hemisphaerica|type=transcript|length=2843bp
AAAACATGGCTCGTCCTTGCTGGCCTTTCTTGTGCATCACCGCCATTCTG
ATAGCAAACTGTTCTGCAAAAGGTGCTGATCATGAAACAACATTTCACAT
ATCCCCAAACGGCCATAACAATGCTACATGCGGCTCCAAAAACAACAAAT
GTCGGACAATCAATTACGCTTACCTATTGAACCAAATCATTGACGATGCT
AAAATCACATTTGTTTTGGAAGCTTCATCTCATGAGAGTATATCTTACCA
GTTGCATCCTCTTGTCAAAAATAATGGACAACACGATGGTCATTTTAAAT
TTGTTAAAGACTATCCAGACAAACAGAACCCGACCATATATGGAAGCAAG
CGTGCAGTTATCCAAACTGGAGGCGTAATCGATATACAGTTTGACAGTAT
CAATCTCAACGATGTGCTACTTCTGCGTAAAAACATCCCAAGAATCAATA
TATTCATACGAAATGCATCTAtcaatttaaatgaaaaaaaagagttCATA
GCATTACATCAACAGACAGCTAACAGTGTTGTCAACATTGAAATACAATC
TTGTATCTTGAAGTCACCACCTACTGCTAGATGGATGCATATATCAATAC
TAGATCCAAATCCAAAAAACAATATCAAACTATCAAACATAACTATCCAA
GGAGGTAGTTTCTTTATTGAGAACATGGTATCATTTGATCTGGTTGATGC
GGTGATTAAGGATTCTATCCTGCCCTCCAACAATGCTTTCTTTGAGTTAT
CACATGTAAAAAAAGTACTGATCAATAACTTTACAGTACGAAACTTAACA
TCACGGCGTTTAATTTATGTCGGAACAGATTCCTCTATTAACATTAGTAA
TGTAAATATTCTCAGAAGCTCATTTGAGGAAATCATCGACGTACGACAAT
CGACAATCAGTTTTGACAACGTCAATATAACGAacacttttgctgaaaat
tacCTTTTTAACTTTGAGAAAAGTAAAAGTGAAGAATCTAACGGAGTCAA
CATAATTTCATCAAATGCTGCTAAAGGTTTTATTCGTCTACATGAAAGTG
AAGTTAACGTTTTGGACTTCAAAATCACCGATACTGGAAAAGCTAAAATG
AAACATTCCTTCTTTATCTCTGGACGAGACAGCAAACTATATTTCCAGGG
CGAGTTATCTCTGACATCGATGGACTTCACCGGCGACTTATTTGACGTTC
GAGATAATGCTGAACTACATGTTGAGCACTTGCATATGCAGAATATCGTT
TTCAGGGATAGAATTTTATATTCACAACATTCCCCTGCAATTGAGATAAT
ACACTTCGAGCTAATCAATGTGACTGCATCaaagaattttcttcatttgG
AAAACTCTAATATCCATGTGCATCTGATGAATATAAAAAACTCTGACATG
CGAACCCTTTTTGATGCTACGCAATCGGAGATCAAGTTAGAGAAATTCAA
AATGCTCGATTCAAAAATATCCGAAAATGTTTTCAACATGGTTGGAGgta
catttttttccaagatcAAAGTCCACATTTCCAATTCGTCTGTGTCGCGT
TTCATTAGAGCCACAGATGTAATGATAATCATTGAAGATTTCGAAATCGA
AAAATCTCACTTCGAATTAGAAAGTGCACTTTTGGATGAATGCGCATTTA
CCGTGGTTAAAATGAAAGTCGTGAAGACGGATTTTCATTCCGGACCCGTA
CTTGTAACAATGTTTAGTAAAGCTTTATTCGGTGATTTTGAAATGGTTGA
AACAACTGTGGTACATAAGCATGCGTTCCtgttgaaaaaatctaatttca
cgGCAACGAATTTCGTCGTCAGGACAACTAACATAAAACAAAGGAGTTTA
TTTTTCATCGAAGACAGCGTTGCTATAGAATTCAAAGATCTGCAATTGAC
AGGGAATACGTATCGTTCTCAAgtgtttgaaattgaaaatacagAGCAAG
TATATTTCGAAAAGGTTGTGGCATTAGAGAATAAATTCTTTGGTTTTCTA
AAACTCCAAGATGTTAAACCCTTTGTAATTCGAAACTTTGACTTCTTCGA
AAATACAGCTCTTGGTCAAAATGCTTTTGTCGAAGCAATTAACTCTGAAT
CAATCTTCACCGATGGTTCAATCCGTTTTAAAAAGGTTGCTTTGGGAAGC
cattttttctcatttagacAATCACCATCATTGAGTATGTCCAATACAAG
CATTATTTTACCAGATACGAAATCTGTTACAAATTATCAAATTCTGTCTG
TAGAGAATAAAAACAAGAACCGTTCAAGTTTCAAAGACTTTACTGCAACG
TGTGGCGAACACTTTGATATTGTTAAAAATGTCACTCCTTTATCAGCAGC
AGATCACAACAATGAATTGTTGAACATAACATGTATACGATGCCCACATA
ATACTTTTTCGATGGGTACTAGTTCTATAAATATCAAAGATTCAAGCGGT
AACTACAATGAAAGTATATCAAGAACCAAATGCTCGCCTTGTCCTACTGG
ATCAACATGTTATAACAATAAGTTAGTGGCACGTGACAATTTTTATGGAT
TCTACCAAAATGAGACAGAGGATTTTCGATTTGTGGTGTGCCCTAAAGAT
TATTGTTGCTCTAAAGAAAGTCAGAAATGTAATTCTCCAACCACCTGTAA
TTTACACCGAAAAGGAAGATTTTGTGGCAAATGTGAAGAAGGTTATTTCG
TCAGTATTGTCAATAATAAGTGTGTTGAGAATTCAAAATGCACTACTTCT
AATCGTCAATGGTTTCGGACTTTGTTTATTATCACTACACTTATCATAGC
TGTTGTATTAACTGGCCTCAAAGATTTCATGGCTATTTTGAAA
Run BLAST on NCBI

protein sequence of TCONS_00035449-protein

>TCONS_00035449-protein ID=TCONS_00035449-protein|Name=TCONS_00035449-protein|organism=Clytia hemisphaerica|type=polypeptide|length=947bp
NMARPCWPFLCITAILIANCSAKGADHETTFHISPNGHNNATCGSKNNKC
RTINYAYLLNQIIDDAKITFVLEASSHESISYQLHPLVKNNGQHDGHFKF
VKDYPDKQNPTIYGSKRAVIQTGGVIDIQFDSINLNDVLLLRKNIPRINI
FIRNASINLNEKKEFIALHQQTANSVVNIEIQSCILKSPPTARWMHISIL
DPNPKNNIKLSNITIQGGSFFIENMVSFDLVDAVIKDSILPSNNAFFELS
HVKKVLINNFTVRNLTSRRLIYVGTDSSINISNVNILRSSFEEIIDVRQS
TISFDNVNITNTFAENYLFNFEKSKSEESNGVNIISSNAAKGFIRLHESE
VNVLDFKITDTGKAKMKHSFFISGRDSKLYFQGELSLTSMDFTGDLFDVR
DNAELHVEHLHMQNIVFRDRILYSQHSPAIEIIHFELINVTASKNFLHLE
NSNIHVHLMNIKNSDMRTLFDATQSEIKLEKFKMLDSKISENVFNMVGGT
FFSKIKVHISNSSVSRFIRATDVMIIIEDFEIEKSHFELESALLDECAFT
VVKMKVVKTDFHSGPVLVTMFSKALFGDFEMVETTVVHKHAFLLKKSNFT
ATNFVVRTTNIKQRSLFFIEDSVAIEFKDLQLTGNTYRSQVFEIENTEQV
YFEKVVALENKFFGFLKLQDVKPFVIRNFDFFENTALGQNAFVEAINSES
IFTDGSIRFKKVALGSHFFSFRQSPSLSMSNTSIILPDTKSVTNYQILSV
ENKNKNRSSFKDFTATCGEHFDIVKNVTPLSAADHNNELLNITCIRCPHN
TFSMGTSSINIKDSSGNYNESISRTKCSPCPTGSTCYNNKLVARDNFYGF
YQNETEDFRFVVCPKDYCCSKESQKCNSPTTCNLHRKGRFCGKCEEGYFV
SIVNNKCVENSKCTTSNRQWFRTLFIITTLIIAVVLTGLKDFMAILK
Run BLAST on NCBI

transcript from alignment at sc0001313:60207..69967-

Legend: exonfive_prime_UTRCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00035449 ID=TCONS_00035449|Name=TCONS_00035449|organism=Clytia hemisphaerica|type=transcript|length=9761bp|location=Sequence derived from alignment at sc0001313:60207..69967- (Clytia hemisphaerica)
AAAACATGGCTCGTCCTTGCTGGCCTTTCTTGTGCATCACCGCCATTCTG
ATAGCAAACTGTTCTGCAAAAGGTTAGTTACAATCTTTTTCTTTTTTATA
TACATAATATATTTTATAAGACGTATGTATTTCCATTTCATCATGAATAT
TTTTGTGCAATATTCCGATAAAAGTCATCCTAAAAATATTTTTTAAGTGT
TATTAGATTAACATCCAAACCAAACCTATATCGACAAAAATTCGGGCAAA
CTGGGGAGGCAAATTTGGAATATAAATGATTTTGGCGCCCCTATGAAATA
TCAATATCTTTGTAAAGATTACGCGAGCAGAGCGAGCACGAAAATTTTGG
GGTATTTTCTCTCTTTTTGGCCGAAAACTGCCATACACTTTTTTTTAATA
AGAACCAGTAAATTTTTGCTGAGGCTCGGCTGTTCTTATTTTTTTGGCAC
TTTGAGCCTTGAATTGTTCTTATTTTGTTCTTATTTTTTTGGCACTTTGA
GCCTTGAATTGTTCTTATTTTGTTCTTATTTTTTCTAAGGTAAAAAACAA
GTTTTGGCTATTTACACTTTACTATTTAGAGGATTTTAGAAACCAGTGAT
TCTTTTTTCTATAACTTCAGCCTCTCCACTGTTCTTAAATTGTTCTTATT
TTTTGGCATTTTTGAGCCTCATTGTTCTTATAAAATTGTTCTTATAAAAA
AAGTGTATCTAAGGTGTAAAAGAGCAAAGGGGCGCCGTAAATTAGTAATC
AGAGGCGTCTTTTTACGCCCTTTGTATTTTGGCACCCTTCAAAAAAATTG
GCCGCTGGGGGTGGCACTCCACGCTACTGTTGACACGTAATGCTTATCCC
AAGCAAATATAAGGTGTTATTCTGAAAGTCTTGAGATACGTTGAGGGATA
ATTGATCATTTATATGTAAAAAATGCCTCAAAATGCTCCAAAATTGGCCT
TCTTAAGGTTAAGGTGCCAAATTTTAAGATGGTGATATTCTTTATATTTT
CTTAAATTTTTGGGGCCAATTTATATTAATGAATATTCTTATAGTGTATA
TTCTTATAAAGAAATGATCGGTTTATTTGGCCAACTTTTCCAGTGGGAAG
GGGTCTCAGTGGGTCTGTGAGAAGGGGGTGTCTTATTTCCAACGCAACGT
TTTCTGCAAATCATTCATTATCAGTTCATATACCTTATTACACGAATATT
ACTAGTCATTTTATTACCACAAATTAAAAAAATTCGTGTAAATAAAAACC
CCCTTAATTAAAACCAGCCATGGTGTCCTTGAAAAGCAAATAAAACTTAC
GTTAATTTTTGGAGTGTTAATTTCATGGCCGTTGAATACTTGCCTAGTAA
TATTCGTGTAATAAGGTAGCCTCACTGATTATGCCAACGGCCAATATAAA
CTGATATTATCCCGTAACAATAATCGCGTACTATCCTATAACACCCGTAT
TACTGTATCACTGTATCTTATCGGGGGAAAAAATGTCGAAAATTTTGAGG
GGGTGACGAATTTTTCCCCAACGAAATATTTCCCCGACATTCTATTATCC
GACCAAGACTTTTACCCGATTTTTTATCCCCGACCAGAACATTTACCCGA
AATTTTATACCGCAACCAAAATTCAAATCTAATTTATTTACCCCTTAATT
TACCGAAATTAGTGCTTTAAATGTCGAATTACAAGATCCATTTTCGAGCT
AGTGAAGGAAACCATTTCTTTCGGACAATTTAGTCGGGTGAAAGTGACGA
ATTTGAAATTTTGGTCGGGGAAAAGTGACGAAAATACCTCTAGGTGACGA
AATTTTTACCCGACTAAATAAAACTCTGACATTTTTTCCCCGATAAGGTA
TTATATGGGTTATCAACGACTTCAGTCTGCCTATTGATGTTTCCCCTTAT
GAACAATTTTTGACATAAGACAAAAGTTATATCACTTTGGAAAAGAAAAA
ATAGAAAAGTGTTTCTTATCTTATTTTATTAATTTTATAATCTTATAATG
CTGTTAAAGATTGTTTCGGCGATTATGAACTCTTTGTCTTTTTTTCGGTT
CTGTCACGTAAGCAATATTTCTTAAAATTTCGCAGAAATCTCAAAATGTC
TGTCCAGTTTCGATAAAAATGAAATCATCTGTATATACTTAGATAAAAAT
CTAGTTAAATATGAGTAAAACCAGTATAAATTACACCGGTAATTATCATT
TTTGAATAGCGAACCATTACGCAAACATCTTTATCGTGGTCAGAAAAGAG
AACCATATTTATCCAGTCAGCTGGCACACAAAGTTATTTTAACGTTTATT
TAATGTTCAAAACGTCCAAATAACGTTAGACGAGCGTTGAAACAACGTTT
TGTACCAGCTAGGGTAATTATATAGAACAAAACATCTCAGCCTCATAAAA
TCTCCAAAAATTGTCGAAAAGATTCTGGAAGATTTTGGGGTATTTCCTTT
CTTTTTGGTCGAAAACTGCCATATCTAAAGTGTAAAAGAGCAAAGCGGCG
CCGTAAATTAGTAATCAGAGGCGTCTTTTTACGCCCTTTGTGTTTTGGTA
CCCTTCAAAAAAATCGGCCGCTCTGGGGGGGGCACTCCACGCTACTGTTG
ACACCAGTGCCATAGGAAGCATTTTCATATTGGGGGGGCTGAAGTTTAGT
GACACCGCGAGGGCCAACCATGGTTTGGCCCGAGGGGGGGATTTTGAAAA
TTTGAGCTCTAATTGCTTAAAAATACACTCAAAACATGCACATAAAGACA
ATTATGACAAATTAAAAAATAAAAACTTTGCATTTTTCAAAATAACCATT
TTTGAAAAAATTATTAGCTGTTTTTAAATGGTTTTCTTGAATAACNGCTT
AAAAATACACTCAAAACATGCACATAAAGACAATTATGACAAATTAAAAA
ATAAAAACTTTGCATTTTTCAAAATAACCATTTTTGAAAAAATTATTGGT
GGGGGGGGGTATAGCCCCCCCCCTTGCCCCCCAGTTGCTACGGCACTGGT
TGATACGTGATGCTTATCCCAAGCAAATATAAGGTGTTCTCCTGAAAGTC
TTGAGATACGTTGAGGGATATTCCAGAATTTGGCACGATAATTACTTCTC
AGGAGAACCTCCAGGAAAATAAGTTTGTTGATTGGAATGTTTTGCCTCCC
CCCAGGCTAGAGAGGGTTAGGGTTACTTGGAGATATTAAATTTCAATATT
ATCAAAAGAAACATTTTAAAATCTGATATCGAAGTTTTATACCAGTGGAT
ACCGCCTTAAAACAAACAAAAAAAGGTTTTGCATTTTTTTAAAAGCTGCT
AAGGCAATTTTTATTGCTTCGTGAAAAAAATGCAACTTTAGCTATTTTAC
CCCTTAAAACCTACAAAATGGTTTTCTTGAATAACTTTTTATAAAATAGT
CCTTTCCTTTCTCAAATTTTGAACAGTGATTCACTGCTAAGTTACTAATG
CTACAATTAGATCATTGGTACCTAATATTTTCAAAACTGTACGTTAAAAT
CAAATTACACCTTAAACCCTACTAACATTGACCCCTTGTTCACAACTTAC
TGAAACTGGTGAAATTGCAATTCAGGTGCTGAACCGCGATTCAATTTATC
AAATACTTGCTAGAAATCCATTCCCAAAACAATATTTGTATTTTTCAGGA
TGTCATGCTCATAATGCAATTGCGCCTGTTTTTTTGTCAAAAAAACGGCT
TTGAAGCGTCAAAACTTTTATTTACTTCATTTTTGACGTATGTTAAAGTC
TGTCTCGAAATAATTTGCAGCTGGAGAAAAAAATGGCTGTAACTTTTGAT
AGAATTCGAATCAAGCTGTGGTTTTGTGCTCGTTAAAAAGATNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTTTCATT
TTCCTTTTTTTTCTCAATTTTTTTACTTGATAATATTCCACTCACGAATA
TCTTTTTAACGAGCACAAAACCGCAACTTGATTCGAATTTTATCAAAAGT
TACAGCCATTTTTTTCTCCAGCTGCAAATTATTTCGAGACAGACTTTAAT
AATGTTTTTTTAAATCTCAATCAAATTTGTGACATTTTGTTATGCAATAT
GACCATGTTTTGAGAAAGTTGATTTTCAGATTTTATTATCCACTACAATA
AATGAGCTTTAAAATAGAACTTTGAGGGCCTTAAGATTTTTTGGGGGTGT
ACAACAGAAAAAAATCTTATCACCCTTTGAAAAAAAAAGGCCAATAAAAA
GAAAAAGACGGTTATAATTTGGACGGTGGTGGTCAGAGTCAGATTTAATG
TGGAGCAGAAAAAAATTGACAGTCCGTATATATTTTGATAAATTGCTGCA
CACAACGTTGTTTTAACATTCATTTAACGTTATATTAACGTTCGTTTAAC
GTTACATTAAAACATTAGGGTTATCAGATGGACGTTTTGATGACGTTAAG
TGTCGGCTGGGAAGGAAAAAAGGTAAAATTACAAGTAATGCATTGTCGGT
AAGATAATTGTGAGTGGATGGATGTAACCCAGCCGGCACACAACGTCAAA
GCAACGTCCATGTGACACTGTTTTTTTGTCAAATAACGTTATTTGAACGT
TAAAACAACGTTGTGTGCCAGCTGGGAAAAGGCTTAAAAGATATCATTTA
CACGCTAGCACTTTGTAGTATCTACACTGTAACGTACCTTGCACCATTCC
CAGCTGGCACACAACGTTGTTTCAACGTTTATCTAACGTTATATGGACGT
TGTGAACGTTAGATGAACGTTGAAACAACGTATCTTGCACCATTTTCTTA
CACTATATTTTTAAACAAAAGAAAGAACAACTTTCTCCACCCCGCTTGAA
CAAATTTTGAGAAATTCTGCTTTGTCCGTCCGTCCATTCGTTCGTCTGTT
TCCAACTGTTCTCGAGATTGACTCAATAGTTTTTTCTGAATTTTTGCATA
ATGATGCAAAATGATAATAGCCCGATTTTTGAGAAAAAAAATTTTTGAGC
AAATTTGTGCCAAAAACTGCCTAAAAAATCAGGTTTTTTAGACTTTGTGC
GGAATTACTTCAATAATTTTTTCCGATTTTTCGCATAAAGACATAGGGCA
AGGTTCTCTAAAGAGCGGCTGGAGCCGTTGAAAATATTATTACTCAAAGG
GTCAGGAGTTTACCCTTCTTGGGTCTTTTGAAGGGTACGAAAATCACGAG
AAAAAAGTCGATTTTGTCTCCCAAAAGGTAGCTTTTTTGCAAAAATTATA
GTCTCTCCAAAGGGACAGTTTTCATAGGTCAGGCACACATGCTCGACAAT
ATCCAATCCTTGTAGACTCCCTCCCGGTAGCTAATCAGCTGCTGTGGAAG
TGACATAATTCATGATATGTCTTCTACGGACCCAACAACTGATTGGTTGA
AAGTGACGTATTGACTGATTTTACGTCACTTACAACCAATCAGCTATTGC
GTCTGTGATGTAATGTCACAAGACATTGCAGTGGTGCATATCATGAATAT
CGGCAGAAATAGCACTGTTAAATGTTTTAAACATAAATGGACCGCCATTT
CACGATCTTCATAATACGTAAACCTTTTTTATAAGAACATACAGACTATG
TAAGAATGGCAAAAAATATTGAGAACATTTAAGAACATTGGGCTCTATAA
AACACCCAATTTCTTGAAAATTGCACAAAAAAACTCAAAAAGTTAAGAAC
GTACAAAAATCATTTTTAAGGCTTGGGGACACGAGAAGTTTTTTTCGCGT
TGGTGCAATGCAACATGCTCCATCCCACCAACCTGAAACGTTTTCTAGTG
TCTCCACCCCATTTTTCTTTTAATAGCATTTGTGCTTCTCTCACTTTTGT
CCCTGCGACAATGGAGCAAAATTGATTCGAATTAATTTTGCTCCATTGTC
CCAGGGACAAAATCAGCGTGTCTTTTGGGTATTTCCCTCACTTTTTGTCC
CATGAAACAAAAAAAGAAACCATGAGACACGCACTTTTTTTCTTGTGTTG
GTGGGATGGATGGAGCATGCTGCATTGTACCAACGCGAAAAAAAACTTCT
TGTCTCCCCAAGCCTTTACAATTCCATTTTCTTTTGTCAGGTGCTGATCA
TGAAACAACATTTCACATATCCCCAAACGGCCATAACAATGCTACATGCG
GCTCCAAAAACAACAAATGTCGGACAATCAATTACGCTTACCTATTGAAC
CAAATCATTGACGATGCTAAAATCACATTTGTTTTGGAAGCTTCATCTCA
TGAGAGTATATCTTACCAGTTGCATCCTCTTGTCAAAAATAATGGACAAC
ACGATGGTCATTTTAAATTTGTTAAAGACTATCCAGACAAACAGAACCCG
ACCATATATGGAAGCAAGCGTGCAGTTATCCAAACTGGAGGCGTAATCGA
TATACAGTTTGACAGTATCAATCTCAACGATGTGCTACTTCTGCGTAAAA
ACATCCCAAGAATCAATATATTCATACGAAATGCATCTATCAATTTAAAT
GAAAAAAAAGAGTTCATAGCATTACATCAACAGACAGCTAACAGTGTTGT
CAACATTGAAATACAATCTTGTATCTTGAAGTCACCACCTACTGCTAGAT
GGATGCATATATCAATACTAGATCCAAATCCAAAAAACAATATCAAACTA
TCAAACATAACTATCCAAGGAGGTAGTTTCTTTATTGAGAACATGGTATC
ATTTGATCTGGTTGATGCGGTGATTAAGGATTCTATCCTGCCCTCCAACA
ATGCTTTCTTTGAGTTATCACATGTAAAAAAAGTACTGATCAATAACTTT
ACAGTACGAAACTTAACATCACGGCGTTTAATTTATGTCGGAACAGATTC
CTCTATTAACATTAGTAATGTAAATATTCTCAGAAGCTCATTTGAGGAAA
TCATCGACGTACGACAATCGACAATCAGTTTTGACAACGTCAATATAACG
AACACTTTTGCTGAAAATTACCTTTTTAACTTTGAGAAAAGTAAAAGTGA
AGAATCTAACGGAGTCAACATAATTTCATCAAATGCTGCTAAAGGTTTTA
TTCGTCTACATGAAAGTGAAGTTAACGTTTTGGACTTCAAAATCACCGAT
ACTGGAAAAGCTAAAATGAAACATTCCTTCTTTATCTCTGGACGAGACAG
CAAACTATATTTCCAGGGCGAGTTATCTCTGACATCGATGGACTTCACCG
GCGACTTATTTGACGTTCGAGATAATGCTGAACTACATGTTGAGCACTTG
CATATGCAGAATATCGTTTTCAGGGATAGAATTTTATATTCACAACATTC
CCCTGCAATTGAGATAATACACTTCGAGCTAATCAATGTGACTGCATCAA
AGAATTTTCTTCATTTGGAAAACTCTAATATCCATGTGCATCTGATGAAT
ATAAAAAACTCTGACATGCGAACCCTTTTTGATGCTACGCAATCGGAGAT
CAAGTTAGAGAAATTCAAAATGCTCGATTCAAAAATATCCGAAAATGTTT
TCAACATGGTTGGAGGTACATTTTTTTCCAAGATCAAAGTCCACATTTCC
AATTCGTCTGTGTCGCGTTTCATTAGAGCCACAGATGTAATGATAATCAT
TGAAGATTTCGAAATCGAAAAATCTCACTTCGAATTAGAAAGTGCACTTT
TGGATGAATGCGCATTTACCGTGGTTAAAATGAAAGTCGTGAAGACGGAT
TTTCATTCCGGACCCGTACTTGTAACAATGTTTAGTAAAGCTTTATTCGG
TGATTTTGAAATGGTTGAAACAACTGTGGTACATAAGCATGCGTTCCTGT
TGAAAAAATCTAATTTCACGGCAACGAATTTCGTCGTCAGGACAACTAAC
ATAAAACAAAGGAGTTTATTTTTCATCGAAGACAGCGTTGCTATAGAATT
CAAAGATCTGCAATTGACAGGGAATACGTATCGTTCTCAAGTGTTTGAAA
TTGAAAATACAGAGCAAGTATATTTCGAAAAGGTTGTGGCATTAGAGAAT
AAATTCTTTGGTTTTCTAAAACTCCAAGATGTTAAACCCTTTGTAATTCG
AAACTTTGACTTCTTCGAAAATACAGCTCTTGGTCAAAATGCTTTTGTCG
AAGCAATTAACTCTGAATCAATCTTCACCGATGGTTCAATCCGTTTTAAA
AAGGTTGCTTTGGGAAGCCATTTTTTCTCATTTAGACAATCACCATCATT
GAGTATGTCCAATACAAGCATTATTTTACCAGATACGAAATCTGTTACAA
ATTATCAAATTCTGTCTGTAGAGAATAAAAACAAGAACCGTTCAAGTTTC
AAAGACTTTACTGCAACGTGTGGCGAACACTTTGATATTGTTAAAAATGT
CACTCCTTTATCAGCAGCAGATCACAACAATGAATTGTTGAACATAACAT
GTATACGATGCCCACATAATACTTTTTCGATGGGTACTAGTTCTATAAAT
ATCAAAGATTCAAGCGGTAACTACAATGAAAGTATATCAAGAACCAAATG
CTCGCCTTGTCCTACTGGATCAACATGTTATAACAATAAGTTAGTGGCAC
GTGACAATTTTTATGGATTCTACCAAAATGAGACAGAGGATTTTCGATTT
GTGGTGTGCCCTAAAGATTATTGTTGCTCTAAAGAAAGTCAGAAATGTAA
TTCTCCAACCACCTGTAATTTACACCGAAAAGGAAGATTTTGTGGCAAAT
GTGAAGAAGGTTATTTCGTCAGTATTGTCAATAATAAGTGTGTTGAGAAT
TCAAAATGCACTACTTCTAATCGTCAATGGTTTCGGACTTTGTTTATTAT
CACTACACTTATCATAGCTGTTGTATTAACTGGCCTCAAAGATTTCATGG
CTATTTTGAAA

Coding sequence (CDS) from alignment at sc0001313:60207..69967-

>TCONS_00035449 ID=TCONS_00035449|Name=TCONS_00035449|organism=Clytia hemisphaerica|type=CDS|length=5682bp|location=Sequence derived from alignment at sc0001313:60207..69967- (Clytia hemisphaerica)
GTGCTGATCATGAAACAACATTTCACATATCCCCAAACGGCCATAACAAT
GCTACATGCGGCTCCAAAAACAACAAATGTCGGACAATCAATTACGCTTA
CCTATTGAACCAAATCATTGACGATGCTAAAATCACATTTGTTTTGGAAG
CTTCATCTCATGAGAGTATATCTTACCAGTTGCATCCTCTTGTCAAAAAT
AATGGACAACACGATGGTCATTTTAAATTTGTTAAAGACTATCCAGACAA
ACAGAACCCGACCATATATGGAAGCAAGCGTGCAGTTATCCAAACTGGAG
GCGTAATCGATATACAGTTTGACAGTATCAATCTCAACGATGTGCTACTT
CTGCGTAAAAACATCCCAAGAATCAATATATTCATACGAAATGCATCTAT
CAATTTAAATGAAAAAAAAGAGTTCATAGCATTACATCAACAGACAGCTA
ACAGTGTTGTCAACATTGAAATACAATCTTGTATCTTGAAGTCACCACCT
ACTGCTAGATGGATGCATATATCAATACTAGATCCAAATCCAAAAAACAA
TATCAAACTATCAAACATAACTATCCAAGGAGGTAGTTTCTTTATTGAGA
ACATGGTATCATTTGATCTGGTTGATGCGGTGATTAAGGATTCTATCCTG
CCCTCCAACAATGCTTTCTTTGAGTTATCACATGTAAAAAAAGTACTGAT
CAATAACTTTACAGTACGAAACTTAACATCACGGCGTTTAATTTATGTCG
GAACAGATTCCTCTATTAACATTAGTAATGTAAATATTCTCAGAAGCTCA
TTTGAGGAAATCATCGACGTACGACAATCGACAATCAGTTTTGACAACGT
CAATATAACGAACACTTTTGCTGAAAATTACCTTTTTAACTTTGAGAAAA
GTAAAAGTGAAGAATCTAACGGAGTCAACATAATTTCATCAAATGCTGCT
AAAGGTTTTATTCGTCTACATGAAAGTGAAGTTAACGTTTTGGACTTCAA
AATCACCGATACTGGAAAAGCTAAAATGAAACATTCCTTCTTTATCTCTG
GACGAGACAGCAAACTATATTTCCAGGGCGAGTTATCTCTGACATCGATG
GACTTCACCGGCGACTTATTTGACGTTCGAGATAATGCTGAACTACATGT
TGAGCACTTGCATATGCAGAATATCGTTTTCAGGGATAGAATTTTATATT
CACAACATTCCCCTGCAATTGAGATAATACACTTCGAGCTAATCAATGTG
ACTGCATCAAAGAATTTTCTTCATTTGGAAAACTCTAATATCCATGTGCA
TCTGATGAATATAAAAAACTCTGACATGCGAACCCTTTTTGATGCTACGC
AATCGGAGATCAAGTTAGAGAAATTCAAAATGCTCGATTCAAAAATATCC
GAAAATGTTTTCAACATGGTTGGAGGTACATTTTTTTCCAAGATCAAAGT
CCACATTTCCAATTCGTCTGTGTCGCGTTTCATTAGAGCCACAGATGTAA
TGATAATCATTGAAGATTTCGAAATCGAAAAATCTCACTTCGAATTAGAA
AGTGCACTTTTGGATGAATGCGCATTTACCGTGGTTAAAATGAAAGTCGT
GAAGACGGATTTTCATTCCGGACCCGTACTTGTAACAATGTTTAGTAAAG
CTTTATTCGGTGATTTTGAAATGGTTGAAACAACTGTGGTACATAAGCAT
GCGTTCCTGTTGAAAAAATCTAATTTCACGGCAACGAATTTCGTCGTCAG
GACAACTAACATAAAACAAAGGAGTTTATTTTTCATCGAAGACAGCGTTG
CTATAGAATTCAAAGATCTGCAATTGACAGGGAATACGTATCGTTCTCAA
GTGTTTGAAATTGAAAATACAGAGCAAGTATATTTCGAAAAGGTTGTGGC
ATTAGAGAATAAATTCTTTGGTTTTCTAAAACTCCAAGATGTTAAACCCT
TTGTAATTCGAAACTTTGACTTCTTCGAAAATACAGCTCTTGGTCAAAAT
GCTTTTGTCGAAGCAATTAACTCTGAATCAATCTTCACCGATGGTTCAAT
CCGTTTTAAAAAGGTTGCTTTGGGAAGCCATTTTTTCTCATTTAGACAAT
CACCATCATTGAGTATGTCCAATACAAGCATTATTTTACCAGATACGAAA
TCTGTTACAAATTATCAAATTCTGTCTGTAGAGAATAAAAACAAGAACCG
TTCAAGTTTCAAAGACTTTACTGCAACGTGTGGCGAACACTTTGATATTG
TTAAAAATGTCACTCCTTTATCAGCAGCAGATCACAACAATGAATTGTTG
AACATAACATGTATACGATGCCCACATAATACTTTTTCGATGGGTACTAG
TTCTATAAATATCAAAGATTCAAGCGGTAACTACAATGAAAGTATATCAA
GAACCAAATGCTCGCCTTGTCCTACTGGATCAACATGTTATAACAATAAG
TTAGTGGCACGTGACAATTTTTATGGATTCTACCAAAATGAGACAGAGGA
TTTTCGATTTGTGGTGTGCCCTAAAGATTATTGTTGCTCTAAAGAAAGTC
AGAAATGTAATTCTCCAACCACCTGTAATTTACACCGAAAAGGAAGATTT
TGTGGCAAATGTGAAGAAGGTTATTTCGTCAGTATTGTCAATAATAAGTG
TGTTGAGAATTCAAAATGCACTACTTCTAATCGTCAATGGTTTCGGACTT
TGTTTATTATCACTACACTTATCATAGCTGTTGTATTAACTGGCCTCAAA
GATTTCATGGCTATTTTGAAAAACATGGCTCGTCCTTGCTGGCCTTTCTT
GTGCATCACCGCCATTCTGATAGCAAACTGTTCTGCAAAAGGTGCTGATC
ATGAAACAACATTTCACATATCCCCAAACGGCCATAACAATGCTACATGC
GGCTCCAAAAACAACAAATGTCGGACAATCAATTACGCTTACCTATTGAA
CCAAATCATTGACGATGCTAAAATCACATTTGTTTTGGAAGCTTCATCTC
ATGAGAGTATATCTTACCAGTTGCATCCTCTTGTCAAAAATAATGGACAA
CACGATGGTCATTTTAAATTTGTTAAAGACTATCCAGACAAACAGAACCC
GACCATATATGGAAGCAAGCGTGCAGTTATCCAAACTGGAGGCGTAATCG
ATATACAGTTTGACAGTATCAATCTCAACGATGTGCTACTTCTGCGTAAA
AACATCCCAAGAATCAATATATTCATACGAAATGCATCTATCAATTTAAA
TGAAAAAAAAGAGTTCATAGCATTACATCAACAGACAGCTAACAGTGTTG
TCAACATTGAAATACAATCTTGTATCTTGAAGTCACCACCTACTGCTAGA
TGGATGCATATATCAATACTAGATCCAAATCCAAAAAACAATATCAAACT
ATCAAACATAACTATCCAAGGAGGTAGTTTCTTTATTGAGAACATGGTAT
CATTTGATCTGGTTGATGCGGTGATTAAGGATTCTATCCTGCCCTCCAAC
AATGCTTTCTTTGAGTTATCACATGTAAAAAAAGTACTGATCAATAACTT
TACAGTACGAAACTTAACATCACGGCGTTTAATTTATGTCGGAACAGATT
CCTCTATTAACATTAGTAATGTAAATATTCTCAGAAGCTCATTTGAGGAA
ATCATCGACGTACGACAATCGACAATCAGTTTTGACAACGTCAATATAAC
GAACACTTTTGCTGAAAATTACCTTTTTAACTTTGAGAAAAGTAAAAGTG
AAGAATCTAACGGAGTCAACATAATTTCATCAAATGCTGCTAAAGGTTTT
ATTCGTCTACATGAAAGTGAAGTTAACGTTTTGGACTTCAAAATCACCGA
TACTGGAAAAGCTAAAATGAAACATTCCTTCTTTATCTCTGGACGAGACA
GCAAACTATATTTCCAGGGCGAGTTATCTCTGACATCGATGGACTTCACC
GGCGACTTATTTGACGTTCGAGATAATGCTGAACTACATGTTGAGCACTT
GCATATGCAGAATATCGTTTTCAGGGATAGAATTTTATATTCACAACATT
CCCCTGCAATTGAGATAATACACTTCGAGCTAATCAATGTGACTGCATCA
AAGAATTTTCTTCATTTGGAAAACTCTAATATCCATGTGCATCTGATGAA
TATAAAAAACTCTGACATGCGAACCCTTTTTGATGCTACGCAATCGGAGA
TCAAGTTAGAGAAATTCAAAATGCTCGATTCAAAAATATCCGAAAATGTT
TTCAACATGGTTGGAGGTACATTTTTTTCCAAGATCAAAGTCCACATTTC
CAATTCGTCTGTGTCGCGTTTCATTAGAGCCACAGATGTAATGATAATCA
TTGAAGATTTCGAAATCGAAAAATCTCACTTCGAATTAGAAAGTGCACTT
TTGGATGAATGCGCATTTACCGTGGTTAAAATGAAAGTCGTGAAGACGGA
TTTTCATTCCGGACCCGTACTTGTAACAATGTTTAGTAAAGCTTTATTCG
GTGATTTTGAAATGGTTGAAACAACTGTGGTACATAAGCATGCGTTCCTG
TTGAAAAAATCTAATTTCACGGCAACGAATTTCGTCGTCAGGACAACTAA
CATAAAACAAAGGAGTTTATTTTTCATCGAAGACAGCGTTGCTATAGAAT
TCAAAGATCTGCAATTGACAGGGAATACGTATCGTTCTCAAGTGTTTGAA
ATTGAAAATACAGAGCAAGTATATTTCGAAAAGGTTGTGGCATTAGAGAA
TAAATTCTTTGGTTTTCTAAAACTCCAAGATGTTAAACCCTTTGTAATTC
GAAACTTTGACTTCTTCGAAAATACAGCTCTTGGTCAAAATGCTTTTGTC
GAAGCAATTAACTCTGAATCAATCTTCACCGATGGTTCAATCCGTTTTAA
AAAGGTTGCTTTGGGAAGCCATTTTTTCTCATTTAGACAATCACCATCAT
TGAGTATGTCCAATACAAGCATTATTTTACCAGATACGAAATCTGTTACA
AATTATCAAATTCTGTCTGTAGAGAATAAAAACAAGAACCGTTCAAGTTT
CAAAGACTTTACTGCAACGTGTGGCGAACACTTTGATATTGTTAAAAATG
TCACTCCTTTATCAGCAGCAGATCACAACAATGAATTGTTGAACATAACA
TGTATACGATGCCCACATAATACTTTTTCGATGGGTACTAGTTCTATAAA
TATCAAAGATTCAAGCGGTAACTACAATGAAAGTATATCAAGAACCAAAT
GCTCGCCTTGTCCTACTGGATCAACATGTTATAACAATAAGTTAGTGGCA
CGTGACAATTTTTATGGATTCTACCAAAATGAGACAGAGGATTTTCGATT
TGTGGTGTGCCCTAAAGATTATTGTTGCTCTAAAGAAAGTCAGAAATGTA
ATTCTCCAACCACCTGTAATTTACACCGAAAAGGAAGATTTTGTGGCAAA
TGTGAAGAAGGTTATTTCGTCAGTATTGTCAATAATAAGTGTGTTGAGAA
TTCAAAATGCACTACTTCTAATCGTCAATGGTTTCGGACTTTGTTTATTA
TCACTACACTTATCATAGCTGTTGTATTAACTGGCCTCAAAGATTTCATG
GCTATTTTGAAAAACATGGCTCGTCCTTGCTGGCCTTTCTTGTGCATCAC
CGCCATTCTGATAGCAAACTGTTCTGCAAAAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_020721XLOC_020721Clytia hemisphaericagene
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00035449-proteinTCONS_00035449-proteinClytia hemisphaericapolypeptide
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00035449-exon-sc0001313-1575043694:69896..69967TCONS_00035449-exon-sc0001313-1575043694:69896..69967Clytia hemisphaericaexon
TCONS_00035449-exon-sc0001313-1575043694:60207..62977TCONS_00035449-exon-sc0001313-1575043694:60207..62977Clytia hemisphaericaexon
TCONS_00035449-exon-sc0001313-1510915933:69896..69967TCONS_00035449-exon-sc0001313-1510915933:69896..69967Clytia hemisphaericaexon
TCONS_00035449-exon-sc0001313-1510915933:60207..62977TCONS_00035449-exon-sc0001313-1510915933:60207..62977Clytia hemisphaericaexon
TCONS_00035449-exon-sc0001313-1491911889:69896..69967TCONS_00035449-exon-sc0001313-1491911889:69896..69967Clytia hemisphaericaexon
TCONS_00035449-exon-sc0001313-1491911889:60207..62977TCONS_00035449-exon-sc0001313-1491911889:60207..62977Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0001313supercontigsc0001313:60207..69967 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.121222	0.0525382	0.0152505	0.0298404	0.345114	0.25836	0.588768	0.826797	0.227004	0.44989	0.122814	0.143526	0.0895791	0.0372115	0.00764823	0.0328309	0.151669	0.114001	0.028636	0	2.08364	2.83936	0.617739	0.982824	2.8344	2.52964	2.05005	2.18786	0.0747485	0.0609255
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00035449 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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