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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00035442 ID=TCONS_00035442|Name=TCONS_00035442|organism=Clytia hemisphaerica|type=transcript|length=288bp
ACGCTACAAACCCTATTAAACAGgtttttttttacGGGGTCACTTTACTC
AAAGAAAACACAAGAACAAGCTCAAAGAGGATCTTGGTGATATAACGACA
ATGTCTTCAACACTTTTGGAAAGACAACTTTTAAAGTAGTTtctgtaaaa
taattttttaattttattagcTAGAGAAAAGAAGAATATCTTGTAGTTAA
CTTCACCCTTTCTTCTTCCATGCAATTTAGTCCTCGTTTAATTGCTTCAC
TTCTCTCATTTTGTAAAACatccttttcaataaaaaac Run BLAST on NCBI transcript from alignment at sc0001312:70156..71948- Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00035442 ID=TCONS_00035442|Name=TCONS_00035442|organism=Clytia hemisphaerica|type=transcript|length=1793bp|location=Sequence derived from alignment at sc0001312:70156..71948- (Clytia hemisphaerica)
ACGCTACAAACCCTATTAAACAGGTAATGAATTTAACGACTTTATAAACA
GTTCTGAAGGTATGGTCGAAATTATTTGTCGTTTATTATTCCAAGCAATC
GATTGCAAAAATGGAGTAATTTTTATGTCAGTGAAGTTAAAATTGGCTTT
AACTTTGATTGTTTAAATGCAACTATTTGTTATTCATTTGTTTATGTTAA
TGAATTGAAAAATGGTTATTGTGAACAAGCTGTGTCTTTTAGCAACTTCA
TATCACATTAATGTCTCCTTTAGCTTTCTGGGAAACCTGTATCTGAAACT
CAGTGCTCAAAGAAGCCTATGCCCATATCCCTCCTTTNAATGCCCAAAAT
GTGACGGAGTCAGATTTTTAAGGAAAATATTTTTGGGCAAATTTGGGCCA
AAAACTGCTTAAAAATAGGGTTTTTTGGGCCTGAATGGTTTAAGTGATTT
TCGTATTTGGGGAAATTCCTTTTTNATTCAAGCACGAAACTTCTTCTCTT
CGAGATTATAAGCTCTTTTTTGATTATTTAAAGTCTTCAATTTACATTGC
ATGCGCACTAGAGTTTTAGAGAAACAAAAGAGATTTTGAAAACGAAAGCC
TATCAGCTGTATTCCAAACATTCTGGTATTTAAGGTCCTGATTTCAGCAA
TATAATTAGTATATTTTTTCCCTGGAATTCTTACATCGTGTAACTCATTG
GGAAAAAACCGTTTTTGCTGTGTTTTTTGGACCTACCTCCGGNCAATCCA
ATAGATAACCTTCTGGGGTCTTCAAACCTTCTTTAGAATGATCTTATCAA
AATTGATTTTATTTCTGAAATCAGTACCAGAAATCAAGTTCCAAGCACTA
AAGGATAAAAAGTTCATTTCTTTCTTCTTAATTTGTTTTCTTCATTTTCA
AGAATCTTTTAAACATAAGCAGTATATAATTTGTAAACTTTGTAAAAAAT
TGTCATGGAGTGTCAGAATCATTTATCAGTTAGAGTCTTTGGGTTGCTAC
ACCCAATTACCCCAATCATCATGCATTATCTGGCAATATTTCACAAGCTT
TGATTTTGATCGTCCTCCTCACTTTCAAATTTCTTTTTAGGTTTTTTTTT
ACGTGGTCACTTTACTCAAAGAAAACACAAGAACAAGCTCAAAGAGGATC
TTGGTGATATAACGACAATGTCTTCAACACTTTTGGAAAGACAACTTTTA
AAGTAGTTTCTGTAAAATAATTTTTTAATTTTATTAGCTAGAGAAAAGAA
GAATATCTTGTAGTTAACTTCACCCTTTCTTCTTCCATGCAATTTAGTCC
TCGTTTAATTGCTTCACTTCTCTCATTTTGTAAAACATCCTTTTCAATAA
AAAACAATAATAATTAGAACTTATGTAACTTGCATGTGGTTCCGTTTTAA
TTCTACCATAATTNCAGTTAGAGTCTTTGGGTTGCTACACCCAATTACCC
CAATCATCATGCATTATCTGGCAATATTTCACAAGCTTTGATTTTGATGG
TCCTCCTCACTTTCAAATTTCTTTTTAGGTTTTTTTTTACGGGGTCACTT
TACTCAAAGAAAACACAAGAACAAGCTCAAAGAGGATCTTGGTGATATAA
CGACAATGTCTTCAACACTTTTGGAAAGACAACTTTTAAAGTAGTTTCTG
TAAAATAATTTTTTAATTTTATTAGCTAGAGAAAAGAAGAATATCTTGTA
GTTAACTTCACCCTTTCTTCTTCCATGCAATTTAGTCCTCGTTTAATTGC
TTCACTTCTCTCATTTTGTAAAACATCCTTTTCAATAAAAAAC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00035442-exon-sc0001312-1575043694:71926..71948 | TCONS_00035442-exon-sc0001312-1575043694:71926..71948 | Clytia hemisphaerica | exon |
| TCONS_00035442-exon-sc0001312-1575043694:70156..70420 | TCONS_00035442-exon-sc0001312-1575043694:70156..70420 | Clytia hemisphaerica | exon |
| TCONS_00035442-exon-sc0001312-1510915933:71926..71948 | TCONS_00035442-exon-sc0001312-1510915933:71926..71948 | Clytia hemisphaerica | exon |
| TCONS_00035442-exon-sc0001312-1510915933:70156..70420 | TCONS_00035442-exon-sc0001312-1510915933:70156..70420 | Clytia hemisphaerica | exon |
| TCONS_00035442-exon-sc0001312-1491911889:71926..71948 | TCONS_00035442-exon-sc0001312-1491911889:71926..71948 | Clytia hemisphaerica | exon |
| TCONS_00035442-exon-sc0001312-1491911889:70156..70420 | TCONS_00035442-exon-sc0001312-1491911889:70156..70420 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0001312 | supercontig | sc0001312:70156..71948 - |
Blast
The following BLAST results are available for this feature:
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