TCONS_00035440 (transcript) - C. hemisphaerica

Overview
NameTCONS_00035440
Unique NameTCONS_00035440
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1354

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00035440 ID=TCONS_00035440|Name=TCONS_00035440|organism=Clytia hemisphaerica|type=transcript|length=1354bp
ccagggggttgagcatatttttaagagtggatattcagggggtctttact
aataaagaaggatatccagggggtttgatacttcgaaaaatcaatataga
tttacaaaaaatatgttttgaatttctaagtGATATGTCGATTACTTGAT
AGCCTTGTTTGATATTCATAGTGAAGagtaaagaaaaagaatttaacTGA
AAGTAAAGACAAAAAGATGGCTGGCGACAAGATGAAATGTTTAATGAAAG
AGAAGGAAGAACCAGGATACACCTTAAAAGAAATTGATGTACCCATCCCT
CAAGAAGGAGAACTCTTGGTCAAATGTCTCAAATCATCCATCTGTGGATC
TGATATCAACTTGTTCGTTTGGAATGATAttgCTCGAAATATCGCAACAG
TACCTTTCATCCCCGGTCACGAAGGAGTCAGTGAGATCGTGAAAGTTGGT
GCAGGCTGCCCTGAAGAGTACAAAGTTGGATTGACAGTGTGTTGTGAAAA
CCATTTTTACTGTGGAACCTGCTATCAATGCTTACATAACCAACAGCACA
TTTGTCAGAACCTCAGTCAATATGGTCACGGTAAAGGAACTATACACGGC
GGTTTTTCGGAATACTCAATTATTCCGACAAGATATGCTTACATCCTGAA
AAGAAACTTGGATCCGGAGATCGCATGCTTGTTAGAACCGTTCGGTGTTT
CACATCAAGGTGTTGAAAAACTGCAACCAAAGGATGAAACTGTCCTCGTC
CAAGGTTGTGGGCCCATTGGATTGTATGCTGTCAGTTTATtTATGGAGGA
GACGAATAATGACGGAGTAGGTTGTCTTTTAGAAGCATCAGGAGCTCAAC
CTCTTGTAAACAACTGCTTCCAAATGCTCAGGAAGGGCGGAACAGTGGTA
TTGATAGGAGTACCAAAGAAAGCATTGTATGTGGAGAACGTCAACCGTGA
CATCCTGTTCAAATCATTGACCCTACACACTGTACATGGCCGAAAGATCT
TCCACACCTGGGAACATTGTGAACGAATATTGGCCGATGGAAAaatTGAT
ATTTCAGCCACCATTTCTCATCGTTTCGGAATGTCTGAATGGGAACAGGC
ATTTGAGGCGTTGATGTCAGGCAAGTGCTGCAAAATTATGATCGACCCTC
AAAGATAACGATTAACCTTTATACGAATTATACGAAGATTGGAAAGGTGC
TTATGTTCagttaaaatttatttcaatttttagtaCCCGTCAGTAGGTCC
TTAAAAATTTAGAGAACGCAAATTGTCCACGTAATTTTGAGGTAGTCTTA
CGCAAATTCAAGCATAAATATTCTAAACATTAAATACGAAAACGAGGATA
GTGG
Run BLAST on NCBI

transcript from alignment at sc0001312:49027..61132-

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00035440 ID=TCONS_00035440|Name=TCONS_00035440|organism=Clytia hemisphaerica|type=transcript|length=12106bp|location=Sequence derived from alignment at sc0001312:49027..61132- (Clytia hemisphaerica)
CCAGGGGGTTGAGCATATTTTTAAGAGTGGATATTCAGGGGGTCTTTACT
AATAAAGAAGGATATCCAGGGGGTTTGATACTTCGAAAAATCAATATAGA
TTTACAAAAAATATGTTTTGAATTTCTAAGTGATATGTCGATTACTTGAT
AGCCTTGTTTGATATTCATAGTGAAGAGTAAAGAAAAAGAATTTAACTGA
AAGTAAAGACAAAAAGATGGCTGGCGACAAGATGAAATGTTTAATGAAAG
AGAAGGAAGAACCAGGATACACCTTAAAAGAAATTGATGTACCCATCCCT
CAAGAAGGAGAACTCTTGGTCAAATGTCTCAAATCATCCATCTGTGGATC
TGATATCAACTTGTTCGTTTGGAATGATAGTCAGTTGCTGCTTTATCATC
TCATACTATATCAGTTTTAAATCAATAATTGCCAAGAAATCTACCTTATT
ACACGTGAATCGGTTACCCTTGCTTTAATTACAATCGTTTAACAAAATTT
GAGCCGTGGTAATTTTCGAAAACCCTGTCTTTCACGTTAATAAATTGTCA
CATTTCACTCATTTTTCCCGCGTTAAATACTTGCTTAGTTATATAAGTGT
AATAAGGTATTTGAAAATGATGACGTTATCATACATCTTTATATTAATTA
GTAAAAACTCTACTCGAAGAATTTAGTATGGTGCTAGCTGCCTATAAACA
TTCTTCCTGTTTTTCATTTTTTTCAGTTGCTCGAAATATCGCAACAGTAC
CTTTCATCCCCGGTCACGAAGGAGTCAGTGAGGTAATATTGAAGCCGTAA
GGACTAGGGATGTGTGCATTGCAATGGTACACTTAGATTTTCTTATTATT
TAACGATTCACCCAAGACATCTATTCAAAGATTTATAATCTTTAACATGA
AATTTTGATAGGGTGCCTCCTCTTTCTTCTATATAAAGGTTGAGTGCTTG
GGTCATATCCTATACATCAATACCGATATTATGTACCGAGGTATGAGTGT
TTTTCTGCGACGGAGACGGTAAGGTTCTAATTTGACTAGATCATGTCCAA
CTGGGGACGACGATAAATCAGCACTTTTACCGTCCTCGATTTTGAGCATC
AGAACTGCGTCTTCAAAAACTTGTACAAATACTCACTAAAACTTTTAACT
CGACTGTTTATTCTTTTACTTCTAGATCGTGAAAGTTGGTGCAGGCTGCC
CTGAAGAGTACAAAGTTGGATTGACAGTGTGTTGTGAAAACCATTTTTAC
TGTGGAACCTGCTATCAATGCTTACATAGTAAGACGTGTTCCGTTCTATT
CATTCTATAAAAAGCTTTATTTTTATTTTTGGTGGTTGTATGACACCTTT
TTTGGGAAAACAGAAATAGAAATAATGTTGATTCCAGAAATGTGAGTGTT
ATACGACATTGTATATCTTCTATAATTTCCATAACATTTGGTATCTACCT
ATTTCCATAGACCAACAGCACATTTGTCAGAACCTCAGTCAATATGGTCA
CGGTAAAGGAACTATACACGGCGGTAAGTCAGACAGAAAATAAATCATCT
TTCAACTCTCCTTCCATTCGTTCAATCGAGCAAATCCTCTCCTCAAAGGT
TTGCTATTTGTCCTTTGTTTGTTTTTTTAATTCAAGTTCTGAAAGATTTG
AGATGTTTTTACGCTGAAAACACAATTCTGATCATTTCCCGAGTTTTTTG
TCGCGAAAAGCGAAAATCTCATAAAAATCAATACTATCAATGTTTTGGAG
ACAGGTTGAATTGAGCTATTAATGTTATGAAATATAACTTGTTCACTTTG
GTGCAGGTTTTTCGGAATACTCAATTATTCCGACAAGATATGCTTACATC
CTGAAAAGAAACTTGGATCCGGAGATCGCATGCTTGTTAGAACGTAAGAA
ATAATTTTAATCCTGTCGTACTCTAATCAATAAAATACCGCGTGGTTTGA
ATGGAAATGAAATATGCTTTCAGCTCAAACTAATTTTATTAAGAGTCTCA
ATTTAATGAGTTTTGACTGCAAAAGACTATAACTTTTAATTTACAAAGTT
AAAATTCAAAAAGCTCAGGAGGTTGTCAATCATCTAAAGTATTCCCGAGT
CAGCCGGTATTATAATTGGTGTCTTAAACTCTGGTTTGGACGACCCACTT
TGTGCGCCATGCCTATTCTAATTGTGAATTAAATTTGGCGGCGAGTGGGC
AGAAAGCTGTCTAAAGCGAAATATTATAGTCGACACGGTCCGGCTTTCTT
TTTATTCCAATCGAATTGTTTCGTCGATCATAATCAAGAAAATGGGCAGA
AAGCGGATTCTCTTTCGAAAGCCGATTTGATGATATAGTCCGGGAGCCAA
ACCCAAAAAATGGCATTTTGCTTAAACCAAGATTCTAAAGGATAAAGTAT
ACATTTTTGGAATCCTCAACTATCCTAGTTTTGGAAATGGTCGGTCCCCA
AAGCTAACTCCTGGTCAATTTTTCATACTGGGCCCGAGTTTAGGGGGTAC
TTTTTACCCTTTGTAAGGATTTGTTAAGGAAAATGCCATTCCAGGGGTGA
TATAATTTGATGTATCTAGTCAATCAGTTGACCAATTGCTTTGAAACTTT
GCAAAAAGTTTCAAGGTAGGCTGATGATTGTTTTCGGCAAAAAATTTTTG
TGAAAAATTATTTTTATAGGTTTGCCTGGGGAAAAAAAGGGAAAATTTGG
GTATTTTAACTAAATTTTGACCCTTTATAAGTCTGGGACCTACCCAAACA
ACTTTTAATGAGACACAAACTAGGTGTTATGATAGACTTTAATGCAATAC
ATCAGAAAAATTTCAAACAGACAGTATTTAGTATTATTTCAGGGCTGCAG
GGGGTAAAATTGCCCATTTTTATGGGTTTTTACCTTATTTGAGNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNATCAGGGGGTAAATACACCACTTCTTGGTAGT
TGTTGCCTGAATTTGGATGTTTTTATTGTATGGTAGCCTCAAATTTATGA
AATTTTGAGATGGAAACCAGTTATTTACCCTTCAGTCATTTTTTAGTATT
TTTGTTGACAACCTACTCAAATGATGACGGATTTAAAACTTAAGTTATGG
CCAAATGATAACATTTATTTGACGTAATTTTGTCAGTTTTTGCTTTGAGA
TTCCACTATATTGCTATTCAGAGCTTNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNGCAAAAATGATCAGTCAAATTATG
AGTATGTAGTACATTATGAGTATGCAGAGGACCGTTAGTTTTGTTTTCAC
AAAACGATTAGAAATTTTTCATCAAAGCAGGCCTTAACATTGACACAGCA
CTTTTATTTCTACCCAAGTTAACAATATTTTACAAATTATTAGGCTCCAA
ATAACTATTCTACTTAAAAACCAGTACAGGGACCATTTTTGGAAGNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNGGAAGCTCTGAATAGCAATAT
AGTGGAATTTCAAAGCAAAAACTGACAAAATTACGTCAAAAAATGTTATA
ATTTGGCCATAACTTAAGTTAAATCCCTCATTATTTTGTGTAGATTGTCA
ACAAAAGTACTAAAAAATGACTGAAGGGTATATAACTGGTTTCCATCTCA
AAATTTCATAAATTTGAGGCTACCATACAATAAAGACATCCAAATTCAGG
CAACAACTACCAAGAAGTGGTGTATTTACCCCCTGATTTGCCCACAGTGA
CCCTGATTACAGACAATGAAAACCACAAATAACTTTCNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNCTCAAATAAGGTAAAAACCCATAAAAATGGGCAATTTTACCCCCTG
CAGCCCTGAAATAATACTAAATACTGTCTGTTTGAAATTTTTCTGATGTA
TTGCATTAAAGTCTATCATAACACCTAGTTTGTGTCTCATTAAAAGTTGT
TTGGGTAGGTCCCAGACTTATAAAGGGTCAAAATTTAGTTAAAATACCCA
AATTTTCCCTTTTTTTCCCCAGGCAAACCTATAAAAATAATTTTTCACAA
AAATTTTTTGCCGAAAACAATCATCAGCCTACCTTGAAACTTTTTGCAAA
GTTTCAAAGCAATTGGTCAACTGATTGAATAGATACAGCAAATCATATCA
CCCCTGGAATGGCATTTTCCTTAACAAATCCTTACAAAGGGTAAAAAGTA
CCCCCTAAACTCGGGCCCAGTATGAAAAATTGACCAGGAGTTAGCTTTGG
GGACCGACCATTTCCAAAACTAGGATAGTTGAGGATTCTAAAAATGTATA
GTTTATCCTGTAGAATCTTGGGTTAAGCAAAAGTGTTATTTAAGGAGATA
TAGGATTTGACTCCCGGACTAATATGAGCCCTCCCCACTGGGGAATGGGT
CCTACTCCTTGCGAAGTAGGAATTCCTCCTCTTTCGATTTGGAACGCATA
GCGCTGTCCAGACACCGCTGTGCACGCGAGACTCGCGAGACATAGATACC
ATGATGCATAGTGATGACACTCGAACCACGCGGGAGAGCATATAGCTCGT
CGCAGGCGCGGAACGGGATGACTGATACCACACACCACAATGCCTAGCAT
ATCACCCACATTCTTGTATCAGAGTAGTGGTACCCAATTCCTCCCACATG
GTATGGGTTGACCCGGGCGAAGGTGTGTTCATTTGCCAAGTGAACCGTAG
TGCTACAGTGGGAATCAAACTCGGGTCTCCCAGACGGGAGTCAAGAGCGA
TGACTACTACAACACTACTCCTTAGCCGTTTTGAGATCCATTTTTAGCCA
ATTTTTATAGTATTTCTTGTAAAAATATTTTAACTGTTGCTGCTGTGCAT
GCCCACCTTTTACTCACTTTTTGCTGTGACAAGCAATTAGAATAGGCAGG
GTGAAAAGTGGACCGTCTAAACCAGAGCTACCTTAAGGGAAGAAATTTTC
GCGGAATTTCATTTCGCGGTTTACAGCTCAAAATTCGGTGCGGAATTTAA
TTTCGCGGTTGAGAGAAGTTTTTGTTCAACATTTTGCCCTAAAAAGTCTA
ACTTTAGAAAAAAAATTCTTGAAAATATTCGTGTTTAGGGTTTGTCAAAA
AACCTGAAAAAACCCTGAAATTAAATTCTTCCCTTAAGGTAATATACTTC
ATGATACTCTCTTGTTTTAGCGTTCGGTGTTTCACATCAAGGTGTTGAAA
AACTGCAACCAAAGGATGAAACTGTCCTCGTCCAAGGTACTTCATTGTTT
TTAAATGCAATTTCCCATTTGTTGTAGAAGGATCTCGATATTATTTCGTT
GATATCCTATTGATAACCCCAGAACTATAACAATTATCTTTTTCATTGTT
CTAGGTTGTGGGCCCATTGGATTGTATGCTGTCAGTTTATGTAAATACTT
TGGTGCCAAAAAGATGTTTGTTCATTCTTTTGATCATTTTAGTGTGACAA
TTCTCCCAAAAACTTTTCACCTTTCAGACAGATTATTTTGTTCCAAGATT
TACTTGCAGAACAAACAATTTCGAAATCTGTTAAATACTGATACATCGCG
TCAAAAATTCTGCTGTGTAATAAATAACATTGCTAACAGTTGCCAACAAG
TACAAAATTTAGATGCGTGCGTTCATGATACCTTTTTACTTTCTTTTGCA
TTAGAATTGCAACGGATATAGTAGAGGAACGCTTGCAACTAGCCAAACAA
CTTGGTGCCGATGTCTTGATCAACGGCTTAAATGAAGATTTGCCGAAGAA
AGGTTTTTATATTTTATCCCTTTCCAATTCTTTCAAAGTATTTTTCATTA
CGAATCAGAAAGGTTTGATTCGAGTAAAGAACCTTTTGGTAAAGCAAAAA
AATTGATAACCTTACCATTTAAATTGTAACTTGTTTTCATTTTCTAGTTA
TGGAGGAGACGAATAATGACGGAGTAGGTTGTCTTTTAGAAGCATCAGGA
GCTCAACCTCTTGTAAACAACTGCTTCCAAATGCTCAGGTAGAGTGATTT
GCTCATTCCATAGTAATTTTCACACTCCTTGTGTTTTCGCTCCACACCAG
TTTTCTCATAAGCTGGCTGCACAGCATGAGGGTTTTTTCACAGTCGACAC
TCCAAAATAACAAGAACTGCCTTCCTACCTACCTATGATTTTATCACATT
TTAAAAGCAGTGATCAAAGTTCTTCCGTCTCACACGGATTTCCGTCTCAC
TGAAATTGTTGTCAAAGTTTTCCGTCTCTGTTAGAAATGATTATTTAGCA
ACAAATAGTGATTTTATTCTCTAGAATAATTCCATCAGAAAGATATCTCG
TATTAAAACTGTTTTCTGGCTGATTTTACATTTTGGTCATGATTATTTTT
AAACCTTTTTAGATAAATGTGTATTTTTGCTGTATGATCGGCATTTTAAG
AACATTATGAGTTGTTTTAATTAACAAATTTTAGAGCCTTTCTAGCCAAT
CTAGGGGGTAAAAATTCTGAAAATTTTCTGGCCCTCGCCTCGGCCCCAAC
GGCCCCAATCATGGTGGGGCCTGCGGGTGTCACTGTGCCCCAAAATATCT
CTATTAAGAAATTTTCCGTCTCACAGAAAAAACTGCTTTGACCACTGTAA
AAGCGCCAAATATTTTAAATCGGGAAGTAAATGTAGAACAAATGAAACAA
GACGACTTAAAGTCGAAAATTTCGCATAATACTTGAACATCAACGACGAA
GACGCATGAAACGTGAGTCCTGCAGCATTATGCATTTTGAATGAAGCGCT
ACCACAGATATATAAGCCCGAAGGGCTAGATTTGCAACTTTAAGCTTTCT
CCAGCAAAAAAAGTGAAGCAAAAATTTGACTTTTTAAATTTCGTGCCGAT
GGATAGGATCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNAAAACCGGTGAAATTGCATATTTTAGTCACGTGACTCTGGTAGGAAA
TCCTTCCAAAGATGAGCTTCACTTTTTGAACAAAGCTGCAAATCTAGCCC
TTCGGGCTTTCCAGATATCTGTGAGCGCTACACGAGGTCATAGATACCCT
GTTTTTATGAAAAATCTTAATCCATTAAAAAAAGATTCCTTAAAAAATGC
GACTAAAGAATTCCATTCTATAAAGCGTAAACAAAATCTGCAATACAAAC
AAGAACTGCAATATACACTTGAGAAAAATAATTTTAAATTTTTTTGAAAA
TGAAGAAGAAAAAATGAACTTTTCATTCTTTGGTGCCAGAAACCTCATTT
TGTGCTTTGAAGGAACTTGTGATAAAGACTTCATTCACTTGCGCAAAGTT
TATATCAACTTCTTTCTATAAACAGTAGAATTTATCTAAAACTGAGAAAA
ATGGCTAGTCAGAAAAATCTGTTGTATACTACTTTCTGATATGAATGATG
GCCCACCACCATCAAAATCATTTGACTTTTCCTGAAAAAAAATTGAATAT
GGGGGGGGGGAGGATATAACATTTTTTGGAAATTTACCCCTCCCCCCTGG
ACATTGTGACTTTTGATCCCCCGGACAGCAGGTCTAACCCACCCCGCCCC
AGACATCAGTTGAGTAGTTGAGCTCCNNCTGGAACTTTTACTAACCAAAC
TCACCGAACACCAATCAAACTTCATTGGATAAAAAACTGTCATCATTAAC
GAGGGACCGCTGTACATTGTGCGGTGATGTACGGTGGGGCTGGATCTAAA
TGTGCTTTGTATGGCGGTGAAAATAGGTTAATTTGAAATCTGCTGTATTA
TCTGTACACCCACCTTACCTTACCTTACCTTAAATCACCGTACAATGACA
AAAGCTGGAACTTTTACTAACCAAACTCATCTAACACCAATCAAACTTCA
TCGGATAAAAAAACTGTCATCATTAACGAGGGACTGCTGTACATTGTGCG
GTGGTGTATGGTGGGCTGGATCTAAATGTCCTTTGTACGGCGGTGAAAAT
AGGTTAATTTGAAATCTGCTGTACTGTACACCCCACCTTACCCACCGTAA
ATCACCGTACAATGACAATGTACGGCAGTGTCTAGGCAGGGTCGTTTCGA
TTATACAAAAATGATTGCTGAATTTCAATTGACATGATTTCTAAGAAATA
CTGTGAGATCGGGTAACTTGCATAAGCCCTCAAATGAATGACCCATTCGG
TCATTAAAATACAAAGTTAAATCAAAACAAAAATGGTAGGTTAGAGCTGC
AAGCGGAGCTGCGTAGTTCATTTGTTTTGAAATTTTGCTGCTTTGATTGG
TCAGTCATTTGATGGCTATGCTATGCAAGTTACCCTNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNTACTTGCTAAAACTGACTGTTTGTCACAACTGGTTTCACTAT
TAACACATAACTATCTGGTGAAAAAAGGAAAAAAATATCATACCTATGTG
CTGTTTGTAGTTTTGGTGAAGAAGAGAAGAGAGGGTTAATGTTGTTGTTC
TGGAAAATTAACTCTTTTTGTACTACTTACTGAGTATGATCAATTTGTTG
GTGTATTCACTAACTACATAAAATACTTAGTATTAAACAAATATCAAACC
TCTTTAAATACTCTACAAAAGACCAGAAAATATGATAAAAATTTATACAG
CAGCAGCAAGTTTCAAAAGCATGTCTGATGTGCATAATCAAGCAGCCATT
AAAAAGTTTCACAATGATTGTTTACAAAGGCTTGGTTACACTTCTTGAAC
TAGTGTATTTTATTTATTAAGAAAAGCCCTGTTTTTTATCACTTTTTATC
TTTGTGAGTGAGTCCACCTTTAGAATATTGGCCGTAGTACGCCCGCAGCC
AAACGCCCACGCCATAATTTGCGCCCCAAAAAATGTCTCGCCACATACAT
ACACGGATGCCTATCGTAATACTTTCGCTATGCGAAATTAATAAGCAGGT
GGGTACTGGTGAATTTATTAACTACCTGGTGAACTAAAATGTTTCCGACT
CATAGTGTAGTGATTCAACTTTTAATACACTTTGTCTTTTCATAACTCTT
TTCTCGTTTTCAAAGTTTATGCTAACACAACTAATTCCCGATGGAATCTA
TTATTCAAAAATCAAAGAATGATTGGATGTCCCAAGAAGGATAATCGATA
TAGTAATTTCTTCAAGAAAGACAGGGGTTCTTCTTCACCTATTATATGAA
AGTGCCGCTGTTATTTAACATGCTAGAATTCATCCTTGGATCTTTCTTAC
ATTTTAGGAAGGGCGGAACAGTGGTATTGATAGGAGTACCAAAGGTAAGG
CGCCTTCATTTAGGTTTTTACAACTCGCCGACATCCCCTCGATCGAGGAA
TAAGTTCGATAGAAACCCTTACCTACCCTTGAGAATCGCAGGTGCAATTA
TATTTTTCTGGTTTTTAGAAAGCATTGTATGTGGAGAACGTCAACCGTGA
CATCCTGTTCAAATCATTGACCCTACACACTGTACATGGCCGAAAGATCT
TCCACACCTGGGAACATTGTGAACGAATATTGGCCGATGGAAAGTGAGAA
CATTTGTAGTTTTCAACTTCAGTTAAGCTACAGTCTGTGTGTCCTTTGAG
GGGGGGGGTACTTTTTCATTTTTTCATATACCAACTGTTGTGTCACGAAT
GAATGTGACGAATAGCTTCTTCTTATGAATTTTATGACAGGTAATTCCAT
TGCAGGGAATTCATTCTTCCTCAGAAAAGAGGAAAGATTGTCTTCGATTT
TGATAGCCCATTTATCAAATTGTAAAAAAATTACGGTATGGAGGAATCGA
TCATCATCCATATTTATTTATTTATAGAATTGATATTTCAGCCACCATTT
CTCATCGTTTCGGAATGTCTGAATGGGAACAGGTAGGTTAGGTAGCTAAC
TTACTTTGAAAAAGACATAATTTTCAATTTATACAGTTGTGTTTGCGAAT
GTTAATTATACTTTCTAGGTTACCCGGGAGCTGTAAACGATAGGCCTCCC
CATGTCAACACATAAGAGTGGGATGTTTACTGCATAGTCTTGTCATGGAG
AACTTTAATGGAAATCTAGTCACTTTAAATTTACTTATCTTTTTCTTCAG
GCATTTGAGGCGTTGATGTCAGGCAAGTGCTGCAAAATTATGATCGACCC
TCAAAGATAACGATTAACCTTTATACGAATTATACGAAGATTGGAAAGGT
GCTTATGTTCAGTTAAAATTTATTTCAATTTTTAGTACCCGTCAGTAGGT
CCTTAAAAATTTAGAGAACGCAAATTGTCCACGTAATTTTGAGGTAGTCT
TACGCAAATTCAAGCATAAATATTCTAAACATTAAATACGAAAACGAGGA
TAGTGG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_020714XLOC_020714Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00035440-exon-sc0001312-1575043694:60754..61132TCONS_00035440-exon-sc0001312-1575043694:60754..61132Clytia hemisphaericaexon
TCONS_00035440-exon-sc0001312-1575043694:60351..60406TCONS_00035440-exon-sc0001312-1575043694:60351..60406Clytia hemisphaericaexon
TCONS_00035440-exon-sc0001312-1575043694:59855..59957TCONS_00035440-exon-sc0001312-1575043694:59855..59957Clytia hemisphaericaexon
TCONS_00035440-exon-sc0001312-1575043694:59610..59672TCONS_00035440-exon-sc0001312-1575043694:59610..59672Clytia hemisphaericaexon
TCONS_00035440-exon-sc0001312-1575043694:59240..59326TCONS_00035440-exon-sc0001312-1575043694:59240..59326Clytia hemisphaericaexon
TCONS_00035440-exon-sc0001312-1575043694:54397..54462TCONS_00035440-exon-sc0001312-1575043694:54397..54462Clytia hemisphaericaexon
TCONS_00035440-exon-sc0001312-1575043694:54243..54278TCONS_00035440-exon-sc0001312-1575043694:54243..54278Clytia hemisphaericaexon
TCONS_00035440-exon-sc0001312-1575043694:53645..53735TCONS_00035440-exon-sc0001312-1575043694:53645..53735Clytia hemisphaericaexon
TCONS_00035440-exon-sc0001312-1575043694:50089..50125TCONS_00035440-exon-sc0001312-1575043694:50089..50125Clytia hemisphaericaexon
TCONS_00035440-exon-sc0001312-1575043694:49840..49964TCONS_00035440-exon-sc0001312-1575043694:49840..49964Clytia hemisphaericaexon
TCONS_00035440-exon-sc0001312-1575043694:49501..49555TCONS_00035440-exon-sc0001312-1575043694:49501..49555Clytia hemisphaericaexon
TCONS_00035440-exon-sc0001312-1575043694:49027..49282TCONS_00035440-exon-sc0001312-1575043694:49027..49282Clytia hemisphaericaexon
TCONS_00035440-exon-sc0001312-1510915933:60754..61132TCONS_00035440-exon-sc0001312-1510915933:60754..61132Clytia hemisphaericaexon
TCONS_00035440-exon-sc0001312-1510915933:60351..60406TCONS_00035440-exon-sc0001312-1510915933:60351..60406Clytia hemisphaericaexon
TCONS_00035440-exon-sc0001312-1510915933:59855..59957TCONS_00035440-exon-sc0001312-1510915933:59855..59957Clytia hemisphaericaexon
TCONS_00035440-exon-sc0001312-1510915933:59610..59672TCONS_00035440-exon-sc0001312-1510915933:59610..59672Clytia hemisphaericaexon
TCONS_00035440-exon-sc0001312-1510915933:59240..59326TCONS_00035440-exon-sc0001312-1510915933:59240..59326Clytia hemisphaericaexon
TCONS_00035440-exon-sc0001312-1510915933:54397..54462TCONS_00035440-exon-sc0001312-1510915933:54397..54462Clytia hemisphaericaexon
TCONS_00035440-exon-sc0001312-1510915933:54243..54278TCONS_00035440-exon-sc0001312-1510915933:54243..54278Clytia hemisphaericaexon
TCONS_00035440-exon-sc0001312-1510915933:53645..53735TCONS_00035440-exon-sc0001312-1510915933:53645..53735Clytia hemisphaericaexon
TCONS_00035440-exon-sc0001312-1510915933:50089..50125TCONS_00035440-exon-sc0001312-1510915933:50089..50125Clytia hemisphaericaexon
TCONS_00035440-exon-sc0001312-1510915933:49840..49964TCONS_00035440-exon-sc0001312-1510915933:49840..49964Clytia hemisphaericaexon
TCONS_00035440-exon-sc0001312-1510915933:49501..49555TCONS_00035440-exon-sc0001312-1510915933:49501..49555Clytia hemisphaericaexon
TCONS_00035440-exon-sc0001312-1510915933:49027..49282TCONS_00035440-exon-sc0001312-1510915933:49027..49282Clytia hemisphaericaexon
TCONS_00035440-exon-sc0001312-1491911889:60754..61132TCONS_00035440-exon-sc0001312-1491911889:60754..61132Clytia hemisphaericaexon
TCONS_00035440-exon-sc0001312-1491911889:60351..60406TCONS_00035440-exon-sc0001312-1491911889:60351..60406Clytia hemisphaericaexon
TCONS_00035440-exon-sc0001312-1491911889:59855..59957TCONS_00035440-exon-sc0001312-1491911889:59855..59957Clytia hemisphaericaexon
TCONS_00035440-exon-sc0001312-1491911889:59610..59672TCONS_00035440-exon-sc0001312-1491911889:59610..59672Clytia hemisphaericaexon
TCONS_00035440-exon-sc0001312-1491911889:59240..59326TCONS_00035440-exon-sc0001312-1491911889:59240..59326Clytia hemisphaericaexon
TCONS_00035440-exon-sc0001312-1491911889:54397..54462TCONS_00035440-exon-sc0001312-1491911889:54397..54462Clytia hemisphaericaexon
TCONS_00035440-exon-sc0001312-1491911889:54243..54278TCONS_00035440-exon-sc0001312-1491911889:54243..54278Clytia hemisphaericaexon
TCONS_00035440-exon-sc0001312-1491911889:53645..53735TCONS_00035440-exon-sc0001312-1491911889:53645..53735Clytia hemisphaericaexon
TCONS_00035440-exon-sc0001312-1491911889:50089..50125TCONS_00035440-exon-sc0001312-1491911889:50089..50125Clytia hemisphaericaexon
TCONS_00035440-exon-sc0001312-1491911889:49840..49964TCONS_00035440-exon-sc0001312-1491911889:49840..49964Clytia hemisphaericaexon
TCONS_00035440-exon-sc0001312-1491911889:49501..49555TCONS_00035440-exon-sc0001312-1491911889:49501..49555Clytia hemisphaericaexon
TCONS_00035440-exon-sc0001312-1491911889:49027..49282TCONS_00035440-exon-sc0001312-1491911889:49027..49282Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0001312supercontigsc0001312:49027..61132 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
2.01372	3.33896	1.79278	1.63463	0.397433	0.818086	1.02892	1.36898	0	0	0.240267	0	0.467953	0.854118	0.919919	2.00152	1.35476	2.04801	0	0	1.66874	1.29728	0.653718	1.57863	4.11293	2.10435	1.56466	0	0.719025	0
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00035440 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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