TCONS_00035439 (transcript) - C. hemisphaerica

Overview
NameTCONS_00035439
Unique NameTCONS_00035439
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1286

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00035439 ID=TCONS_00035439|Name=TCONS_00035439|organism=Clytia hemisphaerica|type=transcript|length=1286bp
CATAGTGAAGagtaaagaaaaagaatttaacTGAAAGTAAAGACAAAAAG
ATGGCTGGCGACAAGATGAAATGTTTAATGAAAGAGAAGGAAGAACCAGG
ATACACCTTAAAAGAAATTGATGTACCCATCCCTCAAGAAGGAGAACTCT
TGGTCAAATGTCTCAAATCATCCATCTGTGGATCTGATATCAACTTGTTC
GTTTGGAATGATAttgCTCGAAATATCGCAACAGTACCTTTCATCCCCGG
TCACGAAGGAGTCAGTGAGATCGTGAAAGTTGGTGCAGGCTGCCCTGAAG
AGTACAAAGTTGGATTGACAGTGTGTTGTGAAAACCATTTTTACTGTGGA
ACCTGCTATCAATGCTTACATAACCAACAGCACATTTGTCAGAACCTCAG
TCAATATGGTCACGGTAAAGGAACTATACACGGCGGTTTTTCGGAATACT
CAATTATTCCGACAAGATATGCTTACATCCTGAAAAGAAACTTGGATCCG
GAGATCGCATGCTTGTTAGAACCGTTCGGTGTTTCACATCAAGGTGTTGA
AAAACTGCAACCAAAGGATGAAACTGTCCTCGTCCAAGGTTGTGGGCCCA
TTGGATTGTATGCTGTCAGTTTATAATTGCAACGGATATAGTAGAGGAAC
GCTTGCAACTAGCCAAACAACTTGGTGCCGATGTCTTGATCAACGGCTTA
AATGAAGATTTGCCGAAGAAAGtTATGGAGGAGACGAATAATGACGGAGT
AGGTTGTCTTTTAGAAGCATCAGGAGCTCAACCTCTTGTAAACAACTGCT
TCCAAATGCTCAGGAAGGGCGGAACAGTGGTATTGATAGGAGTACCAAAG
AAAGCATTGTATGTGGAGAACGTCAACCGTGACATCCTGTTCAAATCATT
GACCCTACACACTGTACATGGCCGAAAGATCTTCCACACCTGGGAACATT
GTGAACGAATATTGGCCGATGGAAAaatTGATATTTCAGCCACCATTTCT
CATCGTTTCGGAATGTCTGAATGGGAACAGGCATTTGAGGCGTTGATGTC
AGGCAAGTGCTGCAAAATTATGATCGACCCTCAAAGATAACGATTAACCT
TTATACGAATTATACGAAGATTGGAAAGGTGCTTATGTTCagttaaaatt
tatttcaatttttagtaCCCGTCAGTAGGTCCTTAAAAATTTAGAGAACG
CAAATTGTCCACGTAATTTTGAGGTAGTCTTACGCAAATTCAAGCATAAA
TATTCTAAACATTAAATACGAAAACGAGGATAGTGG
Run BLAST on NCBI

transcript from alignment at sc0001312:49027..60966-

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00035439 ID=TCONS_00035439|Name=TCONS_00035439|organism=Clytia hemisphaerica|type=transcript|length=11940bp|location=Sequence derived from alignment at sc0001312:49027..60966- (Clytia hemisphaerica)
CATAGTGAAGAGTAAAGAAAAAGAATTTAACTGAAAGTAAAGACAAAAAG
ATGGCTGGCGACAAGATGAAATGTTTAATGAAAGAGAAGGAAGAACCAGG
ATACACCTTAAAAGAAATTGATGTACCCATCCCTCAAGAAGGAGAACTCT
TGGTCAAATGTCTCAAATCATCCATCTGTGGATCTGATATCAACTTGTTC
GTTTGGAATGATAGTCAGTTGCTGCTTTATCATCTCATACTATATCAGTT
TTAAATCAATAATTGCCAAGAAATCTACCTTATTACACGTGAATCGGTTA
CCCTTGCTTTAATTACAATCGTTTAACAAAATTTGAGCCGTGGTAATTTT
CGAAAACCCTGTCTTTCACGTTAATAAATTGTCACATTTCACTCATTTTT
CCCGCGTTAAATACTTGCTTAGTTATATAAGTGTAATAAGGTATTTGAAA
ATGATGACGTTATCATACATCTTTATATTAATTAGTAAAAACTCTACTCG
AAGAATTTAGTATGGTGCTAGCTGCCTATAAACATTCTTCCTGTTTTTCA
TTTTTTTCAGTTGCTCGAAATATCGCAACAGTACCTTTCATCCCCGGTCA
CGAAGGAGTCAGTGAGGTAATATTGAAGCCGTAAGGACTAGGGATGTGTG
CATTGCAATGGTACACTTAGATTTTCTTATTATTTAACGATTCACCCAAG
ACATCTATTCAAAGATTTATAATCTTTAACATGAAATTTTGATAGGGTGC
CTCCTCTTTCTTCTATATAAAGGTTGAGTGCTTGGGTCATATCCTATACA
TCAATACCGATATTATGTACCGAGGTATGAGTGTTTTTCTGCGACGGAGA
CGGTAAGGTTCTAATTTGACTAGATCATGTCCAACTGGGGACGACGATAA
ATCAGCACTTTTACCGTCCTCGATTTTGAGCATCAGAACTGCGTCTTCAA
AAACTTGTACAAATACTCACTAAAACTTTTAACTCGACTGTTTATTCTTT
TACTTCTAGATCGTGAAAGTTGGTGCAGGCTGCCCTGAAGAGTACAAAGT
TGGATTGACAGTGTGTTGTGAAAACCATTTTTACTGTGGAACCTGCTATC
AATGCTTACATAGTAAGACGTGTTCCGTTCTATTCATTCTATAAAAAGCT
TTATTTTTATTTTTGGTGGTTGTATGACACCTTTTTTGGGAAAACAGAAA
TAGAAATAATGTTGATTCCAGAAATGTGAGTGTTATACGACATTGTATAT
CTTCTATAATTTCCATAACATTTGGTATCTACCTATTTCCATAGACCAAC
AGCACATTTGTCAGAACCTCAGTCAATATGGTCACGGTAAAGGAACTATA
CACGGCGGTAAGTCAGACAGAAAATAAATCATCTTTCAACTCTCCTTCCA
TTCGTTCAATCGAGCAAATCCTCTCCTCAAAGGTTTGCTATTTGTCCTTT
GTTTGTTTTTTTAATTCAAGTTCTGAAAGATTTGAGATGTTTTTACGCTG
AAAACACAATTCTGATCATTTCCCGAGTTTTTTGTCGCGAAAAGCGAAAA
TCTCATAAAAATCAATACTATCAATGTTTTGGAGACAGGTTGAATTGAGC
TATTAATGTTATGAAATATAACTTGTTCACTTTGGTGCAGGTTTTTCGGA
ATACTCAATTATTCCGACAAGATATGCTTACATCCTGAAAAGAAACTTGG
ATCCGGAGATCGCATGCTTGTTAGAACGTAAGAAATAATTTTAATCCTGT
CGTACTCTAATCAATAAAATACCGCGTGGTTTGAATGGAAATGAAATATG
CTTTCAGCTCAAACTAATTTTATTAAGAGTCTCAATTTAATGAGTTTTGA
CTGCAAAAGACTATAACTTTTAATTTACAAAGTTAAAATTCAAAAAGCTC
AGGAGGTTGTCAATCATCTAAAGTATTCCCGAGTCAGCCGGTATTATAAT
TGGTGTCTTAAACTCTGGTTTGGACGACCCACTTTGTGCGCCATGCCTAT
TCTAATTGTGAATTAAATTTGGCGGCGAGTGGGCAGAAAGCTGTCTAAAG
CGAAATATTATAGTCGACACGGTCCGGCTTTCTTTTTATTCCAATCGAAT
TGTTTCGTCGATCATAATCAAGAAAATGGGCAGAAAGCGGATTCTCTTTC
GAAAGCCGATTTGATGATATAGTCCGGGAGCCAAACCCAAAAAATGGCAT
TTTGCTTAAACCAAGATTCTAAAGGATAAAGTATACATTTTTGGAATCCT
CAACTATCCTAGTTTTGGAAATGGTCGGTCCCCAAAGCTAACTCCTGGTC
AATTTTTCATACTGGGCCCGAGTTTAGGGGGTACTTTTTACCCTTTGTAA
GGATTTGTTAAGGAAAATGCCATTCCAGGGGTGATATAATTTGATGTATC
TAGTCAATCAGTTGACCAATTGCTTTGAAACTTTGCAAAAAGTTTCAAGG
TAGGCTGATGATTGTTTTCGGCAAAAAATTTTTGTGAAAAATTATTTTTA
TAGGTTTGCCTGGGGAAAAAAAGGGAAAATTTGGGTATTTTAACTAAATT
TTGACCCTTTATAAGTCTGGGACCTACCCAAACAACTTTTAATGAGACAC
AAACTAGGTGTTATGATAGACTTTAATGCAATACATCAGAAAAATTTCAA
ACAGACAGTATTTAGTATTATTTCAGGGCTGCAGGGGGTAAAATTGCCCA
TTTTTATGGGTTTTTACCTTATTTGAGNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNATCAGGGGGTAAATACACCACTTCTTGGTAGTTGTTGCCTGAATTTGG
ATGTTTTTATTGTATGGTAGCCTCAAATTTATGAAATTTTGAGATGGAAA
CCAGTTATTTACCCTTCAGTCATTTTTTAGTATTTTTGTTGACAACCTAC
TCAAATGATGACGGATTTAAAACTTAAGTTATGGCCAAATGATAACATTT
ATTTGACGTAATTTTGTCAGTTTTTGCTTTGAGATTCCACTATATTGCTA
TTCAGAGCTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNGCAAAAATGATCAGTCAAATTATGAGTATGTAGTACATTA
TGAGTATGCAGAGGACCGTTAGTTTTGTTTTCACAAAACGATTAGAAATT
TTTCATCAAAGCAGGCCTTAACATTGACACAGCACTTTTATTTCTACCCA
AGTTAACAATATTTTACAAATTATTAGGCTCCAAATAACTATTCTACTTA
AAAACCAGTACAGGGACCATTTTTGGAAGNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNGGAAGCTCTGAATAGCAATATAGTGGAATTTCAAAGC
AAAAACTGACAAAATTACGTCAAAAAATGTTATAATTTGGCCATAACTTA
AGTTAAATCCCTCATTATTTTGTGTAGATTGTCAACAAAAGTACTAAAAA
ATGACTGAAGGGTATATAACTGGTTTCCATCTCAAAATTTCATAAATTTG
AGGCTACCATACAATAAAGACATCCAAATTCAGGCAACAACTACCAAGAA
GTGGTGTATTTACCCCCTGATTTGCCCACAGTGACCCTGATTACAGACAA
TGAAAACCACAAATAACTTTCNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCTCAAATAAGGT
AAAAACCCATAAAAATGGGCAATTTTACCCCCTGCAGCCCTGAAATAATA
CTAAATACTGTCTGTTTGAAATTTTTCTGATGTATTGCATTAAAGTCTAT
CATAACACCTAGTTTGTGTCTCATTAAAAGTTGTTTGGGTAGGTCCCAGA
CTTATAAAGGGTCAAAATTTAGTTAAAATACCCAAATTTTCCCTTTTTTT
CCCCAGGCAAACCTATAAAAATAATTTTTCACAAAAATTTTTTGCCGAAA
ACAATCATCAGCCTACCTTGAAACTTTTTGCAAAGTTTCAAAGCAATTGG
TCAACTGATTGAATAGATACAGCAAATCATATCACCCCTGGAATGGCATT
TTCCTTAACAAATCCTTACAAAGGGTAAAAAGTACCCCCTAAACTCGGGC
CCAGTATGAAAAATTGACCAGGAGTTAGCTTTGGGGACCGACCATTTCCA
AAACTAGGATAGTTGAGGATTCTAAAAATGTATAGTTTATCCTGTAGAAT
CTTGGGTTAAGCAAAAGTGTTATTTAAGGAGATATAGGATTTGACTCCCG
GACTAATATGAGCCCTCCCCACTGGGGAATGGGTCCTACTCCTTGCGAAG
TAGGAATTCCTCCTCTTTCGATTTGGAACGCATAGCGCTGTCCAGACACC
GCTGTGCACGCGAGACTCGCGAGACATAGATACCATGATGCATAGTGATG
ACACTCGAACCACGCGGGAGAGCATATAGCTCGTCGCAGGCGCGGAACGG
GATGACTGATACCACACACCACAATGCCTAGCATATCACCCACATTCTTG
TATCAGAGTAGTGGTACCCAATTCCTCCCACATGGTATGGGTTGACCCGG
GCGAAGGTGTGTTCATTTGCCAAGTGAACCGTAGTGCTACAGTGGGAATC
AAACTCGGGTCTCCCAGACGGGAGTCAAGAGCGATGACTACTACAACACT
ACTCCTTAGCCGTTTTGAGATCCATTTTTAGCCAATTTTTATAGTATTTC
TTGTAAAAATATTTTAACTGTTGCTGCTGTGCATGCCCACCTTTTACTCA
CTTTTTGCTGTGACAAGCAATTAGAATAGGCAGGGTGAAAAGTGGACCGT
CTAAACCAGAGCTACCTTAAGGGAAGAAATTTTCGCGGAATTTCATTTCG
CGGTTTACAGCTCAAAATTCGGTGCGGAATTTAATTTCGCGGTTGAGAGA
AGTTTTTGTTCAACATTTTGCCCTAAAAAGTCTAACTTTAGAAAAAAAAT
TCTTGAAAATATTCGTGTTTAGGGTTTGTCAAAAAACCTGAAAAAACCCT
GAAATTAAATTCTTCCCTTAAGGTAATATACTTCATGATACTCTCTTGTT
TTAGCGTTCGGTGTTTCACATCAAGGTGTTGAAAAACTGCAACCAAAGGA
TGAAACTGTCCTCGTCCAAGGTACTTCATTGTTTTTAAATGCAATTTCCC
ATTTGTTGTAGAAGGATCTCGATATTATTTCGTTGATATCCTATTGATAA
CCCCAGAACTATAACAATTATCTTTTTCATTGTTCTAGGTTGTGGGCCCA
TTGGATTGTATGCTGTCAGTTTATGTAAATACTTTGGTGCCAAAAAGATG
TTTGTTCATTCTTTTGATCATTTTAGTGTGACAATTCTCCCAAAAACTTT
TCACCTTTCAGACAGATTATTTTGTTCCAAGATTTACTTGCAGAACAAAC
AATTTCGAAATCTGTTAAATACTGATACATCGCGTCAAAAATTCTGCTGT
GTAATAAATAACATTGCTAACAGTTGCCAACAAGTACAAAATTTAGATGC
GTGCGTTCATGATACCTTTTTACTTTCTTTTGCATTAGAATTGCAACGGA
TATAGTAGAGGAACGCTTGCAACTAGCCAAACAACTTGGTGCCGATGTCT
TGATCAACGGCTTAAATGAAGATTTGCCGAAGAAAGGTTTTTATATTTTA
TCCCTTTCCAATTCTTTCAAAGTATTTTTCATTACGAATCAGAAAGGTTT
GATTCGAGTAAAGAACCTTTTGGTAAAGCAAAAAAATTGATAACCTTACC
ATTTAAATTGTAACTTGTTTTCATTTTCTAGTTATGGAGGAGACGAATAA
TGACGGAGTAGGTTGTCTTTTAGAAGCATCAGGAGCTCAACCTCTTGTAA
ACAACTGCTTCCAAATGCTCAGGTAGAGTGATTTGCTCATTCCATAGTAA
TTTTCACACTCCTTGTGTTTTCGCTCCACACCAGTTTTCTCATAAGCTGG
CTGCACAGCATGAGGGTTTTTTCACAGTCGACACTCCAAAATAACAAGAA
CTGCCTTCCTACCTACCTATGATTTTATCACATTTTAAAAGCAGTGATCA
AAGTTCTTCCGTCTCACACGGATTTCCGTCTCACTGAAATTGTTGTCAAA
GTTTTCCGTCTCTGTTAGAAATGATTATTTAGCAACAAATAGTGATTTTA
TTCTCTAGAATAATTCCATCAGAAAGATATCTCGTATTAAAACTGTTTTC
TGGCTGATTTTACATTTTGGTCATGATTATTTTTAAACCTTTTTAGATAA
ATGTGTATTTTTGCTGTATGATCGGCATTTTAAGAACATTATGAGTTGTT
TTAATTAACAAATTTTAGAGCCTTTCTAGCCAATCTAGGGGGTAAAAATT
CTGAAAATTTTCTGGCCCTCGCCTCGGCCCCAACGGCCCCAATCATGGTG
GGGCCTGCGGGTGTCACTGTGCCCCAAAATATCTCTATTAAGAAATTTTC
CGTCTCACAGAAAAAACTGCTTTGACCACTGTAAAAGCGCCAAATATTTT
AAATCGGGAAGTAAATGTAGAACAAATGAAACAAGACGACTTAAAGTCGA
AAATTTCGCATAATACTTGAACATCAACGACGAAGACGCATGAAACGTGA
GTCCTGCAGCATTATGCATTTTGAATGAAGCGCTACCACAGATATATAAG
CCCGAAGGGCTAGATTTGCAACTTTAAGCTTTCTCCAGCAAAAAAAGTGA
AGCAAAAATTTGACTTTTTAAATTTCGTGCCGATGGATAGGATCNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAAAACCGGTGAAA
TTGCATATTTTAGTCACGTGACTCTGGTAGGAAATCCTTCCAAAGATGAG
CTTCACTTTTTGAACAAAGCTGCAAATCTAGCCCTTCGGGCTTTCCAGAT
ATCTGTGAGCGCTACACGAGGTCATAGATACCCTGTTTTTATGAAAAATC
TTAATCCATTAAAAAAAGATTCCTTAAAAAATGCGACTAAAGAATTCCAT
TCTATAAAGCGTAAACAAAATCTGCAATACAAACAAGAACTGCAATATAC
ACTTGAGAAAAATAATTTTAAATTTTTTTGAAAATGAAGAAGAAAAAATG
AACTTTTCATTCTTTGGTGCCAGAAACCTCATTTTGTGCTTTGAAGGAAC
TTGTGATAAAGACTTCATTCACTTGCGCAAAGTTTATATCAACTTCTTTC
TATAAACAGTAGAATTTATCTAAAACTGAGAAAAATGGCTAGTCAGAAAA
ATCTGTTGTATACTACTTTCTGATATGAATGATGGCCCACCACCATCAAA
ATCATTTGACTTTTCCTGAAAAAAAATTGAATATGGGGGGGGGGAGGATA
TAACATTTTTTGGAAATTTACCCCTCCCCCCTGGACATTGTGACTTTTGA
TCCCCCGGACAGCAGGTCTAACCCACCCCGCCCCAGACATCAGTTGAGTA
GTTGAGCTCCNNCTGGAACTTTTACTAACCAAACTCACCGAACACCAATC
AAACTTCATTGGATAAAAAACTGTCATCATTAACGAGGGACCGCTGTACA
TTGTGCGGTGATGTACGGTGGGGCTGGATCTAAATGTGCTTTGTATGGCG
GTGAAAATAGGTTAATTTGAAATCTGCTGTATTATCTGTACACCCACCTT
ACCTTACCTTACCTTAAATCACCGTACAATGACAAAAGCTGGAACTTTTA
CTAACCAAACTCATCTAACACCAATCAAACTTCATCGGATAAAAAAACTG
TCATCATTAACGAGGGACTGCTGTACATTGTGCGGTGGTGTATGGTGGGC
TGGATCTAAATGTCCTTTGTACGGCGGTGAAAATAGGTTAATTTGAAATC
TGCTGTACTGTACACCCCACCTTACCCACCGTAAATCACCGTACAATGAC
AATGTACGGCAGTGTCTAGGCAGGGTCGTTTCGATTATACAAAAATGATT
GCTGAATTTCAATTGACATGATTTCTAAGAAATACTGTGAGATCGGGTAA
CTTGCATAAGCCCTCAAATGAATGACCCATTCGGTCATTAAAATACAAAG
TTAAATCAAAACAAAAATGGTAGGTTAGAGCTGCAAGCGGAGCTGCGTAG
TTCATTTGTTTTGAAATTTTGCTGCTTTGATTGGTCAGTCATTTGATGGC
TATGCTATGCAAGTTACCCTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTACTTGCT
AAAACTGACTGTTTGTCACAACTGGTTTCACTATTAACACATAACTATCT
GGTGAAAAAAGGAAAAAAATATCATACCTATGTGCTGTTTGTAGTTTTGG
TGAAGAAGAGAAGAGAGGGTTAATGTTGTTGTTCTGGAAAATTAACTCTT
TTTGTACTACTTACTGAGTATGATCAATTTGTTGGTGTATTCACTAACTA
CATAAAATACTTAGTATTAAACAAATATCAAACCTCTTTAAATACTCTAC
AAAAGACCAGAAAATATGATAAAAATTTATACAGCAGCAGCAAGTTTCAA
AAGCATGTCTGATGTGCATAATCAAGCAGCCATTAAAAAGTTTCACAATG
ATTGTTTACAAAGGCTTGGTTACACTTCTTGAACTAGTGTATTTTATTTA
TTAAGAAAAGCCCTGTTTTTTATCACTTTTTATCTTTGTGAGTGAGTCCA
CCTTTAGAATATTGGCCGTAGTACGCCCGCAGCCAAACGCCCACGCCATA
ATTTGCGCCCCAAAAAATGTCTCGCCACATACATACACGGATGCCTATCG
TAATACTTTCGCTATGCGAAATTAATAAGCAGGTGGGTACTGGTGAATTT
ATTAACTACCTGGTGAACTAAAATGTTTCCGACTCATAGTGTAGTGATTC
AACTTTTAATACACTTTGTCTTTTCATAACTCTTTTCTCGTTTTCAAAGT
TTATGCTAACACAACTAATTCCCGATGGAATCTATTATTCAAAAATCAAA
GAATGATTGGATGTCCCAAGAAGGATAATCGATATAGTAATTTCTTCAAG
AAAGACAGGGGTTCTTCTTCACCTATTATATGAAAGTGCCGCTGTTATTT
AACATGCTAGAATTCATCCTTGGATCTTTCTTACATTTTAGGAAGGGCGG
AACAGTGGTATTGATAGGAGTACCAAAGGTAAGGCGCCTTCATTTAGGTT
TTTACAACTCGCCGACATCCCCTCGATCGAGGAATAAGTTCGATAGAAAC
CCTTACCTACCCTTGAGAATCGCAGGTGCAATTATATTTTTCTGGTTTTT
AGAAAGCATTGTATGTGGAGAACGTCAACCGTGACATCCTGTTCAAATCA
TTGACCCTACACACTGTACATGGCCGAAAGATCTTCCACACCTGGGAACA
TTGTGAACGAATATTGGCCGATGGAAAGTGAGAACATTTGTAGTTTTCAA
CTTCAGTTAAGCTACAGTCTGTGTGTCCTTTGAGGGGGGGGGTACTTTTT
CATTTTTTCATATACCAACTGTTGTGTCACGAATGAATGTGACGAATAGC
TTCTTCTTATGAATTTTATGACAGGTAATTCCATTGCAGGGAATTCATTC
TTCCTCAGAAAAGAGGAAAGATTGTCTTCGATTTTGATAGCCCATTTATC
AAATTGTAAAAAAATTACGGTATGGAGGAATCGATCATCATCCATATTTA
TTTATTTATAGAATTGATATTTCAGCCACCATTTCTCATCGTTTCGGAAT
GTCTGAATGGGAACAGGTAGGTTAGGTAGCTAACTTACTTTGAAAAAGAC
ATAATTTTCAATTTATACAGTTGTGTTTGCGAATGTTAATTATACTTTCT
AGGTTACCCGGGAGCTGTAAACGATAGGCCTCCCCATGTCAACACATAAG
AGTGGGATGTTTACTGCATAGTCTTGTCATGGAGAACTTTAATGGAAATC
TAGTCACTTTAAATTTACTTATCTTTTTCTTCAGGCATTTGAGGCGTTGA
TGTCAGGCAAGTGCTGCAAAATTATGATCGACCCTCAAAGATAACGATTA
ACCTTTATACGAATTATACGAAGATTGGAAAGGTGCTTATGTTCAGTTAA
AATTTATTTCAATTTTTAGTACCCGTCAGTAGGTCCTTAAAAATTTAGAG
AACGCAAATTGTCCACGTAATTTTGAGGTAGTCTTACGCAAATTCAAGCA
TAAATATTCTAAACATTAAATACGAAAACGAGGATAGTGG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_020714XLOC_020714Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00035439-exon-sc0001312-1575043694:60754..60966TCONS_00035439-exon-sc0001312-1575043694:60754..60966Clytia hemisphaericaexon
TCONS_00035439-exon-sc0001312-1575043694:60351..60406TCONS_00035439-exon-sc0001312-1575043694:60351..60406Clytia hemisphaericaexon
TCONS_00035439-exon-sc0001312-1575043694:59855..59957TCONS_00035439-exon-sc0001312-1575043694:59855..59957Clytia hemisphaericaexon
TCONS_00035439-exon-sc0001312-1575043694:59610..59672TCONS_00035439-exon-sc0001312-1575043694:59610..59672Clytia hemisphaericaexon
TCONS_00035439-exon-sc0001312-1575043694:59240..59326TCONS_00035439-exon-sc0001312-1575043694:59240..59326Clytia hemisphaericaexon
TCONS_00035439-exon-sc0001312-1575043694:54397..54462TCONS_00035439-exon-sc0001312-1575043694:54397..54462Clytia hemisphaericaexon
TCONS_00035439-exon-sc0001312-1575043694:54243..54278TCONS_00035439-exon-sc0001312-1575043694:54243..54278Clytia hemisphaericaexon
TCONS_00035439-exon-sc0001312-1575043694:53881..53978TCONS_00035439-exon-sc0001312-1575043694:53881..53978Clytia hemisphaericaexon
TCONS_00035439-exon-sc0001312-1575043694:53645..53735TCONS_00035439-exon-sc0001312-1575043694:53645..53735Clytia hemisphaericaexon
TCONS_00035439-exon-sc0001312-1575043694:50089..50125TCONS_00035439-exon-sc0001312-1575043694:50089..50125Clytia hemisphaericaexon
TCONS_00035439-exon-sc0001312-1575043694:49840..49964TCONS_00035439-exon-sc0001312-1575043694:49840..49964Clytia hemisphaericaexon
TCONS_00035439-exon-sc0001312-1575043694:49501..49555TCONS_00035439-exon-sc0001312-1575043694:49501..49555Clytia hemisphaericaexon
TCONS_00035439-exon-sc0001312-1575043694:49027..49282TCONS_00035439-exon-sc0001312-1575043694:49027..49282Clytia hemisphaericaexon
TCONS_00035439-exon-sc0001312-1510915933:60754..60966TCONS_00035439-exon-sc0001312-1510915933:60754..60966Clytia hemisphaericaexon
TCONS_00035439-exon-sc0001312-1510915933:60351..60406TCONS_00035439-exon-sc0001312-1510915933:60351..60406Clytia hemisphaericaexon
TCONS_00035439-exon-sc0001312-1510915933:59855..59957TCONS_00035439-exon-sc0001312-1510915933:59855..59957Clytia hemisphaericaexon
TCONS_00035439-exon-sc0001312-1510915933:59610..59672TCONS_00035439-exon-sc0001312-1510915933:59610..59672Clytia hemisphaericaexon
TCONS_00035439-exon-sc0001312-1510915933:59240..59326TCONS_00035439-exon-sc0001312-1510915933:59240..59326Clytia hemisphaericaexon
TCONS_00035439-exon-sc0001312-1510915933:54397..54462TCONS_00035439-exon-sc0001312-1510915933:54397..54462Clytia hemisphaericaexon
TCONS_00035439-exon-sc0001312-1510915933:54243..54278TCONS_00035439-exon-sc0001312-1510915933:54243..54278Clytia hemisphaericaexon
TCONS_00035439-exon-sc0001312-1510915933:53881..53978TCONS_00035439-exon-sc0001312-1510915933:53881..53978Clytia hemisphaericaexon
TCONS_00035439-exon-sc0001312-1510915933:53645..53735TCONS_00035439-exon-sc0001312-1510915933:53645..53735Clytia hemisphaericaexon
TCONS_00035439-exon-sc0001312-1510915933:50089..50125TCONS_00035439-exon-sc0001312-1510915933:50089..50125Clytia hemisphaericaexon
TCONS_00035439-exon-sc0001312-1510915933:49840..49964TCONS_00035439-exon-sc0001312-1510915933:49840..49964Clytia hemisphaericaexon
TCONS_00035439-exon-sc0001312-1510915933:49501..49555TCONS_00035439-exon-sc0001312-1510915933:49501..49555Clytia hemisphaericaexon
TCONS_00035439-exon-sc0001312-1510915933:49027..49282TCONS_00035439-exon-sc0001312-1510915933:49027..49282Clytia hemisphaericaexon
TCONS_00035439-exon-sc0001312-1491911889:60754..60966TCONS_00035439-exon-sc0001312-1491911889:60754..60966Clytia hemisphaericaexon
TCONS_00035439-exon-sc0001312-1491911889:60351..60406TCONS_00035439-exon-sc0001312-1491911889:60351..60406Clytia hemisphaericaexon
TCONS_00035439-exon-sc0001312-1491911889:59855..59957TCONS_00035439-exon-sc0001312-1491911889:59855..59957Clytia hemisphaericaexon
TCONS_00035439-exon-sc0001312-1491911889:59610..59672TCONS_00035439-exon-sc0001312-1491911889:59610..59672Clytia hemisphaericaexon
TCONS_00035439-exon-sc0001312-1491911889:59240..59326TCONS_00035439-exon-sc0001312-1491911889:59240..59326Clytia hemisphaericaexon
TCONS_00035439-exon-sc0001312-1491911889:54397..54462TCONS_00035439-exon-sc0001312-1491911889:54397..54462Clytia hemisphaericaexon
TCONS_00035439-exon-sc0001312-1491911889:54243..54278TCONS_00035439-exon-sc0001312-1491911889:54243..54278Clytia hemisphaericaexon
TCONS_00035439-exon-sc0001312-1491911889:53881..53978TCONS_00035439-exon-sc0001312-1491911889:53881..53978Clytia hemisphaericaexon
TCONS_00035439-exon-sc0001312-1491911889:53645..53735TCONS_00035439-exon-sc0001312-1491911889:53645..53735Clytia hemisphaericaexon
TCONS_00035439-exon-sc0001312-1491911889:50089..50125TCONS_00035439-exon-sc0001312-1491911889:50089..50125Clytia hemisphaericaexon
TCONS_00035439-exon-sc0001312-1491911889:49840..49964TCONS_00035439-exon-sc0001312-1491911889:49840..49964Clytia hemisphaericaexon
TCONS_00035439-exon-sc0001312-1491911889:49501..49555TCONS_00035439-exon-sc0001312-1491911889:49501..49555Clytia hemisphaericaexon
TCONS_00035439-exon-sc0001312-1491911889:49027..49282TCONS_00035439-exon-sc0001312-1491911889:49027..49282Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0001312supercontigsc0001312:49027..60966 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
5.87697	5.95833	3.34928	3.42774	2.82086	2.13415	1.72858	1.72516	2.94396	4.31306	2.46663	3.07519	5.01976	4.74963	5.74223	7.3085	7.16026	7.66562	1.86274	1.93926	3.80453	4.6915	3.98187	3.50771	3.61579	6.38983	2.06891	1.85196	2.8854	3.86541
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00035439 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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