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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00035385 ID=TCONS_00035385|Name=TCONS_00035385|organism=Clytia hemisphaerica|type=transcript|length=1191bp
gctaaataattaaaaacgACTTTGAGTTGTCCGGTTGTAACCCCCGGTTT
TCATTTTCGTCAACAAATTCATAACATTGGAAAAATAAGTCTTTCAAAAT
TCTGGTTGATGAAAGCAGGAAGCAAGCCAAACCAAGTCGTTGGAAGAAGA
CTGAAGCATAAGACCTGGTTTCTCCCCTAAGCCTTTGTAAGTACCAAATT
TAGCTGAAAATGTCCTTTTTGCCTTTGTTTTTTTGTCTTAGCTGGAATAA
TTTTTCTGAGACTCTTTCACATgctttttttggcactttttcagCAGTCT
GTCACTTTTTTCTGAGAGATGCCTCTGGCAATATCACATTAATGCATTTT
CAGGGGACTGTGACTAGATATTTTCTTTCTATGATTGTTGTTTCTAGTGA
ATGTATTGCAACAATAAATActgtattttttaaattctaaagaAACAGAC
CTAGACATGTTTTATGATACTTTTGTAAAGTgtattcaaattaaataaat
agataTAGAAATCGGTTCAATGGAAACTTGAATAGCCGTCCTTTATTGGg
agggggttgtacttttactgTGTGACGGGATTGGTCCTTTTTAAGTATGG
TATTATGGGATTTGacatttgacgaaaaaaaagacaggaaaacggtattt
taaaattagacggtgacggtatttggccttattttttgtcattagcCTGT
ATTTGAACTTGTACAAActggtgtgacggtgttattatttttttcaattt
tcgggattcctggattcagcaaaaattttgacgtgaAAACGGCATTTCAa
acccctacaacccccccTTTATTTGCACTTGATATTTTGCATTCAGGATG
TGATTTTCAGcagttttctaacatttttgtgGAAATTCCATGCAGTCCAA
TTGAGGCTAAGAAGGGAACAACTAAACTAGGAGCTAAACcttgaaattaa
aataatttttcattccaACCTACCCATTTTCAAAATCTAGGGTTTGGGTa
ttgacaaaccaacctttttaagtccagcctggCCCATTTGTTATGAAAGG
GTTGTGctccatatattttttcaagatttacagAATAGCACAAAGGAGTA
TGAAATCTACGGTTATTGCATCAAATTGTCTCTTGAAAATTGTAATTAAA
ACAAATTAGCTAAACTAAAGTGAGAATGAAGtaaatttttg Run BLAST on NCBI transcript from alignment at sc0001306:18287..19477 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00035385 ID=TCONS_00035385|Name=TCONS_00035385|organism=Clytia hemisphaerica|type=transcript|length=1191bp|location=Sequence derived from alignment at sc0001306:18287..19477 (Clytia hemisphaerica)
caaaaatttaCTTCATTCTCACTTTAGTTTAGCTAATTTGTTTTAATTAC
AATTTTCAAGAGACAATTTGATGCAATAACCGTAGATTTCATACTCCTTT
GTGCTATTctgtaaatcttgaaaaaatatatggagCACAACCCTTTCATA
ACAAATGGGccaggctggacttaaaaaggttggtttgtcaatACCCAAAC
CCTAGATTTTGAAAATGGGTAGGTtggaatgaaaaattattttaatttca
agGTTTAGCTCCTAGTTTAGTTGTTCCCTTCTTAGCCTCAATTGGACTGC
ATGGAATTTCcacaaaaatgttagaaaactgCTGAAAATCACATCCTGAA
TGCAAAATATCAAGTGCAAATAAAgggggggttgtaggggttTGAAATGC
CGTTTtcacgtcaaaatttttgctgaatccaggaatcccgaaaattgaaa
aaaataataacaccgtcacaccagTTTGTACAAGTTCAAATACAGgctaa
tgacaaaaaataaggccaaataccgtcaccgtctaattttaaaataccgt
tttcctgtcttttttttcgtcaaatgtCAAATCCCATAATACCATACTTA
AAAAGGACCAATCCCGTCACAcagtaaaagtacaaccccctcCCAATAAA
GGACGGCTATTCAAGTTTCCATTGAACCGATTTCTAtatctatttattta
atttgaatacACTTTACAAAAGTATCATAAAACATGTCTAGGTCTGTTtc
tttagaatttaaaaaatacagTATTTATTGTTGCAATACATTCACTAGAA
ACAACAATCATAGAAAGAAAATATCTAGTCACAGTCCCCTGAAAATGCAT
TAATGTGATATTGCCAGAGGCATCTCTCAGAAAAAAGTGACAGACTGctg
aaaaagtgccaaaaaaagcATGTGAAAGAGTCTCAGAAAAATTATTCCAG
CTAAGACAAAAAAACAAAGGCAAAAAGGACATTTTCAGCTAAATTTGGTA
CTTACAAAGGCTTAGGGGAGAAACCAGGTCTTATGCTTCAGTCTTCTTCC
AACGACTTGGTTTGGCTTGCTTCCTGCTTTCATCAACCAGAATTTTGAAA
GACTTATTTTTCCAATGTTATGAATTTGTTGACGAAAATGAAAACCGGGG
GTTACAACCGGACAACTCAAAGTcgtttttaattatttagc
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00035385-exon-sc0001306-1491911889:18287..19477 | TCONS_00035385-exon-sc0001306-1491911889:18287..19477 | Clytia hemisphaerica | exon |
| TCONS_00035385-exon-sc0001306-1510915933:18287..19477 | TCONS_00035385-exon-sc0001306-1510915933:18287..19477 | Clytia hemisphaerica | exon |
| TCONS_00035385-exon-sc0001306-1575043694:18287..19477 | TCONS_00035385-exon-sc0001306-1575043694:18287..19477 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0001306 | supercontig | sc0001306:18287..19477 . |
Blast
The following BLAST results are available for this feature:
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