TCONS_00035377 (transcript) - C. hemisphaerica

Overview
NameTCONS_00035377
Unique NameTCONS_00035377
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length179

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00035377 ID=TCONS_00035377|Name=TCONS_00035377|organism=Clytia hemisphaerica|type=transcript|length=179bp
CTAAAACTTTTGTCTGTTGAAGTTTTCAAGTCAATCCAGCACATCGGACC
TAGCATTATGCATGATATTTTCAATACAGGACAATCTGCTTATACCCTCC
GTTCTGGTCACACCTTAGCTTTACCATTATATTAAAAATATGATAGTGTT
TTTGCTGTAAATACCTTTGACTTCAGAGC
Run BLAST on NCBI

transcript from alignment at sc0001305:32308..32486

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00035377 ID=TCONS_00035377|Name=TCONS_00035377|organism=Clytia hemisphaerica|type=transcript|length=179bp|location=Sequence derived from alignment at sc0001305:32308..32486 (Clytia hemisphaerica)
GCTCTGAAGTCAAAGGTATTTACAGCAAAAACACTATCATATTTTTAATA
TAATGGTAAAGCTAAGGTGTGACCAGAACGGAGGGTATAAGCAGATTGTC
CTGTATTGAAAATATCATGCATAATGCTAGGTCCGATGTGCTGGATTGAC
TTGAAAACTTCAACAGACAAAAGTTTTAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_020669XLOC_020669Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00035377-exon-sc0001305-1491911889:32308..32486TCONS_00035377-exon-sc0001305-1491911889:32308..32486Clytia hemisphaericaexon
TCONS_00035377-exon-sc0001305-1510915933:32308..32486TCONS_00035377-exon-sc0001305-1510915933:32308..32486Clytia hemisphaericaexon
TCONS_00035377-exon-sc0001305-1575043694:32308..32486TCONS_00035377-exon-sc0001305-1575043694:32308..32486Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0001305supercontigsc0001305:32308..32486 .
Expression
No biomaterial libraries express this feature.
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00035377 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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