|
|
Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00035371 ID=TCONS_00035371|Name=TCONS_00035371|organism=Clytia hemisphaerica|type=transcript|length=1474bp
TCTGAACTTTGTTAAATAGATTATAAAATAGCAGAAGTGTGTGTGTACTT
CTttcctggaaaaaaattataaacaatgaAATGCAAATAAGCAGTTTCTT
TTCTGCGATGAGCTATTTATTTGAATGTGATAGCTATATAATAGAGCATG
AATGAGAAAtttatggtttctttttttgctttagCTGTAATGAAAAAATA
GTAAAGAATAATGAACAAAGTCAACATTGTGTCTACATTTCGAACGAAAT
CGTGTGAGTGGGATAAAACCCTGTTTTACAAAGACTTCATTATAAACTTT
TCTTGCCATCCAGAGGAGAAGCGAGTGGGGCTGCTGATGATAATTATGTT
ATAGACAAGGACTACAgtatgtaaagaaattttgatggTTGCTAGGAAAA
TATACCAAGTGATCTAACAAATATGGCAAGTTTGGAGGAGAGAAACAAAC
ACTACCGTGTGTCGTTTCACCAGCTCTTTACCAGCAATGGAATGGATGGA
ACCAAATTGTAGAAAAGAAATTGCTTCTTAAGCAGCAATCCCAAGGTTTT
GCGAGTTTTGCATTACTGTTGATTGAAATAACTTTTCTATCTGAGAGGTA
ACTTTCACCATCTCGAAAACACCAGTTTGTTTTTAGTTTCATTGAGCTAC
AGCAGTAAACATTATTATAAAAGGTATCAACAAAATGAAGTAGACTGCTA
CAAACTGGATTTATTTAGTCAATATGGTATTTTTGAAgacttttgtttct
ttctaaaTTATGGGCgcgactaaattttggcttggtaaCTAAAATTAGGg
tcgactaaaaatttgggctgaCTAAAAATATGGGTCAAATTAGaagcttt
ctcctattttccatctgcttgtagttatttagaaatggcccaaatttttt
GTCGGTCTCAATTATTAATCAGCCCTTAGTGATTAAATTTTGAcaaggtg
actaaaattagggcagaataataattaaggccgactaaaattaaagcCGA
CAAAGTTTTCGCCGATAAGGTATTGTTTTGAACTTGAAACTCGGGTTGAg
aagttagtttgttttgcttacTTATTGATCATGTGATTAGCTTTTGAACC
ACTCTTAAGAGGAGTATTTGGTATAATAACAAAGGAAAAATCTGGACTTA
CTCAGTATTTTTATAAGAATATTCTTATGTTCCTGTTGTTTATAATTATA
ATTTTTGCTATAATACTATCTTATCTTCTTTCAAGAAATGTATATCAATA
GACCTTTTCATAAAtaacgtcacaaacatcacttgcctcgttttgaaatt
attgccatggtgattaactcccaacagattttattaaaactcaTTTGATT
TATATgcatgtaatttatgaaaaggtctatttgttaACATAACTTTTCCA
AAGCCTAGACATTCTACATATATCAgtataaagtcttttttataagaacc
atctAATTATAGATTTTTGTTGAC Run BLAST on NCBI transcript from alignment at sc0001303:62588..64061 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00035371 ID=TCONS_00035371|Name=TCONS_00035371|organism=Clytia hemisphaerica|type=transcript|length=1474bp|location=Sequence derived from alignment at sc0001303:62588..64061 (Clytia hemisphaerica)
GTCAACAAAAATCTATAATTagatggttcttataaaaaagactttatacT
GATATATGTAGAATGTCTAGGCTTTGGAAAAGTTATGTtaacaaatagac
cttttcataaattacatgcATATAAATCAAAtgagttttaataaaatctg
ttgggagttaatcaccatggcaataatttcaaaacgaggcaagtgatgtt
tgtgacgttaTTTATGAAAAGGTCTATTGATATACATTTCTTGAAAGAAG
ATAAGATAGTATTATAGCAAAAATTATAATTATAAACAACAGGAACATAA
GAATATTCTTATAAAAATACTGAGTAAGTCCAGATTTTTCCTTTGTTATT
ATACCAAATACTCCTCTTAAGAGTGGTTCAAAAGCTAATCACATGATCAA
TAAgtaagcaaaacaaactaacttcTCAACCCGAGTTTCAAGTTCAAAAC
AATACCTTATCGGCGAAAACTTTGTCGgctttaattttagtcggccttaa
ttattattctgccctaattttagtcaccttgTCAAAATTTAATCACTAAG
GGCTGATTAATAATTGAGACCGACaaaaaatttgggccatttctaaataa
ctacaagcagatggaaaataggagaaagcttCTAATTTGACCCATATTTT
TAGtcagcccaaatttttagtcgacCCTAATTTTAGttaccaagccaaaa
tttagtcgcGCCCATAAtttagaaagaaacaaaagtcTTCAAAAATACCA
TATTGACTAAATAAATCCAGTTTGTAGCAGTCTACTTCATTTTGTTGATA
CCTTTTATAATAATGTTTACTGCTGTAGCTCAATGAAACTAAAAACAAAC
TGGTGTTTTCGAGATGGTGAAAGTTACCTCTCAGATAGAAAAGTTATTTC
AATCAACAGTAATGCAAAACTCGCAAAACCTTGGGATTGCTGCTTAAGAA
GCAATTTCTTTTCTACAATTTGGTTCCATCCATTCCATTGCTGGTAAAGA
GCTGGTGAAACGACACACGGTAGTGTTTGTTTCTCTCCTCCAAACTTGCC
ATATTTGTTAGATCACTTGGTATATTTTCCTAGCAAccatcaaaatttct
ttacatacTGTAGTCCTTGTCTATAACATAATTATCATCAGCAGCCCCAC
TCGCTTCTCCTCTGGATGGCAAGAAAAGTTTATAATGAAGTCTTTGTAAA
ACAGGGTTTTATCCCACTCACACGATTTCGTTCGAAATGTAGACACAATG
TTGACTTTGTTCATTATTCTTTACTATTTTTTCATTACAGctaaagcaaa
aaaagaaaccataaaTTTCTCATTCATGCTCTATTATATAGCTATCACAT
TCAAATAAATAGCTCATCGCAGAAAAGAAACTGCTTATTTGCATTtcatt
gtttataatttttttccaggaaAGAAGTACACACACACTTCTGCTATTTT
ATAATCTATTTAACAAAGTTCAGA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00035371-exon-sc0001303-1491911889:62588..64061 | TCONS_00035371-exon-sc0001303-1491911889:62588..64061 | Clytia hemisphaerica | exon |
| TCONS_00035371-exon-sc0001303-1510915933:62588..64061 | TCONS_00035371-exon-sc0001303-1510915933:62588..64061 | Clytia hemisphaerica | exon |
| TCONS_00035371-exon-sc0001303-1575043694:62588..64061 | TCONS_00035371-exon-sc0001303-1575043694:62588..64061 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0001303 | supercontig | sc0001303:62588..64061 . |
Blast
The following BLAST results are available for this feature:
|
