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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00035369 ID=TCONS_00035369|Name=TCONS_00035369|organism=Clytia hemisphaerica|type=transcript|length=1198bp
agtttctCTTTAATAATCTTTCAGCACATCACGGATTTTGTTTACCTTGA
TTACATTGTCCAGCTCATAGTAGACAAGCACTGTGATTGTATTAGGCAGT
GGGTTGGCAAATTCCAGTGTAATTTGAAGGCTGCCTTCTTGCGCACGCTC
CGCGTGTGGTCCGTTACAAAGGGCTGGTGAAAGATCCCAGCCAAATAAGC
TATATCCTTGAGAGTATTCCTTTCTATTTATACAAATGCCTTCGTCTCGA
TGACTTTTTCCGGTTGCTGCAAAAATACTCCTATATCCTTCTAGATATTC
CCCGTCTGTAAAGTTTAGTTTCATAGGGGGTGAAGTATTTTTACCGTTAA
CATAAACAGAAATTTCGCGAACATCAAAATGTTTAAAGTTAAAAGGGTTC
TTTTTTAAGTTTCCGGTATAAGCATCATTGTCAATCATAGCCAAGAATAA
TCGTTTTGGTAATTGTCCGAGAATCAAATTGTCCCAATTAAGGCTAGTTA
AGCCAGCAGCAATGCtatgtgtttttaaattgatacGGTCAATGGGGTAT
GATGCTACATTCTTTTCAAGACTTTTCTGGATTTCTACAAATTTATGATG
TGTTAATTCAACTTTTCGAACACAAACAACAGCATCGATAATGCTTATTT
TGTGATTTGTAGCACCACTCATTAAGCTAAAAGCATCTTTATTTCgatga
aaaacaaatttgattgGTAAGCCGTTGATAATGAGTCTACCTTGATTACA
CAAGTCGGTGTGTAATCTACCAATCAGCTCAGTTGGTTTACTTTCTTTGG
TGTAATCACTTCTCTCTTTCAATCCGCTGTTATCTTTGCCAGGATCTGTC
TCGTCCAAATGTCCGGCAGTGTCTGGTGAAAAAAGTCCCATTGCAAGTTG
TGTATTTTTAGCATCAGAACCATAATTAAGAAGAAGTTCAATGATAGATC
TGTAAGGATATGTATTGTTTGATGAGCTTATCAGAGTACCTCCCAAGTAC
ACATCTAATTGACTAAACATTGACGCGATTGGATAATTGATAAAAGAAAC
TTTATCAGTGTTTTTCAAAGGTGTGCCATCTACGTTAACAATTTGGACTT
TCAATCTtatgggttggtgtaatttaagatgcacgatctaacgatttacg
attcacgatgcacgatccatgcataaagtatgctgattattccgaATA Run BLAST on NCBI protein sequence of TCONS_00035369-protein >TCONS_00035369-protein ID=TCONS_00035369-protein|Name=TCONS_00035369-protein|organism=Clytia hemisphaerica|type=polypeptide|length=336bp
MFSQLDVYLGGTLISSSNNTYPYRSIIELLLNYGSDAKNTQLAMGLFSPD
TAGHLDETDPGKDNSGLKERSDYTKESKPTELIGRLHTDLCNQGRLIING
LPIKFVFHRNKDAFSLMSGATNHKISIIDAVVCVRKVELTHHKFVEIQKS
LEKNVASYPIDRINLKTHSIAAGLTSLNWDNLILGQLPKRLFLAMIDNDA
YTGNLKKNPFNFKHFDVREISVYVNGKNTSPPMKLNFTDGEYLEGYRSIF
AATGKSHRDEGICINRKEYSQGYSLFGWDLSPALCNGPHAERAQEGSLQI
TLEFANPLPNTITVLVYYELDNVIKVNKIRDVLKDY Run BLAST on NCBI transcript from alignment at sc0001303:12505..13702 Legend: exonfive_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00035369 ID=TCONS_00035369|Name=TCONS_00035369|organism=Clytia hemisphaerica|type=transcript|length=1198bp|location=Sequence derived from alignment at sc0001303:12505..13702 (Clytia hemisphaerica)
TATtcggaataatcagcatactttatgcatggatcgtgcatcgtgaatcg
taaatcgttagatcgtgcatcttaaattacaccaacccataAGATTGAAA
GTCCAAATTGTTAACGTAGATGGCACACCTTTGAAAAACACTGATAAAGT
TTCTTTTATCAATTATCCAATCGCGTCAATGTTTAGTCAATTAGATGTGT
ACTTGGGAGGTACTCTGATAAGCTCATCAAACAATACATATCCTTACAGA
TCTATCATTGAACTTCTTCTTAATTATGGTTCTGATGCTAAAAATACACA
ACTTGCAATGGGACTTTTTTCACCAGACACTGCCGGACATTTGGACGAGA
CAGATCCTGGCAAAGATAACAGCGGATTGAAAGAGAGAAGTGATTACACC
AAAGAAAGTAAACCAACTGAGCTGATTGGTAGATTACACACCGACTTGTG
TAATCAAGGTAGACTCATTATCAACGGCTTACcaatcaaatttgtttttc
atcGAAATAAAGATGCTTTTAGCTTAATGAGTGGTGCTACAAATCACAAA
ATAAGCATTATCGATGCTGTTGTTTGTGTTCGAAAAGTTGAATTAACACA
TCATAAATTTGTAGAAATCCAGAAAAGTCTTGAAAAGAATGTAGCATCAT
ACCCCATTGACCgtatcaatttaaaaacacataGCATTGCTGCTGGCTTA
ACTAGCCTTAATTGGGACAATTTGATTCTCGGACAATTACCAAAACGATT
ATTCTTGGCTATGATTGACAATGATGCTTATACCGGAAACTTAAAAAAGA
ACCCTTTTAACTTTAAACATTTTGATGTTCGCGAAATTTCTGTTTATGTT
AACGGTAAAAATACTTCACCCCCTATGAAACTAAACTTTACAGACGGGGA
ATATCTAGAAGGATATAGGAGTATTTTTGCAGCAACCGGAAAAAGTCATC
GAGACGAAGGCATTTGTATAAATAGAAAGGAATACTCTCAAGGATATAGC
TTATTTGGCTGGGATCTTTCACCAGCCCTTTGTAACGGACCACACGCGGA
GCGTGCGCAAGAAGGCAGCCTTCAAATTACACTGGAATTTGCCAACCCAC
TGCCTAATACAATCACAGTGCTTGTCTACTATGAGCTGGACAATGTAATC
AAGGTAAACAAAATCCGTGATGTGCTGAAAGATTATTAAAGagaaact Coding sequence (CDS) from alignment at sc0001303:12505..13702 >TCONS_00035369 ID=TCONS_00035369|Name=TCONS_00035369|organism=Clytia hemisphaerica|type=CDS|length=1011bp|location=Sequence derived from alignment at sc0001303:12505..13702 (Clytia hemisphaerica)
ATGTTTAGTCAATTAGATGTGTACTTGGGAGGTACTCTGATAAGCTCATC
AAACAATACATATCCTTACAGATCTATCATTGAACTTCTTCTTAATTATG
GTTCTGATGCTAAAAATACACAACTTGCAATGGGACTTTTTTCACCAGAC
ACTGCCGGACATTTGGACGAGACAGATCCTGGCAAAGATAACAGCGGATT
GAAAGAGAGAAGTGATTACACCAAAGAAAGTAAACCAACTGAGCTGATTG
GTAGATTACACACCGACTTGTGTAATCAAGGTAGACTCATTATCAACGGC
TTACcaatcaaatttgtttttcatcGAAATAAAGATGCTTTTAGCTTAAT
GAGTGGTGCTACAAATCACAAAATAAGCATTATCGATGCTGTTGTTTGTG
TTCGAAAAGTTGAATTAACACATCATAAATTTGTAGAAATCCAGAAAAGT
CTTGAAAAGAATGTAGCATCATACCCCATTGACCgtatcaatttaaaaac
acataGCATTGCTGCTGGCTTAACTAGCCTTAATTGGGACAATTTGATTC
TCGGACAATTACCAAAACGATTATTCTTGGCTATGATTGACAATGATGCT
TATACCGGAAACTTAAAAAAGAACCCTTTTAACTTTAAACATTTTGATGT
TCGCGAAATTTCTGTTTATGTTAACGGTAAAAATACTTCACCCCCTATGA
AACTAAACTTTACAGACGGGGAATATCTAGAAGGATATAGGAGTATTTTT
GCAGCAACCGGAAAAAGTCATCGAGACGAAGGCATTTGTATAAATAGAAA
GGAATACTCTCAAGGATATAGCTTATTTGGCTGGGATCTTTCACCAGCCC
TTTGTAACGGACCACACGCGGAGCGTGCGCAAGAAGGCAGCCTTCAAATT
ACACTGGAATTTGCCAACCCACTGCCTAATACAATCACAGTGCTTGTCTA
CTATGAGCTGGACAATGTAATCAAGGTAAACAAAATCCGTGATGTGCTGA
AAGATTATTAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this transcript:
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00035369-exon-sc0001303-1491911889:12505..13702 | TCONS_00035369-exon-sc0001303-1491911889:12505..13702 | Clytia hemisphaerica | exon |
| TCONS_00035369-exon-sc0001303-1510915933:12505..13702 | TCONS_00035369-exon-sc0001303-1510915933:12505..13702 | Clytia hemisphaerica | exon |
| TCONS_00035369-exon-sc0001303-1575043694:12505..13702 | TCONS_00035369-exon-sc0001303-1575043694:12505..13702 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0001303 | supercontig | sc0001303:12505..13702 . |
Blast
The following BLAST results are available for this feature:
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