TCONS_00035368 (transcript) - C. hemisphaerica

Overview
NameTCONS_00035368
Unique NameTCONS_00035368
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length7185

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00035368 ID=TCONS_00035368|Name=TCONS_00035368|organism=Clytia hemisphaerica|type=transcript|length=7185bp
AGCAtgattacgcatgaattaacatattttatgcacggatcgcgaatcgt
gcatcgtaaatcgttagatcgtgcatcttaaattacaccaaccccaaTCT
TATGTAGGTGTTTACCAAGTCTAAAAAAAGGTCGGTTGCGTTTTTGATAA
TGAACTCTAGTGGTCCGTTGTCTTTTAGGTTTGTTATCGGATAAACTTCT
TCAAAGGTGCTACTTTCGATATCTGATTGAACGTAAACTGGAGTGAATAA
GTCTGTGTCCGAGAGTGCACATTCAATATGGTTTTTGTCTTTTACTGAca
tcttcttttttataaaataccaaGCGTGTTAGCCTTTCGGTTGAGTTTTC
TTCGTCCTTTCCCTTTGAGTGTCTTTTTACCAATGGGGTTTGCATGGTTT
TTCTTGGCTTTTTTAGTGGAAGGTTGAAAAAGTTCTGTAgcattttctat
tgttcttcgttttaaagaagattttaatttttttccttgGCTTACATCGC
TCACTACTTCCAAGCCTGTTTTGAGCGCTTTTTTTCCTACTTGTTTAAGT
CCTTGCTTCAGCTTGGGCGTCACTGCTCTCAGTAATCCTCTGAATAAGCC
TCCTAGGCCATATCCCCTTTGCATAACTATCCCACGATAAGCTGGTAAAC
CATAGCCAGTTTGATACATATTATTTACTGATAAAATCTTGTAGATATTC
TTTCAAATACCAACGTGATTATAGCTCTGCCTGATTCAAATGAAACCAAT
TGTCCTAAATTATCCCttatatttatttcaatattgttgATATTCTCACG
GCTTAGCTTTAGAAACTGTGGCTTGTCAAATCGCACCCAATTTATTTCCC
CAAACTTTGATCTTATTGGAATGATTCTAAGCAAGGGCACTTTAAAATCA
CCTACATGTTGATTTTCTACTATGTCGCTGTATACATAGATGATTTCTAA
CGGTTGAGTTGTTCCAATGGAATTTGAAATGATCGTTATCTTTTCATCAA
GAGCTGAGATGCTAGATATGTCGCCACTCGGATCAAATCCAAAACATTTA
GCAATGTCAGAGTTATTCCATTTGATTGTACAATCTCTAAATATGGTAAC
AGATGTTTTACTCGTTATATCTAAAGAAAAATCCATTGGTCTGATGTCTC
CTTCATCTTGCTTGTTTAAAGCTTTTATAATATCTAGTATATTTTGGTAA
ATTCCTGGTTTAACCGTAATCAATTTTGCCAACGTATCTTTCCCAGATTT
ATCTTTAAGAAATGTATAAGGTgtggtagacttggtcaaatttaGCGTTT
CATCTTCGGTTATGTTGTAATAGAATTTTATAATTGTATTGCTACCATCC
TTAATTGTGTACCAGCTATGTGGAAAAATGATTTCTTTTAACGCAACTTT
CCACTGGGTCGGTGATACTTTAATTTCATCTGGAAAATACGTAGTGTACT
TGGATATTTTATTATCAGGGTAAACACTCATAGAACTATCGCTGGGCAAT
GAAATGAAGAATTTATCCGTATCCATCTTTTCCAAAAGCTTTTAGGTCTT
TTTCAGATACAAAGCTATTAAATTTCGAAGGGTATCCTTTCCATTTCACA
AGATAAATCCACTTTCTGTTTTTCTGTCTTTTACGACTGATGATCTTTTC
TATCTTGTAGAAGTCAGGCTCGCTCACCTTTTGAAGTTCTTGTTTATAAA
ACGTTCCTTTGATCTGCTCACCAGCCTGATCTTTCACCTTGTAGACGACT
GGAGTCTTTGGAAGTTTATGAGATATGAAAAATATCTCCTCGCTCCAGCC
TTCTAAATAACTTTTATGAAATGTTCCTCTTTCGAGAGTGATTCTGACCG
GATCGCCAATTTGAAAGTCTGTTGGGTtatttttaacatgtttttGGTTT
GGGTAAAGTGTCATCCAAATTTTCAGCTCGTTCTCTTTTGTGACTTTAAT
TGGAGATGTTTTTATCGATCTATGGTATGCGTTATTATATCGAGATATTA
GATCTTGTAAGATATCGATGTATTTTCTAGTTTCACGtgatgaaaaatat
ttaaacattAATCCCTTGATGGTCCGATTTACCCTCTCAACAACTGACGC
CTTGCGCTCACTAAAGCTGGTAAAGAATTTAATATTGTTTTCATTCAACA
GTTTctgaacttttttatttaaaaattctgTTCCCCGATCTGTTTGTATA
ACGAGTGGCTTTCTACCTTTAGAGAAAATGTCTTTCAGGGCATCGTATAT
TTCTTGAGCGCTTTTGCTTTTTAATGCTCTGACCCAGACAAACTTTGATA
AAATGTCAATGCATACCAATAAAAATTTATGTCCATTATTATATTTAGAA
AGGTTCTCAATCGAAATCAGATCAAGCTGCCATTGATGATCGATGCCATG
AACAAGGACTCTTCTGGTTTTATAGTGCGTTCTAATAGGATAGTGTAACG
TATATGCCCCATCTTTCGATAACCATTTTTTTCACATCTTTCAAAGTCAA
ATCAGGGTGTTTCTTTTTGGCTGCTTTGTATAAGATgtaagaagatgaaa
atgaagcaGGCGATTTTAAAGAATGATACAAATTGTGTagagtgttttct
ttttctttggttAAAGAcattatttacaaaatatattattttttcttcag
attttgTTTACCATCAATTTGACTGTGTTCCATTATCAGTGTGGATCCGC
AACAAACTAAAACACATTTAGTTCGcctgaaaaagtttcttattctCAGA
AGAACATCCATCTTCTTTGAAATGTATACaacaaatgaattcaaaaagaa
GCTTTATCGGTTATATGAGGTTGATGATAGCCATTTGATTGGGGTGTTGG
ATTTAgtgttttttagttttaaagggTATGGTGTTGATCGTGAACgtttc
cttttgtttttaattgGATGTAGATAGTTTTCCTTATTTTGCATTTCCat
catttctttcatttcgtcGTTTTTTACCCATTCCATCGGTAATTCAATGT
TTACCAACCCTTTGGAAAAAATGTTTCTAAATTGAGATGgagatattgat
ttttttctgttggTAAGGGTGTCGATCAAAAGATCAGATATATTTGATCC
ATTCAAAGTTGTTCCACCTATTGTAACctctttgtttttattccaGCTCA
TTTTGTCAGTATTTGCCTGGATGAATGAAAGGATTTGGTGTCCATTTTTG
CGATATGTTTTTGGTAGTGTTAACTTTATATCTTCTACTCCAACACGAGT
TTCGTTAGTAGCTGTTTCTGTTTCTTCGAGTGATCTTTCTTTTGTTCTTG
GTTGAGTGTCTTGTGCATTTTTTAGATTATTGGAAGTGACTTCTAGCGTT
TTTGTTTTAGGTATATTTGGTTTTTTAAGGTTTGGTTTTCTAAGTTCCTC
TCTGTATCTTCTCAATGAGTTTAGCTCTTTGGTAAACTCTTTCACTTTTT
CATCGTCTGGCATGTCTTTTCGATCCCAAacactttttgtttttctatct
GATTCTGTTATGGCTGCTCGCTCAGGTGGTAACAGTAAGTTTGAATCATT
TTTGTTTCCTGATTTCTCGAGTAAATTTTCATATACTTCTGGCGATAACA
ACACATATTTTTTGTTGGCGAATGATTTATTATTCATATTTTATAGTCCA
AATAAAAACTTTGCTATTCCACCTAGAGCTTTTAATATAATACTTCCTCC
GTGTTGCACAAGCAATGACCTTTTACGAACTGTGGGAGTTTTAGGATTTA
TAAGATCTTTAaggattttcttctttcttcttagttgtgttttttgggtt
tttgagATAGGTATATTTCCATGAACTATATTTGTTAAACAATCACAAAG
TGCATTGACAACTTCCGGTTTGGCGtgttttaacaaaattttacgATCGT
TTGGTGAACACGAATGTATAGCTTGTATCATATGGGCGTGTTGCTTCATT
CTTTGCGTCATTTTCATGTCTTAATTCGTCAATCTTTTACAAATGAATGA
AATAGAAATTGTGATTTCTCATCTTATGTAGACAAATTTAGGTTCTTCAT
CTGGTAAAATGTTAGTTCTTATTCTCAAATCTTCATTGCTGTTTGGTTTT
AAATCGAGAAAGAGATAAGAGTGAGGATTTTTGGTAGCATCTTCATATAC
CCATTTCATAAAATGTATATCATTTGGCATAAATTGTTTTGCTAGATTTG
TGAACTGTGATTTATCTCTGACGTTTTTAAAGATTATCATGTAATCTGAA
TTAAGGCTTATTGTTCTTTGCTTTGcatgaaataaattttgtgtTATGAA
TATGACAGACATGTTATCATGCCTTCCTCGAGTGAATAATTGTGCAACAG
ATTTGTTTTCACCTCCCTCGTCCATGAGATCATCTAGGATTATTAGATTA
TGCATGTTCTTATCAAACATGGTGCTAAGATTTTCGGGAATGCCTAGAGT
ATATTCAATTTTGTTGTCTATTCTCATCAGTTCATTGAATAATTGCGGCT
GATGTTTCGAATATAACCAAATTATCCTATCAATCGGTTGGTCAATGAGA
TCCTTTCTGTATCTTAAAAGTTTCTTTGTAAATTCAGTTTTCCCACTAGC
TCTCCCACCAGACAATAGCAAGCTAAACGGATGTTTAAAGAGATGTTTAT
CCATCGCGAACTTGAAGGAGACTAATTATGAATAGATAAACATATGAATT
TAAACAGGTTTTCAAAGAACAAAAGTAAATTCAATGTATGATTTTAATAA
TTATGAGGTATTCTCTATAAACATAATTGATATACAGATATATGCAAACA
TTAATATTAAGATTagataaaatatattttctacATGTCAGTTATATATG
TAACTTGGGAGGCTGTTTTCAAGACTATATATAAATTGTCGttataactt
taaaaaaagtcgTCACTGTATTGTTCGCTGTTTGCTGTGACATTGAATGT
CTTTGAATAAGCATATATTTTGTTGAGATGTTTCAACAGTTTATATGTCT
CTGTTAGGAATAAGAATATTCCGCAGCCATCTTCTTTGCGTTCTTTGATC
ACTAGTTGGATTTTTCCTACTTGTGTAAGAGATACTTGAATCGATGGGTC
GTCAGGATGATTGATCCAAGCATATGAGTTTGTTTCTGTAATGGTTTGAT
TAACTTCCCAATTTGTAGAAAGTATTTCTGGAATTTCATTGACTAAAGTC
AATATGTTGTCTATCTGTTCAGCGTtgagaaatttttctctttgcaCTAT
ATCgtttttgtcaatcgaatgaaACAAAATAGCATAATATAATCGTTTTA
TTTCTTCATTTCCTTTAATCCCAAATCTGTGGAAGGCTGTGAGATCAGGA
TAGGTATTGCGAATAATCAAGGTGTCAGGACATCCTTCTTTCTGGTAGGC
GACTTTGTATGATGACAGTGAGACAGAATTCGGTTTGGCCAAATAGCATG
CTTTCACCATGTTGGTCGGCCTTTTTGGTGAAGATATTTCTTCTGCAGAT
GTTGATGCTCGTTTCATCTTGAGTGTTGTactttatgaaaaattaaactg
cGGTTTTTATATAGCAGTAAGATTATTTTAAGAATCTACTTAAAATAGTT
CTTTTTGTAATCATACTTTGTAAGTTGATGGATTGCAAGAGCTTATCTTG
TATATTAAATATGCTTCTCTGACTTTGTTTTTAGGGAATTTTCCAAATGT
ATCTGGTTTAAAAAACAGCTCTAGTGCCCAGTTGAAAAAAGTAGTGTCTG
ATTTCATTTCTTCTTTGGTAAGATAGAAGGATTTATAATTTTCTTCTAAA
GCGAGCCTTGTAATTTGATtcaataaattttcatttaattcaTCAAAAAT
GTTGTTGAATATATCTTCTTTTTCGCTCGTTTCAAGTTCTATTATTCTTt
tatcttgatatttttcgtcaaaattttcCTGAATAAATTCAGCAATTGTA
CATAGCATAAATAGCTTATAACGTTGACAATCAGATTCCATTTTGTTTCT
GAAGATGTTTATCATTATGTTAGATTTTTATAAATGAACTATATTATAAA
GTAGTCTCTTGTTTTATATGTTTTATTCATGTTCTATGATATTGCTAAAG
TCTCTATCGAtttgttcattttctttttcatgtttctgATAACAATCTAT
GCATGGTCCTTCAATTCCTAAATTAGGGTCATCAATCGCTTTTTTTTCAT
GACATTCTCTGCAAAAACATTCGTGACATAGTTCAAAGCATAGCTTGTCT
CCACATTGAGCACAATATAAGTCACCATCAAAATCCTTTCGCCATCTATA
TTCGTTGTATGCCTCTCTTGTTACCTTCAAAAAACATATTGTACATTGAT
TTCCCTCATCTTCCTCATCTGAATCGTAAtcacatttttcaattgttaTA
TTCCCATTTTCGATTAGCTTTTCACATTTGTGCTTGTTATATTGATCTAT
GATATCTCCGCAAAGGCAAGTAATCCAATTCATCTTTTGATGAAGTTTTA
TTGAAAGTTCATTCACCTCTTCACTCATTGTatcgtttatttaattttgt
ttaaaaaataaaatgatcaaCTTGCTTCTATTTATACCATTTTTCACTTT
GGCTTTGCCTTATAATTAAATCTGACTAAAATGGTTTAATATGATTATTA
CTTTAGGGATTAAAATAAAAACGTGGTGTTTTTGGATTAGTGGCGTTTTC
GAGGTGTTTTCGTGGTGTTCTCGTTAATCCCCATTGTCCCAGAACCATTC
AAACATTACTACTGACGATTTGAGAACTGAACTGGATCAAGTTGGGAAAG
GAAAGGTTGATTTGGACGACGTTAGCACAGTAGAGAGACAAAACAGTGAA
TTTCAACAATACATAAGAAGGAATAATATCGAAATTGCGGGTATCCCTGA
CTCTGTGAAACAAAACGAGTTAGAATCGAAAGTGATCGAAATAGCTAAAG
CCGTCAACATTGATATTCCTCCCAACGAAATCGAAGCTTGTCATCGCCTG
ttccaaagaaaaaatcaaaaaggtcCAAAGCGCACAATAGTGAGATTTGT
AAACAGAAAACTTGCAGAAAAGTTAATCAAAAAAGGCAAAGACTTCAGTA
AACGTGAGGTATTTGAAAAAGCAGATTTGAcaaataaaatttacattaat
aataacctttgcagttactacagaTTTCTCTGGGG
Run BLAST on NCBI

protein sequence of TCONS_00035368-protein

>TCONS_00035368-protein ID=TCONS_00035368-protein|Name=TCONS_00035368-protein|organism=Clytia hemisphaerica|type=polypeptide|length=283bp
MDTDKFFISLPSDSSMSVYPDNKISKYTTYFPDEIKVSPTQWKVALKEII
FPHSWYTIKDGSNTIIKFYYNITEDETLNLTKSTTPYTFLKDKSGKDTLA
KLITVKPGIYQNILDIIKALNKQDEGDIRPMDFSLDITSKTSVTIFRDCT
IKWNNSDIAKCFGFDPSGDISSISALDEKITIISNSIGTTQPLEIIYVYS
DIVENQHVGDFKVPLLRIIPIRSKFGEINWVRFDKPQFLKLSRENINNIE
INIRDNLGQLVSFESGRAIITLVFERISTRFYQ
Run BLAST on NCBI

transcript from alignment at sc0001303:4371..11555

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00035368 ID=TCONS_00035368|Name=TCONS_00035368|organism=Clytia hemisphaerica|type=transcript|length=7185bp|location=Sequence derived from alignment at sc0001303:4371..11555 (Clytia hemisphaerica)
CCCCAGAGAAAtctgtagtaactgcaaaggttattattaatgtaaatttt atttgTCAAATCTGCTTTTTCAAATACCTCACGTTTACTGAAGTCTTTGC CTTTTTTGATTAACTTTTCTGCAAGTTTTCTGTTTACAAATCTCACTATT GTGCGCTTTGgacctttttgattttttctttggaaCAGGCGATGACAAGC TTCGATTTCGTTGGGAGGAATATCAATGTTGACGGCTTTAGCTATTTCGA TCACTTTCGATTCTAACTCGTTTTGTTTCACAGAGTCAGGGATACCCGCA ATTTCGATATTATTCCTTCTTATGTATTGTTGAAATTCACTGTTTTGTCT CTCTACTGTGCTAACGTCGTCCAAATCAACCTTTCCTTTCCCAACTTGAT CCAGTTCAGTTCTCAAATCGTCAGTAGTAATGTTTGAATGGTTCTGGGAC AATGGGGATTAACGAGAACACCACGAAAACACCTCGAAAACGCCACTAAT CCAAAAACACCACGTTTTTATTTTAATCCCTAAAGTAATAATCATATTAA ACCATTTTAGTCAGATTTAATTATAAGGCAAAGCCAAAGTGAAAAATGGT ATAAATAGAAGCAAGttgatcattttattttttaaacaaaattaaataaa cgatACAATGAGTGAAGAGGTGAATGAACTTTCAATAAAACTTCATCAAA AGATGAATTGGATTACTTGCCTTTGCGGAGATATCATAGATCAATATAAC AAGCACAAATGTGAAAAGCTAATCGAAAATGGGAATAtaacaattgaaaa atgtgaTTACGATTCAGATGAGGAAGATGAGGGAAATCAATGTACAATAT GTTTTTTGAAGGTAACAAGAGAGGCATACAACGAATATAGATGGCGAAAG GATTTTGATGGTGACTTATATTGTGCTCAATGTGGAGACAAGCTATGCTT TGAACTATGTCACGAATGTTTTTGCAGAGAATGTCATGAAAAAAAAGCGA TTGATGACCCTAATTTAGGAATTGAAGGACCATGCATAGATTGTTATcag aaacatgaaaaagaaaatgaacaaaTCGATAGAGACTTTAGCAATATCAT AGAACATGAATAAAACATATAAAACAAGAGACTACTTTATAATATAGTTC ATTTATAAAAATCTAACATAATGATAAACATCTTCAGAAACAAAATGGAA TCTGATTGTCAACGTTATAAGCTATTTATGCTATGTACAATTGCTGAATT TATTCAGgaaaattttgacgaaaaatatcaagataaAAGAATAATAGAAC TTGAAACGAGCGAAAAAGAAGATATATTCAACAACATTTTTGAtgaatta aatgaaaatttattgaATCAAATTACAAGGCTCGCTTTAGAAGAAAATTA TAAATCCTTCTATCTTACCAAAGAAGAAATGAAATCAGACACTACTTTTT TCAACTGGGCACTAGAGCTGTTTTTTAAACCAGATACATTTGGAAAATTC CCTAAAAACAAAGTCAGAGAAGCATATTTAATATACAAGATAAGCTCTTG CAATCCATCAACTTACAAAGTATGATTACAAAAAGAACTATTTTAAGTAG ATTCTTAAAATAATCTTACTGCTATATAAAAACCgcagtttaatttttca taaagtACAACACTCAAGATGAAACGAGCATCAACATCTGCAGAAGAAAT ATCTTCACCAAAAAGGCCGACCAACATGGTGAAAGCATGCTATTTGGCCA AACCGAATTCTGTCTCACTGTCATCATACAAAGTCGCCTACCAGAAAGAA GGATGTCCTGACACCTTGATTATTCGCAATACCTATCCTGATCTCACAGC CTTCCACAGATTTGGGATTAAAGGAAATGAAGAAATAAAACGATTATATT ATGCTATTTTGTttcattcgattgacaaaaacGATATAGtgcaaagagaa aaatttctcaACGCTGAACAGATAGACAACATATTGACTTTAGTCAATGA AATTCCAGAAATACTTTCTACAAATTGGGAAGTTAATCAAACCATTACAG AAACAAACTCATATGCTTGGATCAATCATCCTGACGACCCATCGATTCAA GTATCTCTTACACAAGTAGGAAAAATCCAACTAGTGATCAAAGAACGCAA AGAAGATGGCTGCGGAATATTCTTATTCCTAACAGAGACATATAAACTGT TGAAACATCTCAACAAAATATATGCTTATTCAAAGACATTCAATGTCACA GCAAACAGCGAACAATACAGTGAcgactttttttaaagttataaCGACAA TTTATATATAGTCTTGAAAACAGCCTCCCAAGTTACATATATAACTGACA TgtagaaaatatattttatctAATCTTAATATTAATGTTTGCATATATCT GTATATCAATTATGTTTATAGAGAATACCTCATAATTATTAAAATCATAC ATTGAATTTACTTTTGTTCTTTGAAAACCTGTTTAAATTCATATGTTTAT CTATTCATAATTAGTCTCCTTCAAGTTCGCGATGGATAAACATCTCTTTA AACATCCGTTTAGCTTGCTATTGTCTGGTGGGAGAGCTAGTGGGAAAACT GAATTTACAAAGAAACTTTTAAGATACAGAAAGGATCTCATTGACCAACC GATTGATAGGATAATTTGGTTATATTCGAAACATCAGCCGCAATTATTCA ATGAACTGATGAGAATAGACAACAAAATTGAATATACTCTAGGCATTCCC GAAAATCTTAGCACCATGTTTGATAAGAACATGCATAATCTAATAATCCT AGATGATCTCATGGACGAGGGAGGTGAAAACAAATCTGTTGCACAATTAT TCACTCGAGGAAGGCATGATAACATGTCTGTCATATTCATAacacaaaat ttatttcatgCAAAGCAAAGAACAATAAGCCTTAATTCAGATTACATGAT AATCTTTAAAAACGTCAGAGATAAATCACAGTTCACAAATCTAGCAAAAC AATTTATGCCAAATGATATACATTTTATGAAATGGGTATATGAAGATGCT ACCAAAAATCCTCACTCTTATCTCTTTCTCGATTTAAAACCAAACAGCAA TGAAGATTTGAGAATAAGAACTAACATTTTACCAGATGAAGAACCTAAAT TTGTCTACATAAGATGAGAAATCACAATTTCTATTTCATTCATTTGTAAA AGATTGACGAATTAAGACATGAAAATGACGCAAAGAATGAAGCAACACGC CCATATGATACAAGCTATACATTCGTGTTCACCAAACGATcgtaaaattt tgttaaaacaCGCCAAACCGGAAGTTGTCAATGCACTTTGTGATTGTTTA ACAAATATAGTTCATGGAAATATACCTATctcaaaaacccaaaaaacaca actaagaagaaagaagaaaatcctTAAAGATCTTATAAATCCTAAAACTC CCACAGTTCGTAAAAGGTCATTGCTTGTGCAACACGGAGGAAGTATTATA TTAAAAGCTCTAGGTGGAATAGCAAAGTTTTTATTTGGACTATAAAATAT GAATAATAAATCATTCGCCAACAAAAAATATGTGTTGTTATCGCCAGAAG TATATGAAAATTTACTCGAGAAATCAGGAAACAAAAATGATTCAAACTTA CTGTTACCACCTGAGCGAGCAGCCATAACAGAATCagatagaaaaacaaa aagtgtTTGGGATCGAAAAGACATGCCAGACGATGAAAAAGTGAAAGAGT TTACCAAAGAGCTAAACTCATTGAGAAGATACAGAGAGGAACTTAGAAAA CCAAACCTTAAAAAACCAAATATACCTAAAACAAAAACGCTAGAAGTCAC TTCCAATAATCTAAAAAATGCACAAGACACTCAACCAAGAACAAAAGAAA GATCACTCGAAGAAACAGAAACAGCTACTAACGAAACTCGTGTTGGAGTA GAAGATATAAAGTTAACACTACCAAAAACATATCGCAAAAATGGACACCA AATCCTTTCATTCATCCAGGCAAATACTGACAAAATGAGCtggaataaaa acaaagagGTTACAATAGGTGGAACAACTTTGAATGGATCAAATATATCT GATCTTTTGATCGACACCCTTAccaacagaaaaaaatcaatatctcCATC TCAATTTAGAAACATTTTTTCCAAAGGGTTGGTAAACATTGAATTACCGA TGGAATGGGTAAAAAACgacgaaatgaaagaaatgatGGAAATGCAAAAT AAGGAAAACTATCTACATCcaattaaaaacaaaaggaaacGTTCACGATC AACACCATAccctttaaaactaaaaaacacTAAATCCAACACCCCAATCA AATGGCTATCATCAACCTCATATAACCGATAAAGCttctttttgaattca tttgttGTATACATTTCAAAGAAGATGGATGTTCTTCTGagaataagaaa ctttttcaggCGAACTAAATGTGTTTTAGTTTGTTGCGGATCCACACTGA TAATGGAACACAGTCAAATTGATGGTAAAcaaaatctgaagaaaaaataa tatattttgtaaataatgTCTTTaaccaaagaaaaagaaaacactctACA CAATTTGTATCATTCTTTAAAATCGCCtgcttcattttcatcttcttacA TCTTATACAAAGCAGCCAAAAAGAAACACCCTGATTTGACTTTGAAAGAT GTGAAAAAAATGGTTATCGAAAGATGGGGCATATACGTTACACTATCCTA TTAGAACGCACTATAAAACCAGAAGAGTCCTTGTTCATGGCATCGATCAT CAATGGCAGCTTGATCTGATTTCGATTGAGAACCTTTCTAAATATAATAA TGGACATAAATTTTTATTGGTATGCATTGACATTTTATCAAAGTTTGTCT GGGTCAGAGCATTAAAAAGCAAAAGCGCTCAAGAAATATACGATGCCCTG AAAGACATTTTCTCTAAAGGTAGAAAGCCACTCGTTATACAAACAGATCG GGGAAcagaatttttaaataaaaaagttcagAAACTGTTGAATGAAAACA ATATTAAATTCTTTACCAGCTTTAGTGAGCGCAAGGCGTCAGTTGTTGAG AGGGTAAATCGGACCATCAAGGGATTaatgtttaaatatttttcatcaCG TGAAACTAGAAAATACATCGATATCTTACAAGATCTAATATCTCGATATA ATAACGCATACCATAGATCGATAAAAACATCTCCAATTAAAGTCACAAAA GAGAACGAGCTGAAAATTTGGATGACACTTTACCCAAACCaaaaacatgt taaaaataACCCAACAGACTTTCAAATTGGCGATCCGGTCAGAATCACTC TCGAAAGAGGAACATTTCATAAAAGTTATTTAGAAGGCTGGAGCGAGGAG ATATTTTTCATATCTCATAAACTTCCAAAGACTCCAGTCGTCTACAAGGT GAAAGATCAGGCTGGTGAGCAGATCAAAGGAACGTTTTATAAACAAGAAC TTCAAAAGGTGAGCGAGCCTGACTTCTACAAGATAGAAAAGATCATCAGT CGTAAAAGACAGAAAAACAGAAAGTGGATTTATCTTGTGAAATGGAAAGG ATACCCTTCGAAATTTAATAGCTTTGTATCTGAAAAAGACCTAAAAGCTT TTGGAAAAGATGGATACGGATAAATTCTTCATTTCATTGCCCAGCGATAG TTCTATGAGTGTTTACCCTGATAATAAAATATCCAAGTACACTACGTATT TTCCAGATGAAATTAAAGTATCACCGACCCAGTGGAAAGTTGCGTTAAAA GAAATCATTTTTCCACATAGCTGGTACACAATTAAGGATGGTAGCAATAC AATTATAAAATTCTATTACAACATAACCGAAGATGAAACGCtaaatttga ccaagtctaccacACCTTATACATTTCTTAAAGATAAATCTGGGAAAGAT ACGTTGGCAAAATTGATTACGGTTAAACCAGGAATTTACCAAAATATACT AGATATTATAAAAGCTTTAAACAAGCAAGATGAAGGAGACATCAGACCAA TGGATTTTTCTTTAGATATAACGAGTAAAACATCTGTTACCATATTTAGA GATTGTACAATCAAATGGAATAACTCTGACATTGCTAAATGTTTTGGATT TGATCCGAGTGGCGACATATCTAGCATCTCAGCTCTTGATGAAAAGATAA CGATCATTTCAAATTCCATTGGAACAACTCAACCGTTAGAAATCATCTAT GTATACAGCGACATAGTAGAAAATCAACATGTAGGTGATTTTAAAGTGCC CTTGCTTAGAATCATTCCAATAAGATCAAAGTTTGGGGAAATAAATTGGG TGCGATTTGACAAGCCACAGTTTCTAAAGCTAAGCCGTGAGAATATcaac aatattgaaataaatataaGGGATAATTTAGGACAATTGGTTTCATTTGA ATCAGGCAGAGCTATAATCACGTTGGTATTTGAAAGAATATCTACAAGAT TTTATCAGTAAATAATATGTATCAAACTGGCTATGGTTTACCAGCTTATC GTGGGATAGTTATGCAAAGGGGATATGGCCTAGGAGGCTTATTCAGAGGA TTACTGAGAGCAGTGACGCCCAAGCTGAAGCAAGGACTTAAACAAGTAGG AAAAAAAGCGCTCAAAACAGGCTTGGAAGTAGTGAGCGATGTAAGCcaag gaaaaaaattaaaatcttctttaaaacgaagaacaatagaaaatgcTACA GAACTTTTTCAACCTTCCACTAAAAAAGCCAAGAAAAACCATGCAAACCC CATTGGTAAAAAGACACTCAAAGGGAAAGGACGAAGAAAACTCAACCGAA AGGCTAACACGCttggtattttataaaaaagaagatgTCAGTAAAAGACA AAAACCATATTGAATGTGCACTCTCGGACACAGACTTATTCACTCCAGTT TACGTTCAATCAGATATCGAAAGTAGCACCTTTGAAGAAGTTTATCCGAT AACAAACCTAAAAGACAACGGACCACTAGAGTTCATTATCAAAAACGCAA CCGACCTTTTTTTAGACTTGGTAAACACCTACATAAGAttggggttggtg taatttaagatgcacgatctaacgatttacgatgcacgattcgcgatccg tgcataaaatatgttaattcatgcgtaatcaTGCT

Coding sequence (CDS) from alignment at sc0001303:4371..11555

>TCONS_00035368 ID=TCONS_00035368|Name=TCONS_00035368|organism=Clytia hemisphaerica|type=CDS|length=852bp|location=Sequence derived from alignment at sc0001303:4371..11555 (Clytia hemisphaerica)
ATGGATACGGATAAATTCTTCATTTCATTGCCCAGCGATAGTTCTATGAG
TGTTTACCCTGATAATAAAATATCCAAGTACACTACGTATTTTCCAGATG
AAATTAAAGTATCACCGACCCAGTGGAAAGTTGCGTTAAAAGAAATCATT
TTTCCACATAGCTGGTACACAATTAAGGATGGTAGCAATACAATTATAAA
ATTCTATTACAACATAACCGAAGATGAAACGCtaaatttgaccaagtcta
ccacACCTTATACATTTCTTAAAGATAAATCTGGGAAAGATACGTTGGCA
AAATTGATTACGGTTAAACCAGGAATTTACCAAAATATACTAGATATTAT
AAAAGCTTTAAACAAGCAAGATGAAGGAGACATCAGACCAATGGATTTTT
CTTTAGATATAACGAGTAAAACATCTGTTACCATATTTAGAGATTGTACA
ATCAAATGGAATAACTCTGACATTGCTAAATGTTTTGGATTTGATCCGAG
TGGCGACATATCTAGCATCTCAGCTCTTGATGAAAAGATAACGATCATTT
CAAATTCCATTGGAACAACTCAACCGTTAGAAATCATCTATGTATACAGC
GACATAGTAGAAAATCAACATGTAGGTGATTTTAAAGTGCCCTTGCTTAG
AATCATTCCAATAAGATCAAAGTTTGGGGAAATAAATTGGGTGCGATTTG
ACAAGCCACAGTTTCTAAAGCTAAGCCGTGAGAATATcaacaatattgaa
ataaatataaGGGATAATTTAGGACAATTGGTTTCATTTGAATCAGGCAG
AGCTATAATCACGTTGGTATTTGAAAGAATATCTACAAGATTTTATCAGT
AA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_020660XLOC_020660Clytia hemisphaericagene
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00035368-proteinTCONS_00035368-proteinClytia hemisphaericapolypeptide
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00035368-exon-sc0001303-1491911889:4371..11555TCONS_00035368-exon-sc0001303-1491911889:4371..11555Clytia hemisphaericaexon
TCONS_00035368-exon-sc0001303-1510915933:4371..11555TCONS_00035368-exon-sc0001303-1510915933:4371..11555Clytia hemisphaericaexon
TCONS_00035368-exon-sc0001303-1575043694:4371..11555TCONS_00035368-exon-sc0001303-1575043694:4371..11555Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0001303supercontigsc0001303:4371..11555 .
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.204968 0.245722 0.239183 0.332321 0.155375 0.0998052 0.281586 0.278961 0.47631 0.257707 0.61656 0.868661 0.193437 0.149418 0.110011 0.171057 0.210989 0.17788 0.119377 0.228488 1.4064 1.12322 0.135051 0.245575 0.363393 0.449538 0.644792 0.54384 0.246163 0.18146
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00035368 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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