TCONS_00035353 (transcript) - C. hemisphaerica

Overview
NameTCONS_00035353
Unique NameTCONS_00035353
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length119

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00035353 ID=TCONS_00035353|Name=TCONS_00035353|organism=Clytia hemisphaerica|type=transcript|length=119bp
GCGGCCGGTAACGTCATCACGCGCGGTCTTTTTTATCACGAGTCTTGTCG
AGTCTTGTCGAGTTTATGTCAATTCCAACTACTACTTTACgactattttt
tatttattttttctgaaac
Run BLAST on NCBI

transcript from alignment at sc0001301:16610..16728

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00035353 ID=TCONS_00035353|Name=TCONS_00035353|organism=Clytia hemisphaerica|type=transcript|length=119bp|location=Sequence derived from alignment at sc0001301:16610..16728 (Clytia hemisphaerica)
gtttcagaaaaaataaataaaaaatagtcGTAAAGTAGTAGTTGGAATTG
ACATAAACTCGACAAGACTCGACAAGACTCGTGATAAAAAAGACCGCGCG
TGATGACGTTACCGGCCGC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_020647XLOC_020647Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00035353-exon-sc0001301-1491911889:16610..16728TCONS_00035353-exon-sc0001301-1491911889:16610..16728Clytia hemisphaericaexon
TCONS_00035353-exon-sc0001301-1510915933:16610..16728TCONS_00035353-exon-sc0001301-1510915933:16610..16728Clytia hemisphaericaexon
TCONS_00035353-exon-sc0001301-1575043694:16610..16728TCONS_00035353-exon-sc0001301-1575043694:16610..16728Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0001301supercontigsc0001301:16610..16728 .
Expression
No biomaterial libraries express this feature.
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00035353 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
back to top