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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00035348 ID=TCONS_00035348|Name=TCONS_00035348|organism=Clytia hemisphaerica|type=transcript|length=1249bp
CTGTACATAAGTTAGATACATAGTTAAATAAATTAGTTTAAAACATGGTT
AAAATGATAAATGATAATATTGAGCATTGTATTAAAATACTATCATCTAA
TTGTTTgttgattatctttttattattgttgttattattttatttattac
ttTATCAAAAACATCATTATTACTAAAAGTCATTCACTAATATTCCAAGA
caaattattgattttttatctCCCATGTAAAAATCTTCAGAGGAGCATTT
GGTACACCATCTCTGATAACCAGTGCCTAAATAATTCCAGTTCAGCTCAA
GACATTTAACCAATTGAGTGGGATGCAAAATAATAAAAGTTGTACTTTCA
AGTAATTTTCGGTTTATATCAGTTACAACAAAGTCATTTGTGGCAGGGTA
ACTACATTCCCCTATTTTTGATACAAAATAGAGTGCTTCATGACAAAATT
CAAActcttttcttataaaaacgtatTGGTTCGTAACATATTGTGCGGAG
TTTTCCATCAAAATAGATAAATCGGAATACCATTCACCATAGGATTTGTA
AAGTTCAAAATCTGTTGTTGATTtcttctgaaaaaatctttttacgcCCC
ATATCATTTTGTCTATCTTGGGAATAAATACAGAGTCAACTAAATTTTTA
TCAGTAAGATATGGTACAGGTTTAATCCTTTTCAATTCTCCTGCATCTTC
TGAAGACTTTGAATGAGGTTCAGTATattcaatattattttgtttgtttt
ttaaaacctgcaactttaattgattctcattttcaatcttcatgATATTC
ACTTTATTCTCATTTTCAAGTACCAAAATCTTGAGTTTATTTTCAAGTTC
AAGAATCTTGATCTGTTGTTCATGATTTGATTTCCTTAATCTCATGTTTT
CTTCCCTGAGCTTTTGATTTTCtgcttcaaaataattttcttgtGAAGTT
CTACTTGTATTTTCATGAGCACAATGGGCATTGTCCATGATTTATCTTTA
CCTGCTTCATTAAGATTCTTAGATTGAATGGGATAGGATGGATCCCAGTA
TGAAGTGTTGTTGTAAACTGATTCGATTTCAGAAATAATTTTGCTCAAGA
TCTGTCAAGATTTATATTGATGGCTTATTACATTCtatattcaatttaat
tttatgACATGACTATATAaactacacactttttttataacttctataag
aatatcagggtgagatttcagagttagaacaatagaaaaataagaataa Run BLAST on NCBI protein sequence of TCONS_00035348-protein >TCONS_00035348-protein ID=TCONS_00035348-protein|Name=TCONS_00035348-protein|organism=Clytia hemisphaerica|type=polypeptide|length=271bp
MDNAHCAHENTSRTSQENYFEAENQKLREENMRLRKSNHEQQIKILELEN
KLKILVLENENKVNIMKIENENQLKLQVLKNKQNNIEYTEPHSKSSEDAG
ELKRIKPVPYLTDKNLVDSVFIPKIDKMIWGVKRFFQKKSTTDFELYKSY
GEWYSDLSILMENSAQYVTNQYVFIRKEFEFCHEALYFVSKIGECSYPAT
NDFVVTDINRKLLESTTFIILHPTQLVKCLELNWNYLGTGYQRWCTKCSS
EDFYMGDKKSIICLGILVNDF Run BLAST on NCBI transcript from alignment at sc0001298:45219..46467 Legend: exonfive_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00035348 ID=TCONS_00035348|Name=TCONS_00035348|organism=Clytia hemisphaerica|type=transcript|length=1249bp|location=Sequence derived from alignment at sc0001298:45219..46467 (Clytia hemisphaerica)
ttattcttatttttctattgttctaactctgaaatctcaccctgatattc
ttatagaagttataaaaaaagtgtgtagttTATATAGTCATGTcataaaa
ttaaattgaatataGAATGTAATAAGCCATCAATATAAATCTTGACAGAT
CTTGAGCAAAATTATTTCTGAAATCGAATCAGTTTACAACAACACTTCAT
ACTGGGATCCATCCTATCCCATTCAATCTAAGAATCTTAATGAAGCAGGT
AAAGATAAATCATGGACAATGCCCATTGTGCTCATGAAAATACAAGTAGA
ACTTCacaagaaaattattttgaagcaGAAAATCAAAAGCTCAGGGAAGA
AAACATGAGATTAAGGAAATCAAATCATGAACAACAGATCAAGATTCTTG
AACTTGAAAATAAACTCAAGATTTTGGTACTTGAAAATGAGAATAAAGTG
AATATcatgaagattgaaaatgagaatcaattaaagttgcaggttttaaa
aaacaaacaaaataatattgaatATACTGAACCTCATTCAAAGTCTTCAG
AAGATGCAGGAGAATTGAAAAGGATTAAACCTGTACCATATCTTACTGAT
AAAAATTTAGTTGACTCTGTATTTATTCCCAAGATAGACAAAATGATATG
GGgcgtaaaaagattttttcagaagaAATCAACAACAGATTTTGAACTTT
ACAAATCCTATGGTGAATGGTATTCCGATTTATCTATTTTGATGGAAAAC
TCCGCACAATATGTTACGAACCAatacgtttttataagaaaagagTTTGA
ATTTTGTCATGAAGCACTCTATTTTGTATCAAAAATAGGGGAATGTAGTT
ACCCTGCCACAAATGACTTTGTTGTAACTGATATAAACCGAAAATTACTT
GAAAGTACAACTTTTATTATTTTGCATCCCACTCAATTGGTTAAATGTCT
TGAGCTGAACTGGAATTATTTAGGCACTGGTTATCAGAGATGGTGTACCA
AATGCTCCTCTGAAGATTTTTACATGGGagataaaaaatcaataatttgT
CTTGGAATATTAGTGAATGACTTTTAGTAATAATGATGTTTTTGATAaag
taataaataaaataataacaacaataataaaaagataatcaacAAACAAT
TAGATGATAGTATTTTAATACAATGCTCAATATTATCATTTATCATTTTA
ACCATGTTTTAAACTAATTTATTTAACTATGTATCTAACTTATGTACAG Coding sequence (CDS) from alignment at sc0001298:45219..46467 >TCONS_00035348 ID=TCONS_00035348|Name=TCONS_00035348|organism=Clytia hemisphaerica|type=CDS|length=816bp|location=Sequence derived from alignment at sc0001298:45219..46467 (Clytia hemisphaerica)
ATGGACAATGCCCATTGTGCTCATGAAAATACAAGTAGAACTTCacaaga
aaattattttgaagcaGAAAATCAAAAGCTCAGGGAAGAAAACATGAGAT
TAAGGAAATCAAATCATGAACAACAGATCAAGATTCTTGAACTTGAAAAT
AAACTCAAGATTTTGGTACTTGAAAATGAGAATAAAGTGAATATcatgaa
gattgaaaatgagaatcaattaaagttgcaggttttaaaaaacaaacaaa
ataatattgaatATACTGAACCTCATTCAAAGTCTTCAGAAGATGCAGGA
GAATTGAAAAGGATTAAACCTGTACCATATCTTACTGATAAAAATTTAGT
TGACTCTGTATTTATTCCCAAGATAGACAAAATGATATGGGgcgtaaaaa
gattttttcagaagaAATCAACAACAGATTTTGAACTTTACAAATCCTAT
GGTGAATGGTATTCCGATTTATCTATTTTGATGGAAAACTCCGCACAATA
TGTTACGAACCAatacgtttttataagaaaagagTTTGAATTTTGTCATG
AAGCACTCTATTTTGTATCAAAAATAGGGGAATGTAGTTACCCTGCCACA
AATGACTTTGTTGTAACTGATATAAACCGAAAATTACTTGAAAGTACAAC
TTTTATTATTTTGCATCCCACTCAATTGGTTAAATGTCTTGAGCTGAACT
GGAATTATTTAGGCACTGGTTATCAGAGATGGTGTACCAAATGCTCCTCT
GAAGATTTTTACATGGGagataaaaaatcaataatttgTCTTGGAATATT
AGTGAATGACTTTTAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this transcript:
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00035348-exon-sc0001298-1491911889:45219..46467 | TCONS_00035348-exon-sc0001298-1491911889:45219..46467 | Clytia hemisphaerica | exon |
| TCONS_00035348-exon-sc0001298-1510915933:45219..46467 | TCONS_00035348-exon-sc0001298-1510915933:45219..46467 | Clytia hemisphaerica | exon |
| TCONS_00035348-exon-sc0001298-1575043694:45219..46467 | TCONS_00035348-exon-sc0001298-1575043694:45219..46467 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0001298 | supercontig | sc0001298:45219..46467 . |
Blast
The following BLAST results are available for this feature:
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