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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00035345 ID=TCONS_00035345|Name=TCONS_00035345|organism=Clytia hemisphaerica|type=transcript|length=1011bp
AGCCACGGAGAGGGGCACGAACAATACACCGATGAACAACAGGCTGGCTT
GCACCACAGAATTCAAAACCGAAGAGGCAAAGGTAAGAAAAATTCTGTCA
AACTTCACAGAACCTCTCTCCAGTCAAGCAAAACCTCTGCTGACAAACGG
GGAGTCacaaaaatttgggaaaatacACCCAAGTATAAAAAACCTCATAG
AGGATTTATCAAATCCCCAGTTGACACAGACTGGAAGGACaggatttttt
caaaacaattggtCAAAACTGACTCAGGACAAATTCATCTTGGAAACAGT
TTCAGGCTTAGTGATCCCAATAATAGGGAAGCCGATTCAAAAAACAAGAC
CACAACAAATAAATTCAAATTCCAAAATGAAAGCCTTGATAAGAGCAGAG
ATAAGAACCTTACTGGAGAAAGGGGCTGTGAAGAGAGTTCTAAACACAGA
AGGTCAATTtttgtccactctatttttaaaagagaaaaaggaaCCAGGAA
AATACAGGCCAGTTATAAATCTAAAGGAACTGAACTCATACATTCcatat
caaaaattcaaaatggaaacTTTGAAGGATGTGAAAAACATCCTCCAGAA
GGGGGACTTCATGGTCAAAATCGACCTGAAGGACGCTTATTTTGCAATAC
CGTTGCATCCCCAATCAAAGAAGTATGTGAGATTCAGCTGGGAAGGAAGC
CTATACGAATTCCAATGCCTGATGTTCGGATTGGGACCAGCTCCCAGGTT
CTTCACAAAACTACTCAAAGTACCAATTTCACTGTTGAGAAGGTTACAAA
TAAGAGTCCTCATATACATAGACGACCTATTGATAGTAGCATGGTCGAAA
GGAGAAGCAATCTTCTCAAGGGACACAACAATCTTTCTTCTGGAGAATCT
AGGGTTTACAATAAATCTAGAGAAGTCTGTACTGGTACCAAACCAACAGA
TGGAGTATCTGGGAGTCTTAATAAACAGCTGCGATATGACCTTCAAAGTC
CCACTAGAGAA Run BLAST on NCBI protein sequence of TCONS_00035345-protein >TCONS_00035345-protein ID=TCONS_00035345-protein|Name=TCONS_00035345-protein|organism=Clytia hemisphaerica|type=polypeptide|length=337bp
SHGEGHEQYTDEQQAGLHHRIQNRRGKGKKNSVKLHRTSLQSSKTSADKR
GVTKIWENTPKYKKPHRGFIKSPVDTDWKDRIFSKQLVKTDSGQIHLGNS
FRLSDPNNREADSKNKTTTNKFKFQNESLDKSRDKNLTGERGCEESSKHR
RSIFVHSIFKREKGTRKIQASYKSKGTELIHSISKIQNGNFEGCEKHPPE
GGLHGQNRPEGRLFCNTVASPIKEVCEIQLGRKPIRIPMPDVRIGTSSQV
LHKTTQSTNFTVEKVTNKSPHIHRRPIDSSMVERRSNLLKGHNNLSSGES
RVYNKSREVCTGTKPTDGVSGSLNKQLRYDLQSPTRE Run BLAST on NCBI transcript from alignment at sc0001298:1..1011 Legend: exonCDS Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00035345 ID=TCONS_00035345|Name=TCONS_00035345|organism=Clytia hemisphaerica|type=transcript|length=1011bp|location=Sequence derived from alignment at sc0001298:1..1011 (Clytia hemisphaerica)
TTCTCTAGTGGGACTTTGAAGGTCATATCGCAGCTGTTTATTAAGACTCC
CAGATACTCCATCTGTTGGTTTGGTACCAGTACAGACTTCTCTAGATTTA
TTGTAAACCCTAGATTCTCCAGAAGAAAGATTGTTGTGTCCCTTGAGAAG
ATTGCTTCTCCTTTCGACCATGCTACTATCAATAGGTCGTCTATGTATAT
GAGGACTCTTATTTGTAACCTTCTCAACAGTGAAATTGGTACTTTGAGTA
GTTTTGTGAAGAACCTGGGAGCTGGTCCCAATCCGAACATCAGGCATTGG
AATTCGTATAGGCTTCCTTCCCAGCTGAATCTCACATACTTCTTTGATTG
GGGATGCAACGGTATTGCAAAATAAGCGTCCTTCAGGTCGATTTTGACCA
TGAAGTCCCCCTTCTGGAGGATGTTTTTCACATCCTTCAAAgtttccatt
ttgaatttttgatatgGAATGTATGAGTTCAGTTCCTTTAGATTTATAAC
TGGCCTGTATTTTCCTGGttcctttttctcttttaaaaatagagtggaca
aaAATTGACCTTCTGTGTTTAGAACTCTCTTCACAGCCCCTTTCTCCAGT
AAGGTTCTTATCTCTGCTCTTATCAAGGCTTTCATTTTGGAATTTGAATT
TATTTGTTGTGGTCTTGTTTTTTGAATCGGCTTCCCTATTATTGGGATCA
CTAAGCCTGAAACTGTTTCCAAGATGAATTTGTCCTGAGTCAGTTTTGac
caattgttttgaaaaaatcctGTCCTTCCAGTCTGTGTCAACTGGGGATT
TGATAAATCCTCTATGAGGTTTTTTATACTTGGGTgtattttcccaaatt
tttgtGACTCCCCGTTTGTCAGCAGAGGTTTTGCTTGACTGGAGAGAGGT
TCTGTGAAGTTTGACAGAATTTTTCTTACCTTTGCCTCTTCGGTTTTGAA
TTCTGTGGTGCAAGCCAGCCTGTTGTTCATCGGTGTATTGTTCGTGCCCC
TCTCCGTGGCT Coding sequence (CDS) from alignment at sc0001298:1..1011 >TCONS_00035345 ID=TCONS_00035345|Name=TCONS_00035345|organism=Clytia hemisphaerica|type=CDS|length=1011bp|location=Sequence derived from alignment at sc0001298:1..1011 (Clytia hemisphaerica)
TTCTCTAGTGGGACTTTGAAGGTCATATCGCAGCTGTTTATTAAGACTCC
CAGATACTCCATCTGTTGGTTTGGTACCAGTACAGACTTCTCTAGATTTA
TTGTAAACCCTAGATTCTCCAGAAGAAAGATTGTTGTGTCCCTTGAGAAG
ATTGCTTCTCCTTTCGACCATGCTACTATCAATAGGTCGTCTATGTATAT
GAGGACTCTTATTTGTAACCTTCTCAACAGTGAAATTGGTACTTTGAGTA
GTTTTGTGAAGAACCTGGGAGCTGGTCCCAATCCGAACATCAGGCATTGG
AATTCGTATAGGCTTCCTTCCCAGCTGAATCTCACATACTTCTTTGATTG
GGGATGCAACGGTATTGCAAAATAAGCGTCCTTCAGGTCGATTTTGACCA
TGAAGTCCCCCTTCTGGAGGATGTTTTTCACATCCTTCAAAgtttccatt
ttgaatttttgatatgGAATGTATGAGTTCAGTTCCTTTAGATTTATAAC
TGGCCTGTATTTTCCTGGttcctttttctcttttaaaaatagagtggaca
aaAATTGACCTTCTGTGTTTAGAACTCTCTTCACAGCCCCTTTCTCCAGT
AAGGTTCTTATCTCTGCTCTTATCAAGGCTTTCATTTTGGAATTTGAATT
TATTTGTTGTGGTCTTGTTTTTTGAATCGGCTTCCCTATTATTGGGATCA
CTAAGCCTGAAACTGTTTCCAAGATGAATTTGTCCTGAGTCAGTTTTGac
caattgttttgaaaaaatcctGTCCTTCCAGTCTGTGTCAACTGGGGATT
TGATAAATCCTCTATGAGGTTTTTTATACTTGGGTgtattttcccaaatt
tttgtGACTCCCCGTTTGTCAGCAGAGGTTTTGCTTGACTGGAGAGAGGT
TCTGTGAAGTTTGACAGAATTTTTCTTACCTTTGCCTCTTCGGTTTTGAA
TTCTGTGGTGCAAGCCAGCCTGTTGTTCATCGGTGTATTGTTCGTGCCCC
TCTCCGTGGCT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00035345-exon-sc0001298-1491911889:1..1011 | TCONS_00035345-exon-sc0001298-1491911889:1..1011 | Clytia hemisphaerica | exon |
| TCONS_00035345-exon-sc0001298-1510915933:1..1011 | TCONS_00035345-exon-sc0001298-1510915933:1..1011 | Clytia hemisphaerica | exon |
| TCONS_00035345-exon-sc0001298-1575043694:1..1011 | TCONS_00035345-exon-sc0001298-1575043694:1..1011 | Clytia hemisphaerica | exon |
The following polypeptide feature(s) derives from this transcript:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0001298 | supercontig | sc0001298:1..1011 . |
Blast
The following BLAST results are available for this feature:
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