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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00035327 ID=TCONS_00035327|Name=TCONS_00035327|organism=Clytia hemisphaerica|type=transcript|length=1214bp
agtttttcgagagctttcgaatggtatacttgataatgtctgaaaatgag
tttgaaattttcaaaaaatttcgcccttaNttgataatgtctgaaaatga
gtttgaaattttcaaaaaatttcgcccttagggttttgccttcgaaaaaa
agaaatgtcccaaaaaagggatgttccaccagtgggattttaggggaatt
ttccctgaggcataaccatccatAACGACCCCActagtataattttccAC
TAGCATGATAtctttggccaaaatttccagTGAAAGGATGCATTATCTTG
AAACTAAATCATTTCCAGTGGGAGGGGCCCAAAGGGTCTGTTACGCTAGA
ATCCCGtagctgaaaaattaaaaaaaaatcaaaatcgaaatcAAATTGCA
TATAATTCATACATATGGAACGCCTGAAGGGTTTCTCATTCGTAAGTACT
CAAGATAAACTTTTACAACAGAATAGGATGACCTAactaaattcttcaaa
aaatctcATTCCCTGTGAATATAAGGAACTCTTGGTCGACTGATTGCCTC
ggaggggcttttgttgctccACGAAGCANACTCTTGGTCGACTGATTGCC
TCggaggggcttttgttgctccACGAAGCAGAGATACTCGCCAGAAAAat
cttgttgttgtttttcccgatcgagaagaaAAGGACGCAGAATATAGCGC
ATTTGTtgcatgtttttgttttgaaaatctttgaattgAAGCTTTCCTTT
TAATATAGTTACTGTATTTTCTATCAACGCGcggagaaaaataatttcgt
tTTCCCTCTAGCCCATCAGAATTTTCGCGTGCTGGGTAAGAAGAAAGCCA
TGTAAGACGTATTCCAAGTCCCTTCGCGGGTTTAATCggggaaacaaaaa
aatctaatCAATCTCTTATtccgaaatttgaaaatttaaagtacTTTAGT
TAGATTTAACGCTATAACGACTTCAGGCGACAAAATCATTGCAGAATTCA
TGATCGAGAAAGTCTGCTCTGCGGGGCATTCCTAGCAGCGAAAACTACGT
TTTACTGAGTTTTTGCTTTAAATTACTTCTTCTAGTCATGAAAGTTttac
catatttgatttttaatataTTCTCTCTCGTATCATATTGGTGATAGGGT
TTGAAATATCTCTCTACAGACTTCCTCTACAgacttaattttttctaatc
agttttctttcttc Run BLAST on NCBI transcript from alignment at sc0001297:71562..72775 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00035327 ID=TCONS_00035327|Name=TCONS_00035327|organism=Clytia hemisphaerica|type=transcript|length=1214bp|location=Sequence derived from alignment at sc0001297:71562..72775 (Clytia hemisphaerica)
gaagaaagaaaactgattagaaaaaattaagtcTGTAGAGGAAGTCTGTA
GAGAGATATTTCAAACCCTATCACCAATATGATACGAGAGAGAAtatatt
aaaaatcaaatatggtaaAACTTTCATGACTAGAAGAAGTAATTTAAAGC
AAAAACTCAGTAAAACGTAGTTTTCGCTGCTAGGAATGCCCCGCAGAGCA
GACTTTCTCGATCATGAATTCTGCAATGATTTTGTCGCCTGAAGTCGTTA
TAGCGTTAAATCTAACTAAAgtactttaaattttcaaatttcggaATAAG
AGATTGattagatttttttgtttccccGATTAAACCCGCGAAGGGACTTG
GAATACGTCTTACATGGCTTTCTTCTTACCCAGCACGCGAAAATTCTGAT
GGGCTAGAGGGAAaacgaaattatttttctccgCGCGTTGATAGAAAATA
CAGTAACTATATTAAAAGGAAAGCTTcaattcaaagattttcaaaacaaa
aacatgcaACAAATGCGCTATATTCTGCGTCCTTttcttctcgatcggga
aaaacaacaacaagatTTTTCTGGCGAGTATCTCTGCTTCGTggagcaac
aaaagcccctccGAGGCAATCAGTCGACCAAGAGTNTGCTTCGTggagca
acaaaagcccctccGAGGCAATCAGTCGACCAAGAGTTCCTTATATTCAC
AGGGAATgagattttttgaagaatttagtTAGGTCATCCTATTCTGTTGT
AAAAGTTTATCTTGAGTACTTACGAATGAGAAACCCTTCAGGCGTTCCAT
ATGTATGAATTATATGCAATTTgatttcgattttgatttttttttaattt
ttcagctaCGGGATTCTAGCGTAACAGACCCTTTGGGCCCCTCCCACTGG
AAATGATTTAGTTTCAAGATAATGCATCCTTTCActggaaattttggcca
aagaTATCATGCTAGTggaaaattatactagTGGGGTCGTTatggatggt
tatgcctcagggaaaattcccctaaaatcccactggtggaacatcccttt
tttgggacatttctttttttcgaaggcaaaaccctaagggcgaaattttt
tgaaaatttcaaactcattttcagacattatcaaNtaagggcgaaatttt
ttgaaaatttcaaactcattttcagacattatcaagtataccattcgaaa
gctctcgaaaaact
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00035327-exon-sc0001297-1491911889:71562..72775 | TCONS_00035327-exon-sc0001297-1491911889:71562..72775 | Clytia hemisphaerica | exon |
| TCONS_00035327-exon-sc0001297-1510915933:71562..72775 | TCONS_00035327-exon-sc0001297-1510915933:71562..72775 | Clytia hemisphaerica | exon |
| TCONS_00035327-exon-sc0001297-1575043694:71562..72775 | TCONS_00035327-exon-sc0001297-1575043694:71562..72775 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0001297 | supercontig | sc0001297:71562..72775 . |
Blast
The following BLAST results are available for this feature:
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