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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00035320 ID=TCONS_00035320|Name=TCONS_00035320|organism=Clytia hemisphaerica|type=transcript|length=268bp
GTTTCAGAAAAACGAAACAAAAAAAAATTCAAATAAATAGTAGATGCAAC
ACTAATAAAACCCGAAACAAAAAATAAAATTACTAAATATAAAGATATGG
TATGGACAATAGACAATGGTGGACCCATGTTGGCAATGTTATGGCTCATG
ATACACTTGCAAGTTGAAAAAGGAGaaaaaacGTGTTCACTGCAATACAA
AAGATGACCTTTGGACTTTAAATTGGTATTGTCCCGTTAAATGTGAACTT
ATCCGTAGCGTCAATAAG Run BLAST on NCBI transcript from alignment at sc0001297:3969..6409- Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00035320 ID=TCONS_00035320|Name=TCONS_00035320|organism=Clytia hemisphaerica|type=transcript|length=2441bp|location=Sequence derived from alignment at sc0001297:3969..6409- (Clytia hemisphaerica)
GTTTCAGAAAAACGAAACAAAAAAAAATTCAAATAAATAGTAGATGCAAC
ACTAATAAAACCCGAAACAAAAAATAAAATTACTAAATATAAAGATATGG
TATGGACAATAGACAATGGTGGACCCATGTTGGCAATGTTATGGCTCATG
ATACACTTGCAAGTTGAAAAAGGAGGTATGTATACACGGTCATATTTTTT
AAAGATACTACTTCTCGTTGGGATGAAAATTTCTACGGAAATCCTAACGG
AGAAATTCTATTGTCTTCAGCTCAAAATTTCCATTTGGGATGGTTTTGGA
ATGAATTTTTCCCTTTTAATTTGAAGTAGGGACAAAATCAAAGGCAATTT
CCCCATTGTTGGTTGTTTTCCAACCAAGACGAGATTGTAGACCATTTTTC
AAATTCTGACAGTTTTCAATTTGTGAATACAATTATTTACTTTATATATA
AGGATTCGCCTATGGAACAGCAGCGGTTTTTCTCTACATTTTTTAAAAAC
ATCAAATACAAATTACTTGATTACCAAATTACCAAAAGTAATTACGAGCT
TGATGTATATCAGAGTATACTACCCAGGGGGGTACTTAGGCAAATGGAGG
GTACGGTATGTGCCACCCTTAAGGGTACCTTTTTTGGAGTTCCAAAGTCC
CGCTAAGGGTCCGAAGAATCAGAAAATCGAATCTCAGTCCCACTAAGGGT
CGGAAATATAGGAAAATTTCAACTATTTACCCCCGGAAATATCGAAATTT
GGTCAAAAACGGTCAGATTTGTCCCGATAAGTGTCGTAAAATTCACAAAA
ATTTCCTTTTATTTCTCCTTTTTAGTCCCGGTAAGGGTCCAAGGGTCGAA
ATTCGGCCGGCACTCTCCCCCCGTCAGCTCGCAACCCTAGTACCATCCCC
TCCCCCGGGCCCGGGGGGGGTTTACTACAACTTATAAAGCATGAAATTTC
AAGTATTCATTTTGTAACTGCTCGCTAAAGGTTGACTATTTTTGCTATAT
TTTGCTATATTTTATTGTTTACCTCTTTTAACCATTGCATACGATATCAT
ATATTTGTTGAAATGAAAATTGAATCCCTCATTGCTATGGTTACAGATTC
GCTGACGTCATTCATGTACAGCAATGTCAAGTGTTGGGGAGGGGACACTG
CACGTATTATTTTGCATAGATACCAAAATTTCAAAATTGTTTCTGGAATC
ATGTAACCAAGTTTGAATGTTAATCCTCATTTTCGTATTTTCTTGAGTTA
GTCGAGATCGAATTAGGTTTCTGTTCTATGGACTCGATATGGACCTATCC
GACCCTTATTATACCAAAAAAAACTCAATGGGTTTCATTTTTAAGAAAAT
TTGTCTTTTAGTTTTTCAGAGATATATACTCGCGTTGGACGCGTAAATTT
GAAATGCATTTGACATTTGACAATCTAACTAAAAGTTAACTTNTGTCTTT
TAGTTTTTCAGAGATATATACTCGCGTTGGACGCGTAAATTTGAAATGCA
TTTGACATTTGACAATCTAACTAAAAGTTAACTTTGTCTCGCCATAATCG
AAAAAAAAACAGGCATTTAGAATTTTCAAAACGAAAGCCTGTCTCAATAG
ATAAAAAATGCTGTAACTTTCGATAGAGTTCGAATTTTTTATTGGAATTG
TCCTTGTTGAGAAGATATGCATAAGTGGAATATCAAAGAAAAGAAAAAAA
TCAAAAAATATCTGAAAATGAAGATTGAAAATGAAGAAAAAATCAACTTC
TTCAATAACTACCAATCGTATGATTCCTTGATCTTTGAATATCATTATTG
AAGATCATTAATGTGAACATTTTTCATTCAATCGAAAGATATGGCCCAAA
TTTTATCACTGATTGACTTCCGAAAGCCATAAAAAAACCTCAAAAAAGAG
CCCTTTCTCAAGTCAGCCAGAAAAAGATTTTCAACCGTAATTTTTGACTG
AATAGAGTTTTTTTCGCATTCATGAGGCTCGAAGGTTTGAGATTTTCTGA
TACAAAAATGAAGATCGTAGCTCTATTCTACAAGAAGTTGATTTTCCTCT
TTTTCATTTGTCATCTTCATTTTTTCATGTTTTTGAATTTTTTCTTTTTC
GATGATATTCCACTCGGGATTGTCTTTTTAACGAGCTCAAAACCTCTACG
TAACTCGAAACCTATCAAAAGTTATAGCCTTGTTTATCTCTGCTTCAAAT
TAAATTGGGACAGACTTTAGCCAAACAATAATAACTAAAAATAAAATATT
CAGATCGTTGTTGGAAATTTGGCCTAGATATTCTACAATTCAATATTATG
AAATTTGACTTTTGAAAAAACTTCAAATATTGTAGCTTCTTTTTACAGAA
AAAACGTGTTCACTGCAATACAAAAGATGACCTTTGGACTTTAAATTGGT
ATTGTCCCGTTAAATGTGAACTTATCCGTAGCGTCAATAAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00035320-exon-sc0001297-1575043694:6235..6409 | TCONS_00035320-exon-sc0001297-1575043694:6235..6409 | Clytia hemisphaerica | exon |
| TCONS_00035320-exon-sc0001297-1575043694:3969..4061 | TCONS_00035320-exon-sc0001297-1575043694:3969..4061 | Clytia hemisphaerica | exon |
| TCONS_00035320-exon-sc0001297-1510915933:6235..6409 | TCONS_00035320-exon-sc0001297-1510915933:6235..6409 | Clytia hemisphaerica | exon |
| TCONS_00035320-exon-sc0001297-1510915933:3969..4061 | TCONS_00035320-exon-sc0001297-1510915933:3969..4061 | Clytia hemisphaerica | exon |
| TCONS_00035320-exon-sc0001297-1491911889:6235..6409 | TCONS_00035320-exon-sc0001297-1491911889:6235..6409 | Clytia hemisphaerica | exon |
| TCONS_00035320-exon-sc0001297-1491911889:3969..4061 | TCONS_00035320-exon-sc0001297-1491911889:3969..4061 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0001297 | supercontig | sc0001297:3969..6409 - |
Blast
The following BLAST results are available for this feature:
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