TCONS_00035319 (transcript) - C. hemisphaerica

Overview
NameTCONS_00035319
Unique NameTCONS_00035319
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length743

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00035319 ID=TCONS_00035319|Name=TCONS_00035319|organism=Clytia hemisphaerica|type=transcript|length=743bp
CAAGAGCGTTGTCAACAAGATCTTGACAACACATTTTATAATGCTTTTAT
TGTTATCATATAAACATCGCCTAATCTTAAGGTGTTCAATTTTATTGTTC
TTTGACGCTGAAACATATTCTATCGAACACGATTGGCCATTATTAACCTT
CACTATTTTGTTATGCTAATGAAGTCTATTGTTATGCCACTTGCAAATTA
TATGGCTATAAATTCTGGAACTCAGATTATTTTAATCATCTTATCTTTAT
CATTCTTGATATTCTTACAAGACTTAGAAGACGCTTCATTTGGAATCAGA
ATCAAATCGcatttttacaCTTTCAGTATCACTATGAAGTCCATTATGAT
TTTTGCTGCCATCTTTGCTTTATGTTTGGTTGTCAATGGAAACCCAATGA
AAGAACGATTCAACCGTCAGCCGACGGAGTTCATGGAAGAAGTCTATCAA
GATGGAGCTATTGCAAAACGGGCTGACAGAACTGACAATCAACTGTTGAA
AAGTATCTGTTACTACCAATGCTTAGAAACCAATAAAGTTGCCGGAACGA
CATATGTTTGTGACAGCAACTGCGGCTACTAATACACTGGTCCAGAAAAT
CGAATGAAGATCATCTTTTTTATATTCTGGAAATTATATCATTATAGTAG
ATTTAGAAATGTCTCagtttttattgtttaaaataaatgtaaaaattttc
aattctttgtgAACGTTTTTTCTAAACAATAAAAATACCGTTT
Run BLAST on NCBI

protein sequence of TCONS_00035319-protein

>TCONS_00035319-protein ID=TCONS_00035319-protein|Name=TCONS_00035319-protein|organism=Clytia hemisphaerica|type=polypeptide|length=139bp
MLMKSIVMPLANYMAINSGTQIILIILSLSFLIFLQDLEDASFGIRIKSH
FYTFSITMKSIMIFAAIFALCLVVNGNPMKERFNRQPTEFMEEVYQDGAI
AKRADRTDNQLLKSICYYQCLETNKVAGTTYVCDSNCGY
Run BLAST on NCBI

transcript from alignment at sc0001297:45346..60588+

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00035319 ID=TCONS_00035319|Name=TCONS_00035319|organism=Clytia hemisphaerica|type=transcript|length=15243bp|location=Sequence derived from alignment at sc0001297:45346..60588+ (Clytia hemisphaerica)
CAAGAGCGTTGTCAACAAGATCTTGACAACACATTTTATAATGCTTTTAT
TGTTATCATATAAACATCGCCTAATCTTAAGGTGTTCAATTTTATTGTTC
TTTGACGCTGAAACATATTCTATCGAACACGATTGGCCATTATTAACCTT
CACTATTTTGTTATGCTAATGAAGTCTATTGTTATGCCACTTGCAAATTA
TATGGCTATAAATTCTGGAACTCAGATTATTTTAATCATCTTATCTTTAT
CATTCTTGATATTCTTACAAGACTTAGAAGACGCTTCATTTGGAATCAGA
ATCAAATCGGTAAGCAGTTTTTCATTCATATCTCGCGCAGTCTATTTGCC
ctaacacacccctgtctcaatcgCCCGGCGATCGAGATGATAATACTAAT
AAAAGTATCTAATTGTGAGATAATTTTGAAGACTCTATTGTAATACAGTT
TGAGCCAAAGAGTGAAAAGGAACTATGTTTTAAATTCATCACCTTCAAca
atgaatgtatttttttagcatttttacaCTTTCAGTATCACTATGAAGTC
CATTATGATTTTTGCTGCCATCTTTGCTTTATGTTTGGTTGTCAATGGAA
ACCCAATGAAAGAACGATTCAACCGTCAGCCGACGGAGTTCATGGAAGAA
GTCTATCAAGATGGAGCTATTGCAAAACGGGCTGACAGAACTGACAATCA
ACTGTTGAAAAGTATCTGGTATGTATATGTATCATTAATTTTATAAGATA
CTGTGCCTGTAATAAAAATTAAGGAAGTTAAGCATATTAAGtctagtaag
taagtctgcgatcACAGTAGGAGTCGACCTGaagcgccactctttctccc
tggattgttcaacttacccttgacccttctcttaattgctgagcatcaag
cagagaggcattaagtaccattttgggaatctttggtataacCCGGcagg
gggttgaacccacaatctTGCGAACTaaagccggatgctctaccactgca
ctacggtcgtcGCTAATATTACTGCACTAACAGTCGCCAATATTAAGTCT
AAATCGTCAGTGTCAAAACCAGTTCGAATTCCCTTCCCGATTTTCGTTAA
GTTGATACCATTGAGGAGCTTAAGGGCTCTGTTCATTGAGttcaaagccc
cgaaggggctagaggagaatctcttggatgggaaatgaagccacgtATTT
CCCATCGATTTTTCACACAATCGTCGGATTGGGAAAaagtctatcgctag
atttcaaaaaatgtagtacTCGATAACAAAAAACCGCTAGAAACTATCTN
ATCTATCActacatttcaaaaaatttagtacttgataaaaaaaactgcTA
GAAACTATCTATCATCATGATTGCGGCGCTTTCTGGACGTGAAAttagtg
gcttcacttttcctTACCTGGGAAAGGTTAATGATTCTGCTCTAGCCcct
cgggctttaaactcaatggctttgtccatagtgaatttttcatatttgcc
atgtacaaaatataaatttctgctGGACGTAGCCAACAAAaatatggcat
gttatacattttctggtAAGCCGACTCTTCTTgaatcagaaaattttaaa
atcgcaatgaaaagaatcgacgaaaaagaaaatgaagacttttcgAGTAA
GAGTTTTTCAACTTTGAGGACGTTATTCTCGGTAAAGatgaaatatttcg
aaaaacGTTTTGCATTTTATGGTGTATTTTTAGCCGAACTAAAAATAGAT
TTGCAGAAAATTGTTGTAAAAGTTTCTTTgattcaaaatcatcaaaattg
tggttttttcccatttttctcATCGAAGTTTCTCAGACAAAAACTGTCAT
AAATtgtgatacacgcttttttataagaatatactaatgaaattggccaa
aaaattaagaatgtcCTAAGAATATTACCGTCATGAAATTTGCTTTGCTA
ACCATAAAtttctattttgatgttttttgttAGCCTAAATCTCTTAATTG
CCACTAAAGTTTCAAGGATTTTAGGATTTTGGCATCTTAAAATAGTATTA
TTTCTGGAAATTGCAATAAATCATCTTTGGTAATATATTATTGAAGGTAT
GGCTTGTAAGTTGACTAAGAATACCTTAAGATGattttaagataattttt
ccgaaaaagttaagaatattaatgatgaaatggaaaaacaccattcttat
aaaaagtgtgtacatcaatttcgaaaaattttgtgaCGCCATCCAAAAAT
GGATGACGTCATCCCATAATTTCTACCTGCCGGAAAATTTGGTGAGACGT
ATGGTCTACAAAACATGATCTCAGAATCGAATGGCTTGAGATATTTAGGT
TCTGTTTTCAGAAGAAGTTAATGAGCTACTCTTCCAAGTAAATTCCgggt
ttttattttgaaaaaagattttatttttaaaatcaaagcTGATCATgagc
aaaatttccaaaaattgatgacgtcatagatgatgacgtcatcattgacA
CCTAACATCTGTCAAAAATTGAGTCTAATTGGGTAagtagttcaaaagtt
atgagcaTTTAAAATCTTTGAGTTTTAAGGGATTTTAGCTCCCTATAAGA
ATATGAACTTGAAGTTTTCCATAGGGCAAGGCTAATTTCATTAGTTGTTT
TTACGGTCCTgccttaaaatctaaaaaactaatcaaaattaaataaattt
tggtAATCTATAATTTGGTAATCATTATTTTTACTGGTTGCCGACTGTCT
ACTATTTCAAAATTATGGTAGATTTTCCAAGCTCCCGAGAATTTTAcatc
caatttttttcatttctttattatttACCAATTCACTCTTTGTGTGTCTT
CTTCTTAATAATAATTTGCATTTTTGTCAGAATTTGCTAATTTTTCTgcc
attttactttttcatttttattcgttttttttcaGTTACTACCAATGCTT
AGAAACCAATAAAGTTGCCGGAACGTAAGtcaattctttttcaaattatt
ataaCTTAAAAAGGAAGAATTTCGAAATGCAAATGCCGTTTTCATCAGTT
CACGTAAAGAAAGCATAACTACTCTAACTTCCCCGTGACCAATGATACAC
ACATTCTGCGATATATTGAGTCATTACGTTTTTCTCAGTatgtttctttt
tcaagaaataTGAGTGGTATGGTATATGATATCTATCATATGTGGCATAT
CTAAGGAATTATAGAAGGAATTTGAAGCTGATTCATAATACTTATCattt
taatcgatcttccttaataAAAAAATGCATTCGCTTTTTATACTAAANNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
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NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNGTTTTCTGACAAATGGTGAAAGAAAccttccctgaaaatttcatg
aagCTAGCACTTTCCAATCCTGAGAAATATCCGTCAAGGCGTTAGTAAAC
CCCCGGAAACGTGTTTCCGggaaaagggcaaaaaagtaaagaaaacgtAA
TATCTTATgacaaaatgtattttttaaccTAGTTTTTTCAGccttttatc
tgtttttgtaAAACAATCCATAATTTATATCACATAACCAGTGTAATCAT
CAAAAACGTCCAAAATCCTTGCATTTTGTCCTATTTCGTGTTGCGCCAAA
CTAACAAAAATCATGTAATTGGCTTGCGCAAAGTCCATTTTGACCCTTTA
TTCACCAAATCTTGGGTATATTTCATTTCAGTTCACTCAATAAAATATTA
TCATGCATTTTCAATCAAATGGAGTCAGTTTCTGACTATCAATTAGGGTT
TTTTTATGTTGTCATGTCAGTCAAGGTGCAAGGTCTGCGCGACCGGGCGA
CCCGGTTGCTCATACCAGATTTCAACCCTCGCGAAGCCATATAAGTACAC
CATTTATTGTATTGTGGACGTCTAATTGATGGTACAATGGAATTTTCTGG
TTACTCCAATTAACTAGTGGTTCATAGTATATCACAAAATAGTTTGAATG
TCAAGAAGAGCTGCAGAAATCCTTCCAGAAAATCACATAACGACAAATGG
TTTGTACCGGATAGCCAACCTCTTCaggtagggtgcgcactcgtcgggat
tttttgcgcggaacgaggaagaatttacaaaaatgaacttcaatgcatta
gtacttacctttaaatcatccaaaNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
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NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNAAATAAAATGGCTTTACACCAACAAA
ATACAGTTGCAAAGTCACAGAACTTGCTTCCATTTTGTTTACACTTTTGC
TCGCTTGTCATGGAACTAAAACCTATATTTTGAAACAACCCGTAAACCAA
AGTAGATAAGGAACTTTGACGCTCGAAAGGGCGTTAAATAAGCTTTCTTT
TGGCGTGCTACTTTGCTATGCTGGGACAGGTATTGAGCGATTAAGGCCAT
AgcgaccgattgaaatttggTTGCTAGGGGGGTTTTTGGACTACCATGGT
ACACAAAAATGCTTCTTGTGACCCTAATACTTGAGATAcgggtttgaaat
tttcaaggcACTCTCAGGAATGGTTGTAGATTCGAAAACgcccaaaaaac
aaaaatttataattttttcggTAACTTTTCAAATCTCAGGTAACTACCAC
CTTAAAGAAGTTTGGACGAGCATACTTATTTGTATACTGAAAATGAAGGG
CGAAAAAAAGGCTCTTCAAAACACTGATTTCAGCGCCCCTTTCGACCCTT
TCCCCTTTTTCCGTTCCGTTTCATGGCAGTTTTTAGCCCTATAAAATGGA
GATATGTCAGATATGtggaaaaactttttgcaatttttcctagtAAAGGG
GTGCCAAACTGCCGATTTTACTATTTTGCCTCCCCAGTTTTTGCCAAGAG
ATTTCTTCCTCACGTTCGATTGACGAGAATAAAAAAGACATTGCATAGTG
ACGAATGCACTTTCGAATGTCTTGAtcaagattcgaatgttttgttttga
aaagacaggAAAGACAAAAAAGAATACAAACATGAATTGTCGGGTTTATA
CGGAAGCCGAGAGGGGAcatccaaactttctttttttgtcgacttttttt
ctttttttgccgactttttttcttttttttgctgactttttttctttttt
tgctgactttttttctttttttgatttgaaaactttttttctttttttgc
caactttttttcttttttNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAATTAAATGaatacaaa
aaagattttggcaaaagttatgctaaaatatGCTTCTTTTTGTGCCAAAA
GTGTGATTTCGATGAAATAGAAAGCTCATCATTACCAactaaaaaaaagc
aaaaatcagtcaTAGCAATTGACGAAATTGATAATGATGATTGTGGTAAA
CATGATAATcattttgatgatgatgatgatctcTTCCAAGCTGTTGATCC
CAATTTAGTACTCCCACCACAATGTTCTTCTCACGCACCTCCACCTCCAC
CACCACGCTCTTACACACCTCCACCGACACAACCTTCAGCCACCCCTTCA
TCACCGCCTCCTTCCTCAACAAGACCGCCTGTTGATCCCCCATCTCAATT
TGCTGATCCTGAAACTCTTAAAGATAAGATGACTCAACTTAAGGTTATTT
TTAAAGAGCTACCTAAAATTGAATTGTTAGTCAGATGGAGATGTATATAC
ATTGATACAATGGAAAAATTAAAGATGCACTGGGCTGACGAAATTCGTCC
TTTCACCGTTAAATTCATTTGGGATGAAGTGTCTGAAGGAGATGGAGTTT
TACGTGAATTTTTTTCGCTTTTCTTTGAAGACGCCCAAAAACATATTTTG
GTAACCGGACAGTCTGGAAAATTCTCATTCTTACATTCCTTTGATCAAAT
CAGAAATAAGGAGTTTTATATTTATGGGAACTTAATTGCAATGGCACTGC
TTTCTGATAGTGCTGGTCCAAGATGTTTATTAAGAGAAGTGGTATGTAAA
ATCTTTGATGTAGAAGAAGAATCCAATTTGACCATCAATGATATCCCTGA
CTTAGATATCATGttgaaattaaatgaaattaattCATCAACCGCagaag
attttggaaaaaacattgaaagttttAGTGAAAGGTTTACATCAGGTGTT
GTTAAACATAAAATTGACTTTGAGGAAAGAGAAAATTTTGTCAAAGACAT
ACTGTATCATTACTGCATATCCAATTGCACTGAAGAAATTAAACAAGTGA
GCAATGGGATTGATGACATATTTGGTCTGAAATCTGTACTTTCTGACCAT
TTTGATGAcattttggaagaatttttaCTCCCGTCAAAGCAAAAATCTAA
CAAGCTTCTTGAGGTGTTTACAAACCTCAAATACACCGAAGCaacaaaaa
ttcaagaaatggATATTTTCTACAACTTTACTAGTTTTTTAGCTTCTTTG
GATACTAAAGATTATACATTTTCATTGGAATCCTTGATTCCTGGCAAAGA
AGAAAAACGAGAAGTCACAGTGAACCTCAAAGAGTTAACACGCTTCTGCA
CTGGGTCGTATTTTGTTTTAGAAAGCATGAAAAGTCAAGGTACTATTGAG
TTTCCCAAAACTGATGAAGAATCTCATGGAACAAGAGCAGAAAGTGGCAC
ATGCCTTTTCATATTAAAATTTCCTCTGACAGAAAGATATTCTTCTTCAT
CTGcagaatttatcaaaaatttctgCACTGACATTGTTGAATCCCCTGGA
TTTGGAAAAGCTTAGTTTATATATGTACATTTTGTTAGGggattttttct
ttgaagttagtttttttgtttcgaCTTTCTTGTTTTGTATAAAGACCTTG
ACAGAAACCATGATCTATTACTactatttttaaacttttttcttcctaag
catttctttagaatttttcaaagttACTCAAAAATGCAAGCCAGAAAAGT
ATCGTTAAGTAATTATTAATTTCTGAGACTTTAGTCTGAACTTTTACACT
ACTTTGGACCACAATTACAGAACTCCCTTGAGAGAATGTTCGTATTCTTT
TGTTCATTACTTAAAATATTGTTTGAGTATATTTCTATTATGtataattt
tttgtacaaacaAAGCTTATAggtatttttaagattttgctttttattta
gTAAGTTGGTCCTTTGAGTATGTTTATGATGATGatacactttttgattt
tttagttttttttaagcatattattttaccttttttatgTCTATTGATAG
CTTTTTAAAGCTTCCTTACTTGAGATTTTGTTCTCAGtttatatttttaa
gatttctattttattttcgaCAAGCTTGTTGGTGAAATTACTATGCTAAA
GTATTTCTCCAAATTATCTGCAGTGTGGAAAACAATAGGATGTAACTagt
gatagaatttgaattagatcATTATTTTGTTCAGTCAACGTCAACTCAgt
caaaatatatcaaataaaGTTGATTGCTGAATAACTcttaaacaacaaaa
acaatttttacaataaactagcaataaattttgtttgatatcttttgact
aaataaatttttgaaaacatcgaTTTTTTGAACAATGATGATactctaag
atcaaagaatcactccTCAAAAATGGTAATAGATATAGAGCAATTTTACC
ACGAGTTTAAATTTTAGCTACCTTGAGGAATTCCACGAATAAACCTTTGT
CCGCATGTTCGTTTTTTctatcgaatgttttttttccactACAGATTATC
TTTTGAatgattttaaattcttttgaaaaattcaagctTTTAGGTTTATA
TATATTTGATtaaaaacttctttcttttgatatttacTACTTTGTTCTAC
TTATATTTGATTATAGACTTCTATCTTTTGATATTTACGACTTGTCATAT
TTACTTCATTTCACATTATTTTGCCtgttatttcattatttttgttttca
tggtaaaaataaaattgccctcgttacattccactgctcccaaaatcatt
aaaaaacttggctcggggtgaatcataagcataattcttaagcatataat
aagcatacacgagcctgacttgcatataaaaaaacaacatgtacTCGACA
AATTTTGACTCGACTGCCTTTTTGAGTGATTAGAATTTGGAAAAATGGGT
TAATTAGTGAAAAATTCATATCTAAACTTAATATTTAAGTCAATACTAAT
TTTTGGTCCTACCTCTGGGTACCCGAccgtggaggtcctttaaattaacc
catgttcgttcgtttgttcgtctgttaccagcttttctcgggattggctc
attacttttttctgttttttgcacaatgatgcaaaatgatgatTCCCAAA
TCAGGAGCACGGagcacgatttcaaaaaaaaatatgccggaaaactgttt
ttttttaaatcgccggaacaatctattttcgccggaaagacagtatttct
taaatttctcgATGAGCTGtatgtactttatattttttatgaaattttgc
acactaatgtaaaatgacaatacctaaaatgtgacggagcccgattatat
gccggaaaaatcgaattttcatcctttacttttttctgattttttgcaga
aagatgcgtattcgcaatgctcaaaacatggccaagttcgatttttgaga
aaaacatttttccggttgaaaatgccggaaatcgccgttttttgcagatt
ttcattgcggattttttccttaatatttccatgtttttcacacaaaaacg
ctataaacgctatattttctgactgatttttttcactatcaggtaggtcc
attcagcatctagcttgttttctatatctatatattaatagccgtagtct
gtatgtgtgtttgttggtttgttttttgtgtgtcactttcgttttcgcaa
gcaatgttttgttcttttaaaagatNaaaagatgacttttgcttcttgct
ccacaaatgtgttaaatcagattcgcgccgttttataaagactttgtttt
gattgatagatttgactgtgtctttttttttctttcttttcttttgtttt
atgttttcgaatgtaattaacgaccttatttgatttgagacattcgaatt
cttttcaaaacaaaagaaaaTCTTTTAAACAGAATCTGTTAAAcaaaaga
acaaatataaaataaagcataagaatcacaagacaagtttgttagaacaa
cagcaacattaaaaatacattcaaaaggcggtaaaaactagaattctttc
ttcgtaaaaagggacctttaaacatctatgtcgataattattttgctgta
aatctaagtcattgttgaatttgaaaaattattcaagttatgacgaagtt
attttataaaaagcaacataaaattgcgctatcacgcttttttgtctgcg
tgtgcTAGCTGCCTTctggggggactatggttgcgagctgattttcggcc
ctgcccctcaGACCCTTAGCAGaaaaaagaggagaagaaacaataaagaa
acaagggaaattgtgtgaattttaattcactttttggaactaatttgacc
aaatttctatctttctgggggcaaaaagttgaaatttNAAAGTTGCCGTC
CTAGTTGCTTAAGCTAAAGTCCCTAGATACTGTCATTATGCCGACAGACA
AGAATGTACCCGCGCTGATATTCGAACAGTGGACGACTCTTCTTACTGTA
TGTGGGACTCAAAATTTATATGGAAAAGGATGCTTAAGTAATGGGACTGA
ATTgtcaaaattttctattttttcttcaaaagagACTCGAGCTTAGTTAG
TTGTTTGAGACCCTGAATGATgtgacttttaaatttaaaatctaaaattg
atGAGACTCAAGGTGAAAAAAGACACGGCTAGCAGCACACTCCCATATct
tttttgcctaagtacctattgatcaaaacatttttctataattgttctga
aaaccatttttgcttgttGCCAATTCTTTGGAGGATACGGCAAAGATTCT
GAATCGACCACGTATCTAAAATATTCACTCAAATTTGCACCCTCTTCCTG
AATTTCCAAAGCTCCTGCCTCATCTAAAATGTTCCTTTCATTAAGTAATT
GTTCGATATCGTCGTTTTGTATTTCGATCTGTTCATTTTCGTATCCTTCA
GGTGgcgaaaaataatttatgtcCGGAATTCCCGCGATACTATCGTTCCT
TGACTTACGGATGTAGTGAGTGTTCCATTCATATCGCACTTCATCAAGAC
ggttttgtaaaaaatctgaaaatacaaACCACACGCATTCCATATGGACA
TGGTGACCAAGGACAAGGATATTTTCTTCAATAAggtctttgaaaaattg
aatcaccCAAGCAGTATAACTTCTCTTCAAGCTTGACCACCAGTTTTCGA
TTCTTTGATTTGCCACCGACGTTCCATAATTATGAGCATTCGCATCCTTA
ACAAGATAGCAATGCATATCTGCCATAATGCCATTTTCTGTCCCTAAGTC
GGTGCGTAGCTTCTTAGGACAAAATCCAAGTTCTTGCACTGATTTGACAT
AAAATGAAGCTGGTATTATGGGATTATTATTCGTTCTTGTCACCTTGAGC
CATATAATTCTACGGGAGAATCCATCGATGCAGCCATGTACTGGCAGTCC
ATAAGGCTTTAATTTGTCGTAGCCATCAATGTGCCAACATTGATTTGGAC
CAGAGGACACGTAAACCCGCCTATTAAGACGATTCCTTCTTCGCTCATCG
TTTCCTTCAGGGTCGATTTCTTTTAGCAGTCGCATAACATCGTCTCTTTT
AATGTTGATTTCGTATGCCATTTTCAAATGATGCCATAAACTACGATAGC
CCCTGAGGGATCCAGGTCCTTGAATCTCTCGTTCAATTAATAGTCTTACT
ACTTCATCCGTCACATTGTTGCGTCGTTTTTGCAATCCGTACGATTTTAA
CTTCCTTTTAAGAGTTCTAGTGCTCATCGTGATCTGATGGTGTATCTCCA
TAAGCTTAACGATATCGTCATACTTATAATATTTGTAAAAATAATGTTCA
ATGATTTCTTTCTCATCAGTCATTTCGAAGACGTTGTCTTTTGTCCTAGA
AGGTCTTCTAGCACCACATATTGAGCAAAAAAAACCATCATTGTCAATTA
AGTGACCACAATGAGTACAGAACACCATATTTGAGTAGCGAATGCACGTG
TAAAAGCGAGATAAATATTATTGATATAgtcgacaaaaaagaaaaaaagt
caccaaaaaaagaaaaaaagtcgaccaaaaaagaaaaaaagtcagcaaaa
aaagaaaaaaagtcgaccaaaaaagaaaaaaagtcaccaaaaaaagaaaa
aaagtcgaccaaaaaagaaaaaaagtcagcaaaaaaagaaaaaaagtcga
ccaaaaaagaaaaaaagtcaccaaaaaaagaaaaaaagtcgaccaaaaaa
agaaaaaaagtcagcaaaaaaagaaaaaaagtcagcaaaaaaagaaaaaa
agtcgaccaaaaaagaaaaaaagtcgacaaaaaagaaaaaaagtcggcaa
aaaagaaaaaaaagtttcaaaatcaaaaaaagaaaaaaagtcagcaaaaa
aagaaaaaaagtcagcaaaaaaagaaaaaaagtcgacaaaaaagaaaaaa
agtcggcaaaaaaagaaaaaaagtcgaccaaaaaagaaaaaaagtcagca
aaaaaagaaaaaaagtcgacaaaaaagaaaaaaagtcggcaaaaaaagaa
aaaaagtcgacaaaaaagaaagtttggatgtcccttctcggcttccgtaG
GTTTAAGTTAACAAGCACATGCAAAATTAGCGCGGGTAAGAGctagaact
ttttttcaaaggcacgaacttttttttcaaaggcatgaactttttttcaa
aaggcatgaacttttttttcaaaggcacaaacttttttttcaaaggcacg
aactctttttcaaaaggcatgaactttttttcaaaaggcacgaacttttt
tttcaaaggcacgaactttttttcgaaaggcaagaactttttttcaaaag
gcacgaagggcacgaaggcacgcaaggcacgaaaaaaattaCACTCCCCC
AGAATGATGGAAATGGAGAGACTTTTGGTTgacatttaaaattatttttg
tcaaaattgatAAAGGGTCTGAAAttatttcgaaaattaataagtacacg
cttttttttttataagaatacactttataagaatgtccatgatgaaaatg
gcctaaaaattaagaatatgctaagaatatcaccatcatggaaNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGTAGGTGGAACGCTTATTCG
GGAGCCTAGAGTACATCTTTATTAAGGCTGCTTGACCATAAGACTCTTAT
CTATTCTTTGAACTACGAAACAAGCTTTTAACTCCTTCTAGCTGTAGAAA
TATAACTGATgtttaaagttttgaaattttattgcttGTCTTTTACAGGA
CATATGTTTGTGACAGCAACTGCGGCTACTAATACACTGGTCCAGAAAAT
CGAATGAAGATCATCTTTTTTATATTCTGGAAATTATATCATTATAGTAG
ATTTAGAAATGTCTCagtttttattgtttaaaataaatgtaaaaattttc
aattctttgtgAACGTTTTTTCTAAACAATAAAAATACCGTTT

Coding sequence (CDS) from alignment at sc0001297:45346..60588+

>TCONS_00035319 ID=TCONS_00035319|Name=TCONS_00035319|organism=Clytia hemisphaerica|type=CDS|length=1680bp|location=Sequence derived from alignment at sc0001297:45346..60588+ (Clytia hemisphaerica)
ATGCTAATGAAGTCTATTGTTATGCCACTTGCAAATTATATGGCTATAAA
TTCTGGAACTCAGATTATTTTAATCATCTTATCTTTATCATTCTTGATAT
TCTTACAAGACTTAGAAGACGCTTCATTTGGAATCAGAATCAAATCGcat
ttttacaCTTTCAGTATCACTATGAAGTCCATTATGATTTTTGCTGCCAT
CTTTGCTTTATGTTTGGTTGTCAATGGAAACCCAATGAAAGAACGATTCA
ACCGTCAGCCGACGGAGTTCATGGAAGAAGTCTATCAAGATGGAGCTATT
GCAAAACGGGCTGACAGAACTGACAATCAACTGTTGAAAAGTATCTGTTA
CTACCAATGCTTAGAAACCAATAAAGTTGCCGGAACGACATATGTTTGTG
ACAGCAACTGCGGCTACTAAATGCTAATGAAGTCTATTGTTATGCCACTT
GCAAATTATATGGCTATAAATTCTGGAACTCAGATTATTTTAATCATCTT
ATCTTTATCATTCTTGATATTCTTACAAGACTTAGAAGACGCTTCATTTG
GAATCAGAATCAAATCGcatttttacaCTTTCAGTATCACTATGAAGTCC
ATTATGATTTTTGCTGCCATCTTTGCTTTATGTTTGGTTGTCAATGGAAA
CCCAATGAAAGAACGATTCAACCGTCAGCCGACGGAGTTCATGGAAGAAG
TCTATCAAGATGGAGCTATTGCAAAACGGGCTGACAGAACTGACAATCAA
CTGTTGAAAAGTATCTGTTACTACCAATGCTTAGAAACCAATAAAGTTGC
CGGAACGACATATGTTTGTGACAGCAACTGCGGCTACTAAATGCTAATGA
AGTCTATTGTTATGCCACTTGCAAATTATATGGCTATAAATTCTGGAACT
CAGATTATTTTAATCATCTTATCTTTATCATTCTTGATATTCTTACAAGA
CTTAGAAGACGCTTCATTTGGAATCAGAATCAAATCGcatttttacaCTT
TCAGTATCACTATGAAGTCCATTATGATTTTTGCTGCCATCTTTGCTTTA
TGTTTGGTTGTCAATGGAAACCCAATGAAAGAACGATTCAACCGTCAGCC
GACGGAGTTCATGGAAGAAGTCTATCAAGATGGAGCTATTGCAAAACGGG
CTGACAGAACTGACAATCAACTGTTGAAAAGTATCTGTTACTACCAATGC
TTAGAAACCAATAAAGTTGCCGGAACGACATATGTTTGTGACAGCAACTG
CGGCTACTAAATGCTAATGAAGTCTATTGTTATGCCACTTGCAAATTATA
TGGCTATAAATTCTGGAACTCAGATTATTTTAATCATCTTATCTTTATCA
TTCTTGATATTCTTACAAGACTTAGAAGACGCTTCATTTGGAATCAGAAT
CAAATCGcatttttacaCTTTCAGTATCACTATGAAGTCCATTATGATTT
TTGCTGCCATCTTTGCTTTATGTTTGGTTGTCAATGGAAACCCAATGAAA
GAACGATTCAACCGTCAGCCGACGGAGTTCATGGAAGAAGTCTATCAAGA
TGGAGCTATTGCAAAACGGGCTGACAGAACTGACAATCAACTGTTGAAAA
GTATCTGTTACTACCAATGCTTAGAAACCAATAAAGTTGCCGGAACGACA
TATGTTTGTGACAGCAACTGCGGCTACTAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_020626XLOC_020626Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00035319-exon-sc0001297-1491911889:45346..45654TCONS_00035319-exon-sc0001297-1491911889:45346..45654Clytia hemisphaericaexon
TCONS_00035319-exon-sc0001297-1510915933:45346..45654TCONS_00035319-exon-sc0001297-1510915933:45346..45654Clytia hemisphaericaexon
TCONS_00035319-exon-sc0001297-1575043694:45346..45654TCONS_00035319-exon-sc0001297-1575043694:45346..45654Clytia hemisphaericaexon
TCONS_00035319-exon-sc0001297-1491911889:45864..46063TCONS_00035319-exon-sc0001297-1491911889:45864..46063Clytia hemisphaericaexon
TCONS_00035319-exon-sc0001297-1510915933:45864..46063TCONS_00035319-exon-sc0001297-1510915933:45864..46063Clytia hemisphaericaexon
TCONS_00035319-exon-sc0001297-1575043694:45864..46063TCONS_00035319-exon-sc0001297-1575043694:45864..46063Clytia hemisphaericaexon
TCONS_00035319-exon-sc0001297-1491911889:48281..48319TCONS_00035319-exon-sc0001297-1491911889:48281..48319Clytia hemisphaericaexon
TCONS_00035319-exon-sc0001297-1510915933:48281..48319TCONS_00035319-exon-sc0001297-1510915933:48281..48319Clytia hemisphaericaexon
TCONS_00035319-exon-sc0001297-1575043694:48281..48319TCONS_00035319-exon-sc0001297-1575043694:48281..48319Clytia hemisphaericaexon
TCONS_00035319-exon-sc0001297-1491911889:60394..60588TCONS_00035319-exon-sc0001297-1491911889:60394..60588Clytia hemisphaericaexon
TCONS_00035319-exon-sc0001297-1510915933:60394..60588TCONS_00035319-exon-sc0001297-1510915933:60394..60588Clytia hemisphaericaexon
TCONS_00035319-exon-sc0001297-1575043694:60394..60588TCONS_00035319-exon-sc0001297-1575043694:60394..60588Clytia hemisphaericaexon
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00035319-proteinTCONS_00035319-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0001297supercontigsc0001297:45346..60588 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.332189	0	0.752242	0.477925	0	0.84959	2.68307	6.33981	801.472	226.487	819.137	937.107	52.4365	45.7007	426.707	408.117	27.3283	19.8072	9.1106	3.84299	0	1.04185	0	0	0	0	0	0	0	0
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00035319 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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