|
|
Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00035315 ID=TCONS_00035315|Name=TCONS_00035315|organism=Clytia hemisphaerica|type=transcript|length=719bp
TTAGATGCGTAGATGCTTGAAGAGTTGCTCAAAGTCTTTATTGTCACGTT
CGTCATACTCGACATTGGACGCAGATTTTTTCTTTCGTCCTTTTGCGACG
TTTGATTTAGCATCGTTAAGTGTTTTAGTGACATAGTCGGTTGGTGTGAA
AAGCTTGTTGACTATGGTTTCTCCTGAGCGAACATCTGATGAGATTGTCA
TTTTATTGGTGAGCTGGTCTGCTAAATCTTTGAAGACTTTGTCATCTGTA
GATTTGTAGACTGTTGATTCACCCATTTCGACACAAGGAAATGAACGTTG
TTGAATGAGATCATTCACGTCTCGGCGTTTTGCTTTGATAACAACACGAG
CCTCAGTAAAaggttttgatttgaaaacggCCTTCTTGTATGAAGCTTTC
AGAACACGGTGAtacaatttcaaattgatttgagAACGCCCAGTGTTCAA
CTTCTTTATGTTTGAATTCTCCAATGCAAATGCCATTGCACGAGGATTTT
TGGATTTTCCGATCTGACGAAATTCATCTCGggattcaatttttgaatgc
aaATCGACAACAAATTTGCGTTTCGCggtgaaaacttttgcacgAGTGAT
ATCGACCTTTGTCTCAGAAGCAATATTGAACAAAGATTTACTCGAAGCAT
TTGAATTTTCACCGAAGACTTTCATTTTActcaaaatacacatttttgcA
AGACTTTCTGCGACTTGAT Run BLAST on NCBI protein sequence of TCONS_00035315-protein >TCONS_00035315-protein ID=TCONS_00035315-protein|Name=TCONS_00035315-protein|organism=Clytia hemisphaerica|type=polypeptide|length=238bp
QVAESLAKMCILSKMKVFGENSNASSKSLFNIASETKVDITRAKVFTAKR
KFVVDLHSKIESRDEFRQIGKSKNPRAMAFALENSNIKKLNTGRSQINLK
LYHRVLKASYKKAVFKSKPFTEARVVIKAKRRDVNDLIQQRSFPCVEMGE
STVYKSTDDKVFKDLADQLTNKMTISSDVRSGETIVNKLFTPTDYVTKTL
NDAKSNVAKGRKKKSASNVEYDERDNKDFEQLFKHLRI Run BLAST on NCBI transcript from alignment at sc0001294:56741..57459 Legend: exonfive_prime_UTRCDS Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00035315 ID=TCONS_00035315|Name=TCONS_00035315|organism=Clytia hemisphaerica|type=transcript|length=719bp|location=Sequence derived from alignment at sc0001294:56741..57459 (Clytia hemisphaerica)
ATCAAGTCGCAGAAAGTCTTgcaaaaatgtgtattttgagTAAAATGAAA
GTCTTCGGTGAAAATTCAAATGCTTCGAGTAAATCTTTGTTCAATATTGC
TTCTGAGACAAAGGTCGATATCACTcgtgcaaaagttttcaccGCGAAAC
GCAAATTTGTTGTCGATttgcattcaaaaattgaatccCGAGATGAATTT
CGTCAGATCGGAAAATCCAAAAATCCTCGTGCAATGGCATTTGCATTGGA
GAATTCAAACATAAAGAAGTTGAACACTGGGCGTTctcaaatcaatttga
aattgtaTCACCGTGTTCTGAAAGCTTCATACAAGAAGGccgttttcaaa
tcaaaacctTTTACTGAGGCTCGTGTTGTTATCAAAGCAAAACGCCGAGA
CGTGAATGATCTCATTCAACAACGTTCATTTCCTTGTGTCGAAATGGGTG
AATCAACAGTCTACAAATCTACAGATGACAAAGTCTTCAAAGATTTAGCA
GACCAGCTCACCAATAAAATGACAATCTCATCAGATGTTCGCTCAGGAGA
AACCATAGTCAACAAGCTTTTCACACCAACCGACTATGTCACTAAAACAC
TTAACGATGCTAAATCAAACGTCGCAAAAGGACGAAAGAAAAAATCTGCG
TCCAATGTCGAGTATGACGAACGTGACAATAAAGACTTTGAGCAACTCTT
CAAGCATCTACGCATCTAA Coding sequence (CDS) from alignment at sc0001294:56741..57459 >TCONS_00035315 ID=TCONS_00035315|Name=TCONS_00035315|organism=Clytia hemisphaerica|type=CDS|length=717bp|location=Sequence derived from alignment at sc0001294:56741..57459 (Clytia hemisphaerica)
CAAGTCGCAGAAAGTCTTgcaaaaatgtgtattttgagTAAAATGAAAGT
CTTCGGTGAAAATTCAAATGCTTCGAGTAAATCTTTGTTCAATATTGCTT
CTGAGACAAAGGTCGATATCACTcgtgcaaaagttttcaccGCGAAACGC
AAATTTGTTGTCGATttgcattcaaaaattgaatccCGAGATGAATTTCG
TCAGATCGGAAAATCCAAAAATCCTCGTGCAATGGCATTTGCATTGGAGA
ATTCAAACATAAAGAAGTTGAACACTGGGCGTTctcaaatcaatttgaaa
ttgtaTCACCGTGTTCTGAAAGCTTCATACAAGAAGGccgttttcaaatc
aaaacctTTTACTGAGGCTCGTGTTGTTATCAAAGCAAAACGCCGAGACG
TGAATGATCTCATTCAACAACGTTCATTTCCTTGTGTCGAAATGGGTGAA
TCAACAGTCTACAAATCTACAGATGACAAAGTCTTCAAAGATTTAGCAGA
CCAGCTCACCAATAAAATGACAATCTCATCAGATGTTCGCTCAGGAGAAA
CCATAGTCAACAAGCTTTTCACACCAACCGACTATGTCACTAAAACACTT
AACGATGCTAAATCAAACGTCGCAAAAGGACGAAAGAAAAAATCTGCGTC
CAATGTCGAGTATGACGAACGTGACAATAAAGACTTTGAGCAACTCTTCA
AGCATCTACGCATCTAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00035315-exon-sc0001294-1491911889:56741..57459 | TCONS_00035315-exon-sc0001294-1491911889:56741..57459 | Clytia hemisphaerica | exon |
| TCONS_00035315-exon-sc0001294-1510915933:56741..57459 | TCONS_00035315-exon-sc0001294-1510915933:56741..57459 | Clytia hemisphaerica | exon |
| TCONS_00035315-exon-sc0001294-1575043694:56741..57459 | TCONS_00035315-exon-sc0001294-1575043694:56741..57459 | Clytia hemisphaerica | exon |
The following polypeptide feature(s) derives from this transcript:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0001294 | supercontig | sc0001294:56741..57459 . |
Blast
The following BLAST results are available for this feature:
|
