TCONS_00035302 (transcript) - C. hemisphaerica

Overview
NameTCONS_00035302
Unique NameTCONS_00035302
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length423

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00035302 ID=TCONS_00035302|Name=TCONS_00035302|organism=Clytia hemisphaerica|type=transcript|length=423bp
taggttTTCAAAATCAAACATGGAATCTCAATATAATGACCCAACACTGA
AGTAAAAATTTGCATTGTAATCACAACAGGAACCTCGTATTTATGTTATC
TTATGGAATCCAAAACTATTGATGATCGCTAAATGAGACGAAAATCGCTT
TATCACGAGAATTTTAAACAAAGGAAACTCTTAAAGAGCATCATTTTGGA
ACAAGGCATTAAGGAACATTTAAATTATTTCCAGCTTTGCACATGTTACC
GAGATAACACCTTAACCGAAAGTCCTTGATATCAGACCTAAATGCAAATG
TCAACAATTAATTCATGAGAGGACTTCATCAGATCAACAATGTATACAGC
TTACCATTGATGCTCGTCTGTTTCGCCGTTTTGTCGACGTATAATTAGAA
TTGGTTCGAACCATCATGCAAAA
Run BLAST on NCBI

transcript from alignment at sc0001288:33778..34500+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00035302 ID=TCONS_00035302|Name=TCONS_00035302|organism=Clytia hemisphaerica|type=transcript|length=723bp|location=Sequence derived from alignment at sc0001288:33778..34500+ (Clytia hemisphaerica)
taggttTTCAAAATCAAACATGGAATCTCAATATAATGACCCAACACTGA AGTAAAAATTTGCATTGTAATCACAACAGGAACCTCGTATTTATGTTATC TTATGGAATCCAAAACTATTGATGATCGCTAAATGAGACGAAAATCGCTT TATCACGAGAATTTTAAACAAAGGAAACTCTTAAAGAGCATCATTTTGGA ACAAGGCATTAAGGAACATTTAAATTATTTCCAGCTTTGCACATGTTACC GAGATAACACCTTAACCGAAAGTCCTTGATATCAGACCTAAATGCAAATG TCAACAATTAATTCATGAGAGGACTTCATCAGATCAACAATGTATACAGG TAAGAATTGACAAACCGATGCATACATTTGTGGTGGGTGTCACTGGGCGT AATTGAAAACgcctttaaatttgaaaaaaattgatgttcgtgacgaaatt tatgaaaaggtttacTTCAGTCATGGATTTAGCCTCTAAAATTTGATAAC AAGTTAAGCTCCTCTTTTAACCTGATAGTCTGGCCGAAATACAATAAAAC AGGGTTGAACGTAGAAAAAAATTccgcgtaaactttcttggtaccgttgg aagcggaattttatgtagattatcaCGAtgaattttcttctctttttagC TTACCATTGATGCTCGTCTGTTTCGCCGTTTTGTCGACGTATAATTAGAA TTGGTTCGAACCATCATGCAAAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_020610XLOC_020610Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00035302-exon-sc0001288-1491911889:33778..34126TCONS_00035302-exon-sc0001288-1491911889:33778..34126Clytia hemisphaericaexon
TCONS_00035302-exon-sc0001288-1510915933:33778..34126TCONS_00035302-exon-sc0001288-1510915933:33778..34126Clytia hemisphaericaexon
TCONS_00035302-exon-sc0001288-1575043694:33778..34126TCONS_00035302-exon-sc0001288-1575043694:33778..34126Clytia hemisphaericaexon
TCONS_00035302-exon-sc0001288-1491911889:34427..34500TCONS_00035302-exon-sc0001288-1491911889:34427..34500Clytia hemisphaericaexon
TCONS_00035302-exon-sc0001288-1510915933:34427..34500TCONS_00035302-exon-sc0001288-1510915933:34427..34500Clytia hemisphaericaexon
TCONS_00035302-exon-sc0001288-1575043694:34427..34500TCONS_00035302-exon-sc0001288-1575043694:34427..34500Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0001288supercontigsc0001288:33778..34500 +
Expression
No biomaterial libraries express this feature.
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00035302 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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