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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00035286 ID=TCONS_00035286|Name=TCONS_00035286|organism=Clytia hemisphaerica|type=transcript|length=934bp
GGACACGACTGGAAATCTCCAAGGATAATACATTCGGAAGTTGCAGAGAA
TTGATTCAAAATACCCGTTATTGAAGAAAGTTGGTTTTTGTAAGTCTCTT
TACAGTCAGATTTTGAGTTAACAGATTGGAGATATACTCCTGTGATGATT
AATGATCGATTGTTGAGTGTGGTTTTTATGGTAGTCATGAAGTCCTCCTG
AAAAANATTGGAGATATACTCCAGTGATGATTAATGATCGATTGTTGAGT
GTGGTTTTTATGGTAGTCATGAAGTCCTCCTGAAAAATGGTAGCTGTATT
AGAGAAAGTTTTTTTGcgtgaaaataaaattgttccACCAAATGGTCTGC
CAAAGTTTTGTTTGTTGGCAGGTTGAAAGGTAAtatgaaagtctttttta
tagTTATGAATGAGATGTGCCTCGCTCTGAGTGAGCCATGTCTCTGAAAG
ATAGATACAATCATGTAGTCTAACGATATTGTTTTATATACAAAAAGTTC
GATTTGAAACCATGACAGTTCAAAGCGATAAATTTAACGTTTGTGCTATT
ACTCCCAGTCATTATTTCCATAGTAAGTTGTAGGTTGTAGTTGCTTGTCT
ATAGTCTATTTCAATATCACGGTAGTTGGTTTGGTTTTGATTACGAGTTG
ATTGACGTTGATAGTAGGATGACTTGTTATGCTGATAAGATGATCGGTGT
TGTTGTTCATGGCTGGTTTTGTGGCGATTGTTGTCAGATTGATTCGAATA
TGGCATTCTCCTCCGATGAGATAAAGGCTTCTTACGAAATGGTTTAATTG
CAAGTCCAACAGACCAACGATTTGATTCGAAAGCTTCTGCCTGGTTAGCT
GGTGGTATGTCGATTTTGAAGGATTGGTTGTAATTATTTGCTCTGTAAGG
CTCAATGGTTATGACTTCTATTCCAACATCATTT Run BLAST on NCBI protein sequence of TCONS_00035286-protein >TCONS_00035286-protein ID=TCONS_00035286-protein|Name=TCONS_00035286-protein|organism=Clytia hemisphaerica|type=polypeptide|length=123bp
NDVGIEVITIEPYRANNYNQSFKIDIPPANQAEAFESNRWSVGLAIKPFR
KKPLSHRRRMPYSNQSDNNRHKTSHEQQHRSSYQHNKSSYYQRQSTRNQN
QTNYRDIEIDYRQATTTYNLLWK Run BLAST on NCBI transcript from alignment at sc0001286:18963..19896 Legend: exonfive_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00035286 ID=TCONS_00035286|Name=TCONS_00035286|organism=Clytia hemisphaerica|type=transcript|length=934bp|location=Sequence derived from alignment at sc0001286:18963..19896 (Clytia hemisphaerica)
AAATGATGTTGGAATAGAAGTCATAACCATTGAGCCTTACAGAGCAAATA
ATTACAACCAATCCTTCAAAATCGACATACCACCAGCTAACCAGGCAGAA
GCTTTCGAATCAAATCGTTGGTCTGTTGGACTTGCAATTAAACCATTTCG
TAAGAAGCCTTTATCTCATCGGAGGAGAATGCCATATTCGAATCAATCTG
ACAACAATCGCCACAAAACCAGCCATGAACAACAACACCGATCATCTTAT
CAGCATAACAAGTCATCCTACTATCAACGTCAATCAACTCGTAATCAAAA
CCAAACCAACTACCGTGATATTGAAATAGACTATAGACAAGCAACTACAA
CCTACAACTTACTATGGAAATAATGACTGGGAGTAATAGCACAAACGTTA
AATTTATCGCTTTGAACTGTCATGGTTTCAAATCGAACTTTTTGTATATA
AAACAATATCGTTAGACTACATGATTGTATCTATCTTTCAGAGACATGGC
TCACTCAGAGCGAGGCACATCTCATTCATAActataaaaaagactttcat
aTTACCTTTCAACCTGCCAACAAACAAAACTTTGGCAGACCATTTGGTgg
aacaattttattttcacgCAAAAAAACTTTCTCTAATACAGCTACCATTT
TTCAGGAGGACTTCATGACTACCATAAAAACCACACTCAACAATCGATCA
TTAATCATCACTGGAGTATATCTCCAATNTTTTTCAGGAGGACTTCATGA
CTACCATAAAAACCACACTCAACAATCGATCATTAATCATCACAGGAGTA
TATCTCCAATCTGTTAACTCAAAATCTGACTGTAAAGAGACTTACAAAAA
CCAACTTTCTTCAATAACGGGTATTTTGAATCAATTCTCTGCAACTTCCG
AATGTATTATCCTTGGAGATTTCCAGTCGTGTCC Coding sequence (CDS) from alignment at sc0001286:18963..19896 >TCONS_00035286 ID=TCONS_00035286|Name=TCONS_00035286|organism=Clytia hemisphaerica|type=CDS|length=372bp|location=Sequence derived from alignment at sc0001286:18963..19896 (Clytia hemisphaerica)
AATGATGTTGGAATAGAAGTCATAACCATTGAGCCTTACAGAGCAAATAA
TTACAACCAATCCTTCAAAATCGACATACCACCAGCTAACCAGGCAGAAG
CTTTCGAATCAAATCGTTGGTCTGTTGGACTTGCAATTAAACCATTTCGT
AAGAAGCCTTTATCTCATCGGAGGAGAATGCCATATTCGAATCAATCTGA
CAACAATCGCCACAAAACCAGCCATGAACAACAACACCGATCATCTTATC
AGCATAACAAGTCATCCTACTATCAACGTCAATCAACTCGTAATCAAAAC
CAAACCAACTACCGTGATATTGAAATAGACTATAGACAAGCAACTACAAC
CTACAACTTACTATGGAAATAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this transcript:
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00035286-exon-sc0001286-1491911889:18963..19896 | TCONS_00035286-exon-sc0001286-1491911889:18963..19896 | Clytia hemisphaerica | exon |
| TCONS_00035286-exon-sc0001286-1510915933:18963..19896 | TCONS_00035286-exon-sc0001286-1510915933:18963..19896 | Clytia hemisphaerica | exon |
| TCONS_00035286-exon-sc0001286-1575043694:18963..19896 | TCONS_00035286-exon-sc0001286-1575043694:18963..19896 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0001286 | supercontig | sc0001286:18963..19896 . |
Blast
The following BLAST results are available for this feature:
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