TCONS_00035280 (transcript) - C. hemisphaerica

Overview
NameTCONS_00035280
Unique NameTCONS_00035280
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length192

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00035280 ID=TCONS_00035280|Name=TCONS_00035280|organism=Clytia hemisphaerica|type=transcript|length=192bp
AAATTGTTATCTTTCTCGTCTAGATTTATCTCGTaataactaaaataaaa
atgtcgTCTTCCGAATCAACCGAATCGAGCGACCAAGCGACGATCGAAGC
TCAAGAAGCTgaaattttaagcctaaaagctCAATTAGCCAATGAGTATT
TTTATTTACGGCTGTGCAAGtcaaaagaagatttttgcaaga
Run BLAST on NCBI

transcript from alignment at sc0001282:14598..14789

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00035280 ID=TCONS_00035280|Name=TCONS_00035280|organism=Clytia hemisphaerica|type=transcript|length=192bp|location=Sequence derived from alignment at sc0001282:14598..14789 (Clytia hemisphaerica)
tcttgcaaaaatcttcttttgaCTTGCACAGCCGTAAATAAAAATACTCA
TTGGCTAATTGagcttttaggcttaaaatttcAGCTTCTTGAGCTTCGAT
CGTCGCTTGGTCGCTCGATTCGGTTGATTCGGAAGAcgacatttttattt
tagttattACGAGATAAATCTAGACGAGAAAGATAACAATTT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_020591XLOC_020591Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00035280-exon-sc0001282-1491911889:14598..14789TCONS_00035280-exon-sc0001282-1491911889:14598..14789Clytia hemisphaericaexon
TCONS_00035280-exon-sc0001282-1510915933:14598..14789TCONS_00035280-exon-sc0001282-1510915933:14598..14789Clytia hemisphaericaexon
TCONS_00035280-exon-sc0001282-1575043694:14598..14789TCONS_00035280-exon-sc0001282-1575043694:14598..14789Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0001282supercontigsc0001282:14598..14789 .
Expression
No biomaterial libraries express this feature.
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00035280 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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