TCONS_00035267 (transcript) - C. hemisphaerica

Overview
NameTCONS_00035267
Unique NameTCONS_00035267
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length594

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00035267 ID=TCONS_00035267|Name=TCONS_00035267|organism=Clytia hemisphaerica|type=transcript|length=594bp
TGTTTGGCTTTTGCCAGTGGAGCCTGGGTACCAGAAATGGAAAACGAAGG
TCTTTACGAAGGAGACATGATTTTAGATCCTGACCAGCAGAAGGAGGTCG
AAGATGGAACTTTCACTTTCTCATCAACTGGCAACAGAAACAAATTGTGG
CCAAATGCTGTCGTTCCTTACTCATTGACTTCTGATTTAGCCCGTGATGG
AAAATTCATGCGTGAATTTCAACATTCGATCGATCAATATCACAAATATA
CTTGTATTCGTTTCAAGAGGCGATCAAATGAACGAGCTTACATCGGCTTT
TACATGGGTGGAGGTTGTTCGTCACCAGTCGGTTATACCGGCGGCAGAAA
TAGGGTTTCGTTATCCAAAGGATGTCATTGGAGATCAACCATCATGCATG
AAATCGGTCACAGTTTAGGTTTCCACCACGAGCAGTCACGTCCTGACAGA
GACAACCACGTCACCATTTTATTCCACAACGTCGCCAGGGGAACGGAACA
TAATTTCAAGAAACAATCATACTCTACAACTGACTCAAAGGGCACTCCAT
ACGATTACAGATCAATGATGCATTACTCATGGGACGCATTCGGT
Run BLAST on NCBI

transcript from alignment at sc0001279:17611..43336+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00035267 ID=TCONS_00035267|Name=TCONS_00035267|organism=Clytia hemisphaerica|type=transcript|length=25726bp|location=Sequence derived from alignment at sc0001279:17611..43336+ (Clytia hemisphaerica)
TGTTTGGCTTTTGCCAGTGGAGCCTGGGTACCAGAAATGGAAAGTAAGTT
AAAGCAAGATTTAAGAAAACCTCTAACATTTTTCAGATCATTTGGCGCAT
TGGGCTTTTTCAGAAAAAAAAATTGAATATGGGGGGTGGATGATATAACA
TTTTTTTTAAATTTACCCCCGGACATTGTGAATTTTGACCCCCGGACAAG
CATCAGTTGACCCCCTGGACAAGCATCAGTTGACCCCCTGGACATTGAAA
ATAACCCCCACACAGAGCAAGTTTATCCCCCGGACAGGGCAAATTTTGTA
GATTTTTCACTAATTTTTGGATTTGAGCATCCTGTCTCCGTGTAACTGAT
CAATTTCAATTGACTTGTTAAATTATCAACTGTAACAACGTTCTTCCTAT
TCTTTCATATCATTTTAGACGAAGGTCTTTACGAAGGAGACATGATTTTA
GATCCTGACCAGCAGAAGGAGGTCGAAGATGGAACTTTCACTTTCTCATC
AACTGGCAACAGAAACAAATTGTGGCCAAATGCTGTCGTTCCTTACTCAT
TGACTTCTGATTTAGGTAAGAAATTAATAATGCTATACTGTATTTTACAA
ACTTagtcactatctaagaaataagcttTAGGCCGAAGGAAAATTCGTGA
ACGGGAATTGTTGTCGAAGCTTTACCGCAGTgcagcaatgtttttattaa
ttccttttgtttttaagtcagaaaattcagcggGGGTGGGAAAAATAGTA
ATATATTTCGCAATGAGAATTGGTTTATTCGATCATTTTTTGTGGNAAAA
CATATCATTATCAAATTTACATTtgatttttagtgattttctaTTTAGAA
tctttctcaaatatttttgaagaggcgttatgtttaggaaaacaaaacaa
agctaGTTTTATGAATTTCATTTAAGCATCGTCTTCCtacgtcttcaaaa
ataatCTGCAATAGTATCTTTAAAATCTTATTGACATTAAGCACTCACAG
GTTTTGCATAAAAAGACCAGCTGAATGCCATTCCAAATCATTCAAACATT
TTTGCATCAAAGCTGAAGTAGAGAAGAGCATAATGAAGTTAGGAACGTTG
TTGTTAGCAACTTGTTTGGCTTTTGCCAGTGGAGCNtagtgggtctgtga
gaagggggtgtataagaaaatttcaaacaaaacagAGAAAAGAAATAACA
TTTACACTAACTTTCGGAGAGGGAGTtcatttcaaagtttgatttctaaa
cACTTCCCGAAATTACAAGAACAGGGATGGTTGTAATTGGTCAAAAACTT
TCGAACTCCCCCATATTATCTCAACGAATACCCATTAAGTCCATAAAACA
TTATCCTTACAAtccaagggttgtgggttcgatcccggCCACCACCAACT
CAGCGAATGAGTACCTTGAATTGCGTAATGTGATCTAAttgtagggggcc
aagcctgggctcccgtgacatcttttttacgacctaatTTCATGGtctat
cagatggtaccaattattttcgtttattttgacttttgaaaatgagctat
ttctctaccccttatttcccccttgcagttttgcctatgagGTCACTATT
ATAGTCACAAAAAGTTTTCTGGGGCCTAATCTGCGTCCTCCCTCTAAAAA
ATACCTTGTAAtgtactgttctttggaatagactaaaaatgatTAGGTTG
TAAAAAGATGTCACCGAgaccaggcttggcccccttgTAAGTTACTTTGG
GCTGAGATTAGGTGTGTTGCTCCACCTCATCATTCCATCATTCCATAGAC
TCCCTCCTTCCCGACTTcaccgacagccaccagatacTTACTTTACTTAC
TTCTTCTTTTTACTCATTGAATATAGCCCGTGATGGAAAATTCATGCGTG
AATTTCAACATTCGATCGATCAATATCACAAATATACTTGTATTCGTTTC
AAGAGGCGATCAAATGAACGAGCTTACATCGGCTTTTACATGGGTGGAGG
GTAAGGTTTTCTTTACCTCTACGTTTATGCCCTTTACGCCCTTTACGTTA
CGGTGCGCCAAATATTTAGAAAACGTCATTTCAACGCCGTTTTTCTCGAG
TAACGTTGAGAAATCCACTAAAAAGTCCTCTTTATcgttttcgagagctt
tcgagtAGTACAAGTAGTTTTGGGTTCTAGCGActttgaattttattaaa
ttccGAGCCCCAAGGGGTTTTGCTTGTGACGTTAGTCTTTTACCTATAAA
AGGATTTGATTACTCCCTCTCAAACAAGTTTTTAAGTATGTTCTTCTTTC
GAATGTGcccttccagaaaatgtccgtacatggggggtggaggatatagt
gtccgggggatAGTGTGAAATCTACATATTtaccttgtccggggggttag
acctgctgtccgggggtcaaaagtcatgatgtccgggggtaaatttccaa
aaatgttatatcctctaCCCCttccccccatattcaaattatttctagaA
AAGTCCAATGAGCTAAAATCAAATCCACTCTGGAGATTGTTGTTGCTGAT
CCTTAAGAATAGCCCCTTACTATAACGAAAAGTTTAGAAAGTTTGGACCA
GATTTGTCTTGCCATGCAGTAAACACAAACACGATTTGCGTACTAATTGT
GTTTTCTATTTTAGTTGTTCGTCACCAGTCGGTTATACCGGCGGCAGAAA
TAGGGTTTCGTTATCCAAAGGATGTCATTGGAGATCAACCATCATGCATG
AAATCGGTCACAGTTTAGGTAAGTAAAAATTTACGAAATTGTCACACAGG
CTAGAACTCTTCAGGAAAAATAAAGTTAGATACNGAAATAGGGTTTCGTT
ATCCAAAGGATGTCATTGGAGATCAACCATCATGCATGAAATCGGTCACA
GTTTAGGTAAGTAAAAATTTACGAAATTGTCACACAGGCTAGAAATCTTC
AGGGAAACAAAAGTTAGATGCATGTACAATTAATGTTTCAACGTTTGCGT
TTGTAGGAGTAAAACCTTTTATTTAAGAATTTTTACTAGGATTTCCGTCT
AAATTGTAAGCTTTagaaaagcaaaaatataatgcataaaaatttttgtc
tgactttgaagtttttttatccATATTCATCAAAAGCTTCTTGATTTATT
TCCATATTCCAAAGTAAAGACAAAGTTTAAACTTTTATATGGGTTTCATC
CTTAAGTCTATGCCGTGCAAAGTTGAATGTTCTTTTCCTCGGTTAATTTG
GTAATTTGGTATTTTTCTGAACCAGATAAAACTtaaaagaaagatgaaaa
ataaaaacaaaatgttgTACTCTTTATCTTCTTGTCATTACAATAAACGt
ttcttttaagaaacacacttttaagaaacacgagactcagaatgcctaaa
aactaagaattatttaagaaacatgctgaggctgagaatgagaaaataac
attttttaattcgttttttgtttaagaaccttccaatcaaaacaaatgtt
ttttttttctttgcatgaaaaaNtattttttaattcattttttgtttaag
aaccttccaatcaaaacaaatgtttttttttctttgcatgaaaaacaGGC
TGgttatttcaaaatgtttagcAACATGTAAAAAACATTTAAGGCACTAA
AGGCCGatcgatttcttaagaaacattgaggttgcttggtaaaactagtt
tcttaaaaaataatgtGTATGTCCTGTACCAAGAGTAGCATAACGAGCAT
GCAAAGCTTCTCTCACGAAACCATATGATACTGATACTAAAAGCAGATTA
GGAATAAAATAAACTGATACCAATTAACAAATAAACCAGTCAAATCCTTT
TATCATAGGTTTCCACCACGAGCAGTCACGTCCTGACAGAGACAACCACG
TCACCATTTTATTCCACAACGTCGCCAGGGGAACGGAACATAATTTCAAG
AAACAATCATACTCTACAACTGACTCAAAGGTAATTTCATACAGGAGAcc
attttgaaagtaaaaatacTGTATATTGAATCAGTTTTAAAATACCTGGA
ACCTGAATTACCTTACTTTGCTAACCATCTGAGTGAAAAGGCTAATAATA
TGTTGAAAATGAAACAACTTACTATGAAAGCCACAGtatagagtctccat
aactcgaacatctTCAACTCGAATAACtatccttaactcgaacatggTTT
CTCGCTGCTTCAGATAACAAACCCATCTCAACAAGTCtacgtaactcgaa
atttttataattcaaacaacctattcataaaaaatgtaACTAGATTAACC
AAACCCTCgggaatcaaaacaaacttcaccttcaaaatattcaataacTT
TTTGTCACCAGGGCACTCCATACGATTACAGATCAATGATGCATTACTCA
TGGGACGCATTCGGTTCCGGCAAAATGACCATTCAGACAAAAGATCCCAG
CATGCAATACGAGATCGGTATTGGACAAGGCGATCAGGGATTCAGTGATA
TTGATATCAAACAATTGAATTTACTCTACGGATGTTGTAAGTTTTTTCAG
TAATTATCTTAGACTGGCAcaccagtcgggctggaacggtatcacgcggg
aaaattgagtgtaggagttaggtaagcgtaggcaGAAATTGGTTACTAAA
TTTTTTCGCACTGAAGAATCAATATTAAATACTAAGGTTGGCTACACATT
CAATAGAAGTTCTCCTGAATTaacgattttcatttttttagcaCAAAGCA
ACGAAAGATTACCACCCTACACAGCACCATCCAAAGGTTCGTTTCTCATA
AATTTATTAAGTCGCTGCTATTTACAAACTAcattatacacgctttttta
taagaatttccaTAAGAACAGTTTTAAAGGAACATGAGATTCAATTGTTg
accaaaattctaaaaatttatcaagaatAATCCAATCCTTTAGATTAAAC
CAGAGAATGGGCTCTTCAAGAAAAtatccgtacatgggggtggaggatat
agtgtccgggggtagtgaaaaatctacaaaacttgccttgtccgggggNN
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NNNNNNNNNNNNNNNgccttacttgggggtaattgacaatttataattgg
aaatgctctaaaaatggcattcttcgcttgagtagcaaaattccatgata
gtGGATATTCTTAGTCGTATTCTTAATTATTTAGCTATTTTCATCATGGG
cattataaagtgtattcttattaaaaaacgcgTGTAGTCTCGTGGAATAA
TCTTAGCTCTTAAATCTTTTACGATACAGAGTGTCACGATTTGAGAGGTT
GTGCTTCACAAGTCCATGAAGGAAATTGTCAGTCAAGTTCTTGGCAAACT
TACCTTCGAAAACATTGTAGAAAGAGTTGTGGATTCTGTAAAGTTACTGG
AGGACCAAATACGCCAAAACCATGGACACCCGGACCTGATACACCACGCC
CAAACACGCCCAAGCCATGGACACCAAAACCAGACACGCCACGCCCTGGA
AGTAAGGGTTCTCTTTAGCCTGCTATTCATTTTGACAAACGTAAAACAAA
TCTTAGGTACTTTACTCGGGCCCCGTACTATAATCTACTTCAGGCACCAT
TTctaaagaaacttttttgacttactTTTAAACTTTGAGTATATGAATAA
AAATGGGCTCAACTTtagtattttttattcattagtAGACCTAATTGTAA
AACTGATAAGCGAAGTCCAATAAAAAAGcctcattttgatgaaaaacttg
TTCCCAGGTcccaaaaaatctaaattttcaaaaatgaaaaaaacaccctc
aGATATTCACCCCAACAAGTGggccaaatttcagccgaaacccaatcatt
tttgaagtctcaagTCTACCCCCAAAGCTTCAGTCTCGTTTTGGAGATAA
AACtcatgaccacgcccttaaaaatgaatgttttgtaaaagtgaaaaatc
caaccatttttgaagtctccagcctaccccaaagttttcggacagacata
cagattctagctcaactgaagttgagaaataataaaataaatagaTTCAA
TTTATTCCAATGATGTATATCTTAAACTTTCAGATTGTTACGACCGTGTG
ATTGATTGTTACAAATTGGGACGACACCAATGCAACAGTTCCAGTTCTGC
ATGGAGAAATTACATGCGACGTAGCTGCAGACGTTATTGTAACCTTTGTT
AAAAGATTCTAAATTGAAAAAGTACGCATATACAAAGTTTAAATACAAGC
GTCTTTTGAATTCTCAATAGACCTCTTCATAAactacgtcacgaacatca
cttgcctcgttttgaaattattccaTCGTGATTAtgtcccagcggatttt
attaaaactacttcctattcataaaaaataatttaatgtttcaagagaca
taatcaccatggtaattgtttgaatgcgaggcaagtgatgttcgtgacat
aatttatgaaaattatcTATTCTCtgtaattaattaattaagtTATAGCC
AAAAACTTAGACTGCAATCAACCTACGAGACCCTCCCCAAATTTAGTCAA
AAATCTAACCACTCCGTGAAAAACTGCCTGAAATTTTATCCTTGTCCAAA
AACTTCCGACTAGCCAGTTCCGTAAAAGTAATGTGGGGAAAcgctttttt
tcaaaacattgaaataattttcaaataaatttaaatctgggttgaaaaaa
aaacaggagcaataaattagaaaataaagCAGGTCAGAGAATCAACCAAG
TTTAAACAAAGAGCAGACGCTGTTTTTCCAGGAACATCTTGGCCTTCAAT
CAAATTGCATAAGAACAGATGAATTTTCCCAGTAGTCATGATTTAAACTC
AGAACATATATAAATTTCCAGGAGCCTGAATTTATTCAAGAACAGAtaac
tcgggtaagttatggcatgtctcaaaaactgaaaattaccataattttta
gatcgctttagtcgacagaaaatgaccaaacaaatgactgaacgtgaatg
gtactatgatgtagtttctaacctggtgtgtaacctaattgttttttcgc
tgattttcccgaaaaaccgcaaaaactgattattacgtaataatcgatga
cgtcatcaaaactaaaaattgaatttctcaagaatggtttatcaaattgt
cttcaaactttcNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
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NNNNNNNNNNNNNNNNNNNNNNNNGTCATTAAGTAAGTGGAAATGAAAAA
GCCTATTATGATGACCACCgtggaatttgaaattttggtcgggggaaagt
gcgAAAAATGCCTGTAGGTGACGAAGTTTTTCTCCGACGAATAAAAATCC
CGAATAAATAAAACCCTGCCTTTTTTTCCCGATGAGGTATGCAATATACG
AAGGAGAAATCAGTACACATTTCAAAGAAGGCTATCTTAAAATAAGATAC
TCACGGTAAAATTTGTGTCCAGAAATAAGTGGAACAGAttttaaatgaaa
caaaattgTTACTTTGCTCTGCTTTAATTGAGCGCTGAATAGAATTGTTA
TTCACCGACACAGGTCGGAATATGATTTGGGTATGTGATTTTCACGGTAG
AGAGAAAAGagtaaaatcaaaactttttatatcttcttaaaagattttca
tacgTCGAATATATTAAGTAACCCAGAATGTAATCATAGCGTACTTGTAA
ATTTATTTGCCTAGCTATGAAAACCTAAATCACACAGAGATAACACGATT
AACTTTTCACAATACAGTAGAGAGTTTGTGCATCCAAAAATGGAAATGAA
CTTATTTCCATAAACTCTCCTTtctggaaaacattttcaatttttaatta
ccTACTAAAGTAAACCTTCCAAATACATTTGCTCAACATAAACTTTTTAA
CCAGCTTGAGCCTCTGAATAAAACTTACCTTAAATGTTTCGTTTACAATT
TGAGAGCAACATTAGTTTCAATCAAAcctttaaaattataaaaaaggaTC
TGGGAACTATATGGCTTTTGTCTTGTctttaaatttcgaaaaagctAGGC
AATCGACGACAGAAACCAAAGAGATAGAGAAGAGCATGCAATAGACTGAA
GAAATCTGCGAAACCATCAACAAAATAAGCAACTATTTTCCGAGAAGTCA
AACATGAAGAAAgtaatatttttcattcaaattttgctgGTACTTGGCTC
AACCAGTTCGACCAGCGAAGTAGAAAATAAAGAAGCATCTCTAGACACGA
AAAGCAGTCCAAAAGTAAGTTCTTTGAATTTTACATTCTTCATTGTGTTA
TTAACacgtaccctgagtatcagaggttaggttttcaaagaatatattaa
tctCGGgagaccaataatataaatcttatcgcgcatgtgtcaatctaatc
actgtagaaagaatcacaGATGAAGAgcactgaatagaatctcgattcgt
cagcacagcgtcgatatatgatttcgacctgtgcttttcacggtaattaA
CACGAGCTTGGCCAGTGGGTTCGACTGACAATCCCTGCAttaataacacg
catgcgtaatctTCGTTCTTTCAGACCACACGTAGTTATttctagacgat
gctatcgtccgtatactatgttattatgatataacataattTGTATAtca
taaaacgtaatatgtttcacGGCgaatagagtctgtgtttacaaCGGCCA
CTCCCGTAAAAAAATTCCCCTATTCACGTTTGTTCCTtttttagatgaaa
ctcgtcttagactatagcatagtctaagtTATTTCCGGTGATAAACAAAG
ACAAATGAATcgctaggggtggtacagtcactttcggtcggggaatataa
aatattaaatttgtcgttcttttttgtcgttttttatggaatttgtcgtc
ccaaaataaatttcattctGAGAAAATTCTTACGGcgatccgcgaaatta
aattctcgcctaaATTCATTCTTtaaggaaaaatatttgaatggaTTAAT
TCGAGGTTGTTCTCGGAGACTTGTGAGCCGCCACTGGCTCTGTCGAGTAC
ATGCACATACACTGAAATTTAATGACTTTCATACCCACATCCACAAAATA
TCAATAGATCGTCAAAAAGGAGCAAACACACTAAAACACATATCAATCTT
ATTNATAATCTTCGTTCTTTCAGACCACACGTAGTTATttctagacgatg
ctatcgtccgtatactatgttattatgatataacataattTGTATATCAT
AAAATGTAATATGTTTCACGGCgaatagagtctgtgtttacaaCGGCCAC
TCCCGTAAAAAAATTCCCCTATTCACGTTTGTTCCTtttttagatgaaac
tcgtcttagactatagcatagtctaagtTATTTCCGGTGATAAACAAAGA
CAAATGAATcgctaggggtggtacagtcactttcggtcggggaatataaa
atattaaatttgtcgttcttttttgtcgttttttatggaatttgtcgtcc
caaaataaatttcattctGAGAAAATTCTTACGGcgatccgcgaaattaa
attctcgcctaaATTCATTCTTtaaggaaaaatatttgaatggaTTAATT
AGAGGTTGTTCTCGGAGACTTGTGAGCCGCCACTGGCTCTGTCGAGTACA
TGCACATACACTGAAATTTAATGACTTTCATACCCACATCCACAAAATAT
CAATAGATCGTCAAAAAGGAGCAAACACACTAAAACACATATCAATCTTA
TTCTATTCTTTTTCGTTAGAAATTTCACGCTCATTCATCTGCTTTCACTT
GTCGAGCGGGTCGAGACGGTCGTGATGGCTTGAACGGGCCACCTGGACGA
GATGGGGAAGATGGATGCCCGGGACGAGACGGCAGAGACGGACTACCTGG
TGTCAGAGGGCCAGAAGGTGTTCAAGGTATACAAGGCCGTCCTGGGTCAA
ATGGAACCAAAGGAGACCAAGGTGTTCCTGGAAAAGGTAAATGTGAAAGA
TTAAAGAGCAAAAGCATGTATGTAATTAATTTTAAAGTGATCAGTAAAAA
GTAAGCTGCGGGCATTCTCTCAATTATGTACGTACTTTTTTGAATGGTCC
TAAACGCATAAACGGGGGGACTCTCGAACGGGAATTTTACATACgttatc
aaaacatatcagaggatATCTTTTTGACTTACTCGCTCTCTTTTTATAAC
ACATAGAAGATTTCGTTATACTGAAAgtaatcaaataaatttcattatTA
GATGGCAATAACGGTATCAATGGAGTTCCTGGGGTAAATGGAACAAAGGG
CGAGCAAGGCCCACCTGGAAAAGGTTAGTAAAgatttcttttaatttctt
ttacatGTATAGcatttataagcaaaaaaaggttcttgatcagatataaa
aaaaacttagaaataaaatttttcttatgtATATAGCCTGATAAAGTAGA
AGACTaaactagacgatgctatcgatACCATTGGAAAAATAAACGCAGGG
AAATATGCATGCGTCTAGTTATAACGCTCATTACGGCGGTTTACGGAAAA
AAGCGGCAGTAGAATTTAGCCCTGTGTAAATGACAGGATTGTCTAAGTAT
AGACTTTCGCAAATCGTGGTAcccatgaaaatgaaatattaacGCTAATC
AGCATAAAAAGTGACAAACAACTTCTATTAAAAAAACCCATTGGTTGGAG
GGTTTTCGCGGCGAGTTATGgcatgaatttttgaaaaatatggcGTAATG
GCGTGCAAATCAAATAGCAGCGTGTTCATGTAATGGAGATCTTTAAGGTG
TTAATTCTGAGGCCAATAgctgttttctattttttttatttcagatggTT
CAATTGGTGGCAGACACTTTAAAGAATGTGCCTGGAGATTTACATCAAGT
ACAGATACTGGCTTGCTTAAGGTATGGCTTTtttcaatgttaaaaaattt
GATGTATTGATAATAACCATAGCAGAGCATATACTGGTATATCATATTAA
TGTTGTGAATCCTTTGAAAATacccaatattttttttttttctttattga
aacaaaaacacgtgtacactacgaacatatattacaaaacattacttaaa
cataagatatagtccctccccccgctaggaactaacgttatatcgccaga
ggtactagactatgtaaaaaataaataaataagtaaataaagaaaaaatc
tgtGAGAAGGAACctacaattgttaggtaaaagcctaaaataaagcaccg
ttaaaccttccagtttcgttatgaaattcaacaacagaacaaagaataga
tttatttagatttgaagNGTTAAATAATTTTTCGTATTATTTTAATTgta
tttctcatcaaaatacactaatccaattcccaaatgagactttaagttct
cctccgagattcaaactcgtctagttaattactaattatacgtcgttctg
acgttttaaatttcgagaaagatggaaaaacatgttatgtataagaaatt
gaatattgacaccagaaatttttaaacttcaacctcaaaaaaaccaccgt
gccaccacgtgccaccaaaagattttcataccacagtggagctatgagac
tcacATCTAATATATATCAATCTCAGCTTTTCtcggagaaatattggaaa
gatattcccaattcaaaatttcgtgtcattattagcattttgtttgattt
tactcatctgatgatttttttctcacaccagatttcttAAATGTATCCgt
ttggtattctagcatttattttcaaacttttggccagcaaaagtacgaat
agaaaaagttagaacactttttagaaattagagtattgatcatttttcaa
attcagagtccttcgagccgccatgacagttgtcctttgcggacaaagct
agaacatcaattgttttctgaaacaatagaaagacaatacttctCTCTCC
ACCGTTTCATTTGATGTTTATCCAGAGTCTCTATAATAAATCCATGGTAC
TACCGAAATATTGCAAATAGTGACCACATTCCTTTCACAATGAAAGGTGT
TTGCAAAATCAACAAATCAGGCATTGTGAGCATTGGATTCAACGTTGGGA
AATGTTCAGGTGGTGTTCAGCTTGGTGATGCGTTCACAGGATGGAATCAA
GAAGTGACACGTATCATTATTGAAGAGCTCTaaacaaatttcaatttctC
AAATTAGAGACGTATAATACATAATgtagaaaatggcaaaaataatattt
ttactgTGTATGAATATTCATTACATTGTCATTGAAGATATCAGTTTAAT
TCATCAGAGAACTAGTAATTTATTATGGTTGTTCAATTGAATTATATTAA
GGGTAGGCGGTGAAACCCAGGGAGAAAGATAGTATAGggtattttgtaaa
atcgctcgattgttttggtaaaagcacttgttatacatttttgaaaaact
aaggggtaggggaatcaaaattacttaggttctaattttttttcagacac
tttggtgtgatttttgaACAATAATAGTAttgtctcaggcaaaaatcata
gggtctaAAATTACTGAAAtctttagcttgagaaaacggagacttgttgt
aaatttttggaaagctctcaaaaattaagattagtgatatattgcatacc
aaaagttaaaaaatgttccagtagggcttgaaatatagcctagaaaccaa
taaatccctcccagatcgaaataatcgatgaaatcaagttgaatgcctga
aattgacattcttgcTCGAACAGAAACAGCCGTTTTGTCCACCTTTTaca
ctttttgaagctcaatatctcgagttaggtactgaaatcacctatccTCG
CAATATATctataatcttaattttttgagagctttcgaacaAACAAATTT
CTCGCTACTAAGAGGGGTGGGGCTCCCTCTCATATTCTTATGGATATTCA
AATTGATTTATACAACTTTCTTATTTCTGGAGAAACTTTCCTTGTACTCT
TTCAAGATCCTTCCACTTCTTCCTGGTGAAATGGCTTAGTTGTTCAGCTG
CTTATTAACGCCTAGACAATAGTATGCTGCCTTAAAAATGACAGCCTAAC
TAATTGAAGCTGATTTTTCACCCAACCAGAGTTTTGGTCTTTTACCATAG
TCGTTTAGGAGAATACAACtccataggcgtagcgagataccctgtaAAAT
TTATGGAtaagagcggtttttacgacactgtaattattgtctttgtctta
tcaaaagataataaaTATGTCATattaaacgtctgcactccctcataaac
tTTGCAGGCTATCTCGCTTCGCCTATGGACGGTGTAtataataacaaatt
actccacatcagaggaatgtaaagagatggaaaaactggttttccgatta
ctcaaagttcaacgatcacttctatcgaaaactctattgtaaaaacgttg
attaggtcattatatgaaagtccagaaaatacggctcgccatacaaatcg
gacggcttctacatgatttgacgataaaaatgaaaattagtttttccttt
ttttccgatTACTAgttgaatttttaagaataaagagcaatatttttacc
aatgtatagaaaaataaattcttaacgcaatgatattaaattagttcttg
taaaatcaagatgaagttaccTCTGAGTTACCTcgacttttctaaaaaaa
atacagcagtcaattgactttttaattttggtgtttggttttgtttttct
aCATCTGTGATGTGATACGTGTGACACAGAGCTTGGCACTCTTCCCCGAA
CAagaccgagtttatgtatgtgtgtttttctacaAGGTTTTAaattgact
agatcctgaccaatcgaggacgacggtaaatcagcacttttaccgtcctt
gatTTTGCAGGTCATAACTGCAGGCTATTCCAAAtcacttcagtcactct
accgtcctcgaaagtgtaaatacataaactcgctaaggatatcgagggcg
acggtgtGCTAAAAAAAGTCGATAGATGATGTatggctctatatcgcctt
tgctcctattttggtatttttaccgtcgtcgagtaTAGTGGACGTTGATt
taatcagcacttttaccgtccttgatTTTGCAGGTCATAACTGCAGGCTA
TTCCAAATCACTTCAGTCAATCTACCGTCCTCGAAAGtgtaaatacataa
actcgctaaggatatcgagggcgacggtgtGCTAAAAAAAGTCGATAGAT
GATGTatggctctatatcgcctttgctcctattttggtatttttaccgtc
gtcgagtaTAGTGGACGTTGATTTTGGCGACATGTCAACTCGAATTCTCG
CTAAAGTTGAACATGGAGGGTTTTATTGCCGATGGAAACTATCTTAAAGT
ATGGAACTTTGGGTTGGCAGGTATTACCTCAACATTTTAACACCTGGAAA
AGTGCCATGATATTTTCAACGTGGAAGATGGAAGAAAGCCGAGGCACACT
AGAATATTGTAACATTTGTGTCAGTATTTCACTTCTAATATTTTGACATA
ACAAATGTCCTACATGGAATAGTAATTATTTATGACGAACTCGGTTTCAG
AATTTAGACTTATTTTTGTATGTGTGTGTGTGGGAAGTTCAATGTACAAA
CATACTAGTAAGCGTGTGCAAAATCATCACGCAAACTTGCTTCCTCAAAC
AATCTCACAAATTGAATCAATAAACATATCATTATCAAATTTACATTTAA
TTTTTAGTGAATTTCTATTTAGAAcctttctcaaatatttttgaagaatc
gttatgtttaggaaaacaaaacaaagctagttttatgaattttatttaAG
CATCGTCTTccttcattgaaaaaattttgcaatagtatttttaaaatctt
attGACATCAAGCACTCACAGGTTTTGCATAAAAAGACCAGCTAAATGCC
ATTCCAAATCATTCAAACATTTTTGCATCAAAGTTGAAGTAGAGAAGAGC
ATAATGAGGTTAGGAACGTTGTGGTTAGCAACTTGTTTGGCTTTTGCCAG
TGGAGCCTGGGTACCAGAAATGGAAAGTAAGTTAAAGCAAGCTTATTGAT
TTAAGAAAATCTTTTNAGTTAGGAACGTTGTGGTTAGCAACTTGTTTGGC
TTTTGCCAGTGGAGCCTGGGTACCAGAAATGGAAAGTAAGTTAAAGCAAG
CTTATTGgtttaagaaaatcttttacatttttcagaTCATTTGGCGCATT
Gggcttttttaaaataaatttgaatatgggggggtgattgatataacatt
ttttagaaattaacCCCcaggacattgtgaattttgacccccggacaagc
atcagttgaccccctggacattgaaAATAACCCCCACACAGAGCAAGTTT
ATTCCCGGGACAGGGCAaactttgtagatttttcactaatttttggATTT
GAGCATCCTGTCTCCGTGTAACTGATCAATTTCAATTGACTTGTTAAATT
ATCAACTGTAACAACGGTCTTCCTATTCTTTCATATCATTTTAGACGAAG
GTCTTTACGAAGGAGACATGATTTTAGATCCTGACCAGCAGAAGGAGGTC
GAAGATGGAACTTTCACTTTCTCATCAACTNAATGATCcttgtttcagtg
gtcagaaataaaattggtacaccataaaaccgctttatggtagaaatagg
tccaaaaacgataaaaatcgcctaaaatggccatttttaccccctggttt
gtccatttgcaccctggttttgttagttttaagtNAACTGGCAACAGAAA
CAAATTGTGGCCAAATGCTGTCGTTCCTTACTCATTGACTTCTGATTTAG
GTAAGAAATTAATAACGCTATACTGTATTTTACAAACTTagtcactatct
aagaaataagctcTAGGCCGAAGGAAAATTCGTGAATGGGAGTTGTTGTC
GAAGCTTTACCGCAGCGCAGCAATGTTTNCGAAAATCAAGttaaactatt
tttgatgacgttttaacaaagattagtggtgaaaattgctcaaataaggt
aaaaacccataaaaatgggcaattttaccccctgNTGGGAAAAATATATT
TGGTCCATTttgggaagctctgaatagcaatatagtggaatctcaaagca
aaaactgacaaaattacgtcaaataaaTGTCATCATTTGGCCATAANTAA
TACTGtctgtttgaattttttctgatgtattgcatcaaagtctatAATAA
CAATTAGTTTGTGTCTCAtcaaaagttgtttgggtaggtcccagacttaa
aaagggtcaaaatttagttaaaatacccaaattttccctttttttcccca
ggcaaacctataaaaatagtttttcacaaaaattttttgccgaaaataat
taacagcctaccttgaaactttttgcaaagtttcaaagcaattggtcaac
tgattgactagatacagcaaattatattATCCCTGGgatggcattttcct
taacaaatccttaaaaagggtaaaaagtaccccctaaactcgggcccagt
ttgaaaaattgaccaggagttagctttggggaccgaccatttccaaaact
aggatagttgaggattccaaaaatttatagtttatcctgtagaatcttgg
gttaagcaaaatgccattttttgggtttggTTCCCGGACtaaatagacta
aaaatgattaggtcgtaaaaaagagACCAGGCTTGGCCCCCCCCCTGTAA
GTTACTTTACACGGCGATCTTTCATTGGActaatcggattcaaaatttct
tgttttagtcaaattttaggaaattgacTGAGgtaaaatgctttcttttt
cttttatcctttagagggcAAATAAAagtacattctgtgaaaatttcaag
tctctagcactttcctatccggaattatcttgattccgatttagagggat
ctcaaccgggatgaggacgggatagagggatatctcgaaaacgaaagtgc
tcaGTAACTGTCAACagtttgatgtatcaaaaaactttttctcctACTTT
TACACTCCCTACAAGGAGACTTAAAATACCAAATCTCATTTCTTTATGAG
CACTACTTTAGGAGATAAAAAgcaaattagccaaaataatcccgatttta
caaaagttccaatgaaagatcactgtgTTAGACTGAGATTAGGTGTGGTG
CTCTACCTCATCATTCCATCATTCCATAGACTTCCTCCTTCCCGACTTca
ccgacagccaccagatacttattttcttctttttactcATTGAATATAGC
CCGTGATTCATGCGTGAATTTCAACATTCGATCGATCAATATCACAAATA
TACTTGTATTCGCTTCAAGAGGCGATCAAATGAACGAGCTTACATCGGCT
TTTACATGGGTGGAGGGTAAGTTTTTCTTTACCTCTAAGTTCACGCCCTT
TACGCCCTTTATGGTGCTCCAATCATTTAGAAAACGTCATTTCAACGCTG
TTTTTCTCGAGTGACGTTGAGAAATCGACCATGTCCACTAAAAAGTCCTC
TATATcgttttcgagagctttcgagtAGTACGAGTAGTAGGGTTCTAGCG
ActttgaattttattaaattccGAGTCCCAAGGGGTTTTGCTTGTGACGT
TAGTCTTTTACCCATAGAAGGATTTGATTACTCCCTCTCAAACAAGTTTT
TAAGTACGTTCTTCTTTCGAATgcgcttttccagaaaatgtccgtacatg
ggggtggaggatacaGTGTCCAGGGGATAGCGGAAAATCTACAAATTTGC
CTTATCCGGGGGGTAAAATTGCTCTGTTTGAGGTTGATTTTGAATGttca
gggggtcaactgatgttgttcggggggttagacctgctgtccgggggtaa
aaagtaaTGATGTCCGGGGgtagatttccaaaaaaatgctaTATCCTCTA
TCCCCTCCCCATATTTAAATACATTCTTCTTTCGAATGAGCTAAAATCAA
ATCCACTCTGGAGATAGTTGTTGCTGATACTAAGAATAGCTTATACAACA
AAAAGTTAAGAAAGTTTGGCCCAGATTTGTCTTGACGATGCAGCAAACAC
TGTATCACATTCACGATTTGCGTATGAATTCTGTCTTTCTATTTTAGTTG
TTCGTCACCAGTCGGTTATACCGGCGGCAGAAATAGGGTTTCGTTATCCA
AAGGATGTCATTGGAGATCAACCATCATGCATGAAATCGGTCACAGTTTA
GGCAAGTAAAAATTTACGAAATTGTCACACAGGCTAGAAATCTTCAGGAA
AAATAAAGTTAGATACATGTACAATCAATGTTTCAACTTTTTCGTTTGTA
GGAGAAAAACGTCATTTAAGAATTTTCACTAGGATTTCCGTCCAAACTGT
AAGCTTTtgaaaagcaaaaatataatgTGTAAAAACTTTGTCtgactttg
aagtttttttatccATATTCACCAAAAGCTTCTTGATTTATTTCCATATT
CCAAAGTCAAGACAAAGTTTAAACTTTTATATGGGTTTGATCCTTAAGTC
TATGCTGTGCAAAGTTGAATGTTCTTTTCCTCGGTTAATTTGGTAATgtt
ctgtaaaaatatttttttgaaccaGATAAAACTTAAAAGAAAGATGAAAA
ATAAAAACAAAATGTTTTAAACCCTTTATCTTCTTGTCGTTACAATAAAC
GTTTTTTTTAAGAAACACACTTTTAAGAAACACGAGACTCAGAATGCCTA
AAAACTAAGAAACATTTAAGAAACATGCTGAGGCTGAGAATGAGAAAATA
ACATTTTTAATTCGTTTTTTAAAAAGAACCTTTCAATCAAAACAAATGTT
TTTTTTTTCTTTGCATGAAAAACGGGCTGATTATATGAAAAAGTTTAAAA
ACATGTAAAAAACATTTAAAGCACAAAAGGCCGATTTCTTAAGAAACATT
GAGGCTGCTTGGTAAAACTAGTTTCTTAAAAGAAAACGTGTACTTTCTGT
ACCAAGTAAAGCATAACGAGAAAGCCTCTCTCACGAGACCATATGATACC
GTCTCAAATCGTCTGATAATTTGTAGAAAACCTAAAAGCAGATTAGGAAT
AAAATAAACTGTTACCAATTAACAAATAAACCAATCAAATCTTTTATCAT
ACGTTTCCACCACGAGCAGTCATGTCCTGACAGAGACAACCACGTCACCA
TTTTATTCCACAACGTCGCCAGGGGAACGGAACATAATTTCAAGAAACAA
TCATACTCTACAATTGACTCAAAGGTAATTTCATACAGGAGATAATTTTG
AAAGTGAAAATACTGTACATTGAATCAGTTTTTTAACACCTGAAACCTCA
ATTACCTTACTTTACTAAGCATCTGAGTGAAAAGACTAATATGTTGAAAA
TGAAACAACTTACTATGAAAGCCCTTTCTACAGtatagagtctccataac
tcgaacatctTCAGCTCGAATAACTATCCTTAACTCTAACATGGTTTCTC
GCAGCTTCAGATAACAAACCCATCTCAACAAGTCtacgtaactcgaaatt
tccataattcaAACAACCtagtcataaaaaatatttctaatataCATTTA
ACTATATTAACCTAACCCTCgggaatcaaaacaaacttcactttcaaaat
gttcaaTAATTTTTGTCAACAGGGCACTCCATACGATTACAGATCAATGA
TGCATTACTCATGGGACGCATTCGGT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_020579XLOC_020579Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00035267-exon-sc0001279-1491911889:17611..17653TCONS_00035267-exon-sc0001279-1491911889:17611..17653Clytia hemisphaericaexon
TCONS_00035267-exon-sc0001279-1510915933:17611..17653TCONS_00035267-exon-sc0001279-1510915933:17611..17653Clytia hemisphaericaexon
TCONS_00035267-exon-sc0001279-1575043694:17611..17653TCONS_00035267-exon-sc0001279-1575043694:17611..17653Clytia hemisphaericaexon
TCONS_00035267-exon-sc0001279-1491911889:18029..18175TCONS_00035267-exon-sc0001279-1491911889:18029..18175Clytia hemisphaericaexon
TCONS_00035267-exon-sc0001279-1510915933:18029..18175TCONS_00035267-exon-sc0001279-1510915933:18029..18175Clytia hemisphaericaexon
TCONS_00035267-exon-sc0001279-1575043694:18029..18175TCONS_00035267-exon-sc0001279-1575043694:18029..18175Clytia hemisphaericaexon
TCONS_00035267-exon-sc0001279-1491911889:19487..19610TCONS_00035267-exon-sc0001279-1491911889:19487..19610Clytia hemisphaericaexon
TCONS_00035267-exon-sc0001279-1510915933:19487..19610TCONS_00035267-exon-sc0001279-1510915933:19487..19610Clytia hemisphaericaexon
TCONS_00035267-exon-sc0001279-1575043694:19487..19610TCONS_00035267-exon-sc0001279-1575043694:19487..19610Clytia hemisphaericaexon
TCONS_00035267-exon-sc0001279-1491911889:20275..20378TCONS_00035267-exon-sc0001279-1491911889:20275..20378Clytia hemisphaericaexon
TCONS_00035267-exon-sc0001279-1510915933:20275..20378TCONS_00035267-exon-sc0001279-1510915933:20275..20378Clytia hemisphaericaexon
TCONS_00035267-exon-sc0001279-1575043694:20275..20378TCONS_00035267-exon-sc0001279-1575043694:20275..20378Clytia hemisphaericaexon
TCONS_00035267-exon-sc0001279-1491911889:21469..21590TCONS_00035267-exon-sc0001279-1491911889:21469..21590Clytia hemisphaericaexon
TCONS_00035267-exon-sc0001279-1510915933:21469..21590TCONS_00035267-exon-sc0001279-1510915933:21469..21590Clytia hemisphaericaexon
TCONS_00035267-exon-sc0001279-1575043694:21469..21590TCONS_00035267-exon-sc0001279-1575043694:21469..21590Clytia hemisphaericaexon
TCONS_00035267-exon-sc0001279-1491911889:43283..43336TCONS_00035267-exon-sc0001279-1491911889:43283..43336Clytia hemisphaericaexon
TCONS_00035267-exon-sc0001279-1510915933:43283..43336TCONS_00035267-exon-sc0001279-1510915933:43283..43336Clytia hemisphaericaexon
TCONS_00035267-exon-sc0001279-1575043694:43283..43336TCONS_00035267-exon-sc0001279-1575043694:43283..43336Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0001279supercontigsc0001279:17611..43336 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0	0	0	0	0	0	7.80148e-08	1.3778	1.27943	0.000523815	0.000224491	0	0	0	0	0	0	0.444206	6.53366	16.5875	0	0	2.02601	5.7093	133.094	140.008	0.0278411	0	0.902856	0
Blast
[Close]
BLAST of TCONS_00035267 vs. Swiss-Prot (Human)
Match: TLL1 (Tolloid-like protein 1 OS=Homo sapiens GN=TLL1 PE=1 SV=1)

HSP 1 Score: 124.02 bits (310), Expect = 4.588e-32
Identity = 62/159 (38.99%), Postives = 93/159 (58.49%), Query Frame = 1 
Query:  121 SSTGNRNKLWPNAVVPYSLTSDLARDGKFMREFQHSIDQYHKYTCIRFKRRSNERAYIGF-YMGGGCSSPVGYTG-GRNRVSLSKGCHWRSTIMHEIGHSLGFHHEQSRPDRDNHVTILFHNVARGTEHNFKKQSYSTTDSKGTPYDYRSMMHYSWDAF 591
            ++T    ++WP  V+PY +  +     + M  F+ ++  + K+TC+ F  RS+E +YI F Y   GC S VG  G G   +S+ K C     ++HE+GH +GF HE +RPDRDNHVTI+  N+  G E+NF K      +S G  YD+ S+MHY+ + F
Sbjct:  148 AATSRTERIWPGGVIPYVIGGNFTGSQRAM--FKQAMRHWEKHTCVTFIERSDEESYIVFTYRPCGCCSYVGRRGNGPQAISIGKNCDKFGIVVHELGHVIGFWHEHTRPDRDNHVTIIRENIQPGQEYNFLKMEPGEVNSLGERYDFDSIMHYARNTF 304
The following BLAST results are available for this feature:
BLAST of TCONS_00035267 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
TLL14.588e-3238.99Tolloid-like protein 1 OS=Homo sapiens GN=TLL1 PE=... [more]
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